RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 LINC00322Q6ZN03 302 aaPredicted RBP17.89■□□□□ 0.45
LRFN4-202ENST00000393952 TRPT1Q86TN4 253 aaKnown RBP17.89■□□□□ 0.45
LRFN4-202ENST00000393952 M0R2Z0 102 aa17.88■□□□□ 0.45
LRFN4-202ENST00000393952 LEPP41159 167 aa17.88■□□□□ 0.45
LRFN4-202ENST00000393952 CRIP1P50238 77 aa17.88■□□□□ 0.45
LRFN4-202ENST00000393952 SNAPINO95295 136 aa17.87■□□□□ 0.45
LRFN4-202ENST00000393952 FXYD7P58549 80 aa17.87■□□□□ 0.45
LRFN4-202ENST00000393952 SPINK13Q1W4C9 94 aa17.87■□□□□ 0.45
LRFN4-202ENST00000393952 CLUHP3Q96NS8 147 aa17.87■□□□□ 0.45
LRFN4-202ENST00000393952 ATRAIDQ6UW56 229 aa17.87■□□□□ 0.45
LRFN4-202ENST00000393952 RNASE7Q9H1E1 156 aaKnown RBP17.87■□□□□ 0.45
LRFN4-202ENST00000393952 BIN3Q9NQY0 253 aa17.87■□□□□ 0.45
LRFN4-202ENST00000393952 GPX1P07203 203 aa17.86■□□□□ 0.45
LRFN4-202ENST00000393952 TSPOP30536 169 aa17.86■□□□□ 0.45
LRFN4-202ENST00000393952 BTN1A1Q13410 526 aa17.86■□□□□ 0.45
LRFN4-202ENST00000393952 ZMAT5Q9UDW3 170 aaKnown RBP17.86■□□□□ 0.45
LRFN4-202ENST00000393952 KLLNB2CW77 178 aa17.85■□□□□ 0.45
LRFN4-202ENST00000393952 RPL35AP18077 110 aaKnown RBP17.85■□□□□ 0.45
LRFN4-202ENST00000393952 RNASE4P34096 147 aaKnown RBP17.85■□□□□ 0.45
LRFN4-202ENST00000393952 CDKN1BP46527 198 aa17.85■□□□□ 0.45
LRFN4-202ENST00000393952 SFRP2Q96HF1 295 aa17.85■□□□□ 0.45
LRFN4-202ENST00000393952 SRD5A3Q9H8P0 318 aa17.85■□□□□ 0.45
LRFN4-202ENST00000393952 MGAM2Q2M2H8 2515 aa17.84■□□□□ 0.45
LRFN4-202ENST00000393952 TRAV12-2A0A075B6T6