RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 C8orf49Q96NF6 230 aa14.69□□□□□ -0.06
HOXC6-202ENST00000394331 ZFHX4Q86UP3 3567 aa14.68□□□□□ -0.06
HOXC6-202ENST00000394331 IGLV2-18A0A075B6J9 118 aa14.68□□□□□ -0.06
HOXC6-202ENST00000394331 TRAV12-1A0A0B4J245 112 aa14.68□□□□□ -0.06
HOXC6-202ENST00000394331 SMIM20Q8N5G0 67 aa14.68□□□□□ -0.06
HOXC6-202ENST00000394331 ENSAO43768 121 aaKnown RBP14.67□□□□□ -0.06
HOXC6-202ENST00000394331 LYZP61626 148 aa14.67□□□□□ -0.06
HOXC6-202ENST00000394331 GAGE2BQ13066 116 aa14.67□□□□□ -0.06
HOXC6-202ENST00000394331 GAGE2EQ4V326 116 aa14.67□□□□□ -0.06
HOXC6-202ENST00000394331 MYOZ3Q8TDC0 251 aa14.67□□□□□ -0.06
HOXC6-202ENST00000394331 FBXL15Q9H469 300 aa14.67□□□□□ -0.06
HOXC6-202ENST00000394331 GAGE2DQ9UEU5 116 aa14.67□□□□□ -0.06
HOXC6-202ENST00000394331 CFAP47Q6ZTR5 3102 aa14.67□□□□□ -0.06
HOXC6-202ENST00000394331 OR11H6Q8NGC7 330 aa14.67□□□□□ -0.06
HOXC6-202ENST00000394331 SHANK2-AS3Q9BTD1 123 aa14.67□□□□□ -0.06
HOXC6-202ENST00000394331 LINC01549A6NIU2 74 aa14.66□□□□□ -0.06
HOXC6-202ENST00000394331 PTH2Q96A98 100 aa14.66□□□□□ -0.06
HOXC6-202ENST00000394331 B9A039 149 aa14.65□□□□□ -0.06
HOXC6-202ENST00000394331 H3BRN7 92 aa14.65□□□□□ -0.06
HOXC6-202ENST00000394331 BRI3O95415 125 aa14.65□□□□□ -0.06
HOXC6-202ENST00000394331 PDE6HQ13956 83 aa14.65□□□□□ -0.06
HOXC6-202ENST00000394331 TPSG1Q9NRR2 321 aa14.65□□□□□ -0.06
HOXC6-202ENST00000394331 CUL9Q8IWT3 2517 aa14.65□□□□□ -0.06
HOXC6-202ENST00000394331 IFITM1P13164 125 aa14.65□□□□□ -0.06
HOXC6-202ENST00000394331 NBL1P41271 181 aa14.65□□□□□ -0.06
HOXC6-202ENST00000394331 LGALS1P09382 135 aaKnown RBP14.65□□□□□ -0.06
HOXC6-202ENST00000394331 RPL27AP46776 148 aaKnown RBP14.65□□□□□ -0.06
HOXC6-202ENST00000394331 MRGPRG-AS1Q2M3A8 158 aa14.65□□□□□ -0.06
HOXC6-202ENST00000394331 CEP250Q9BV73 2442 aa14.64□□□□□ -0.07
HOXC6-202ENST00000394331 TMSB15BA0A087X1C1 80 aa14.64□□□□□ -0.07
HOXC6-202ENST00000394331 F8VRH5 84 aa14.64□□□□□ -0.07
HOXC6-202ENST00000394331 H7C1H1 209 aa14.64□□□□□ -0.07
HOXC6-202ENST00000394331 MRPS12O15235 138 aaKnown RBP14.64□□□□□ -0.07
HOXC6-202ENST00000394331 CNIH1O95406 144 aa14.64□□□□□ -0.07
HOXC6-202ENST00000394331 PRR30Q53SZ7 412 aaPredicted RBP14.64□□□□□ -0.07
HOXC6-202ENST00000394331 ANKRD29Q8N6D5 301 aa14.64□□□□□ -0.07
HOXC6-202ENST00000394331 AJUBAQ96IF1 538 aa14.64□□□□□ -0.07
HOXC6-202ENST00000394331 ASPMQ8IZT6 3477 aa14.64□□□□□ -0.07
HOXC6-202ENST00000394331 IGHV3-72A0A0B4J1Y9 119 aa14.63□□□□□ -0.07
HOXC6-202ENST00000394331 SNCGO76070 127 aa14.63□□□□□ -0.07
HOXC6-202ENST00000394331 CLEC3BP05452 202 aa14.63□□□□□ -0.07
HOXC6-202ENST00000394331 CD3EP07766 207 aa14.63□□□□□ -0.07
HOXC6-202ENST00000394331 ZGRF1Q86YA3 2104 aa14.63□□□□□ -0.07
HOXC6-202ENST00000394331 MAP1BP46821 2468 aaKnown RBP14.63□□□□□ -0.07
HOXC6-202ENST00000394331 LOC107984156A0A0G2JMH3 177 aa14.63□□□□□ -0.07
HOXC6-202ENST00000394331 CCDC179H3BU77 68 aa14.63□□□□□ -0.07
HOXC6-202ENST00000394331 ZFP2Q6ZN57 461 aa14.63□□□□□ -0.07
HOXC6-202ENST00000394331 ARL17AQ8IVW1 177 aa14.63□□□□□ -0.07
HOXC6-202ENST00000394331 ASCL2Q99929 193 aa14.63□□□□□ -0.07
HOXC6-202ENST00000394331 NAV3Q8IVL0 2385 aa14.63□□□□□ -0.07
HOXC6-202ENST00000394331 HCP5Q6MZN7 132 aa14.62□□□□□ -0.07
HOXC6-202ENST00000394331 PSMG3-AS1Q96PY0 264 aa14.62□□□□□ -0.07
HOXC6-202ENST00000394331 CD7P09564 240 aa14.62□□□□□ -0.07
HOXC6-202ENST00000394331 EGR2P11161 476 aaPredicted RBP14.62□□□□□ -0.07
HOXC6-202ENST00000394331 LAGE3Q14657 143 aa14.62□□□□□ -0.07
HOXC6-202ENST00000394331 C17orf77Q96MU5 243 aa14.62□□□□□ -0.07
HOXC6-202ENST00000394331 VKORC1Q9BQB6 163 aa14.62□□□□□ -0.07
HOXC6-202ENST00000394331 ROS1P08922 2347 aa14.62□□□□□ -0.07
HOXC6-202ENST00000394331 IGLV1-47P01700 117 aa14.62□□□□□ -0.07
HOXC6-202ENST00000394331 CRYGBP07316 175 aa14.62□□□□□ -0.07
HOXC6-202ENST00000394331 ARL3P36405 182 aa14.62□□□□□ -0.07
HOXC6-202ENST00000394331 TTC32Q5I0X7 151 aa14.62□□□□□ -0.07
HOXC6-202ENST00000394331 TCL1BO95988 128 aa14.61□□□□□ -0.07
HOXC6-202ENST00000394331 TMEM78Q5T7P6 136 aa14.61□□□□□ -0.07
HOXC6-202ENST00000394331 SIGLEC9Q9Y336 463 aa14.61□□□□□ -0.07
HOXC6-202ENST00000394331 RIF1Q5UIP0 2472 aaKnown RBP14.6□□□□□ -0.07
HOXC6-202ENST00000394331 BOD1L1Q8NFC6 3051 aa14.6□□□□□ -0.07
HOXC6-202ENST00000394331 LINC01600Q96MT4 127 aa14.6□□□□□ -0.07
HOXC6-202ENST00000394331 RASL11BQ9BPW5 248 aa14.6□□□□□ -0.07
HOXC6-202ENST00000394331 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.6□□□□□ -0.07
HOXC6-202ENST00000394331 PPP1R27Q86WC6 154 aa14.6□□□□□ -0.07
HOXC6-202ENST00000394331 AAMDCQ9H7C9 122 aa14.6□□□□□ -0.07
HOXC6-202ENST00000394331 IGHV1-3A0A0C4DH29 117 aa14.59□□□□□ -0.07
HOXC6-202ENST00000394331 NDUFA3O95167 84 aa14.59□□□□□ -0.07
HOXC6-202ENST00000394331 ZNF575Q86XF7 245 aa14.59□□□□□ -0.07
HOXC6-202ENST00000394331 KIR2DL4Q99706 377 aa14.59□□□□□ -0.07
HOXC6-202ENST00000394331 HIF1ANQ9NWT6 349 aa14.59□□□□□ -0.07
HOXC6-202ENST00000394331 DMXL1Q9Y485 3027 aa14.59□□□□□ -0.07
HOXC6-202ENST00000394331 BUB1B-PAK6H3BSN5 160 aa14.59□□□□□ -0.07
HOXC6-202ENST00000394331 GAS8-AS1O95177 125 aa14.59□□□□□ -0.07
HOXC6-202ENST00000394331 PRR25Q96S07 402 aa14.59□□□□□ -0.07
HOXC6-202ENST00000394331 LINC01548A6NM66 108 aa14.59□□□□□ -0.07
HOXC6-202ENST00000394331 NDUFA11Q86Y39 141 aa14.59□□□□□ -0.07
HOXC6-202ENST00000394331 SCGB1C2P0DMR2 95 aa14.58□□□□□ -0.08
HOXC6-202ENST00000394331 ZNF292O60281 2723 aa14.58□□□□□ -0.08
HOXC6-202ENST00000394331 M0R3E3 92 aa14.58□□□□□ -0.08
HOXC6-202ENST00000394331 ACACAQ13085 2346 aa14.57□□□□□ -0.08
HOXC6-202ENST00000394331 CNTFRP26992 372 aa14.57□□□□□ -0.08
HOXC6-202ENST00000394331 RAXQ9Y2V3 346 aa14.57□□□□□ -0.08
HOXC6-202ENST00000394331 K7ENP7 123 aa14.57□□□□□ -0.08
HOXC6-202ENST00000394331 RNF5Q99942 180 aa14.57□□□□□ -0.08
HOXC6-202ENST00000394331 MGAQ8IWI9 3026 aa14.57□□□□□ -0.08
HOXC6-202ENST00000394331 PKDREJQ9NTG1 2253 aa14.56□□□□□ -0.08
HOXC6-202ENST00000394331 TRAV4A0A0B4J268 109 aa14.56□□□□□ -0.08
HOXC6-202ENST00000394331 IGKV1-17P01599 117 aa14.56□□□□□ -0.08
HOXC6-202ENST00000394331 IL17RELQ6ZVW7 336 aa14.56□□□□□ -0.08
HOXC6-202ENST00000394331 TMEM126AQ9H061 195 aa14.56□□□□□ -0.08
HOXC6-202ENST00000394331 MSRB1Q9NZV6 116 aa14.56□□□□□ -0.08
HOXC6-202ENST00000394331 MDFICQ9P1T7 246 aa14.56□□□□□ -0.08
HOXC6-202ENST00000394331 I3L2K1 104 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms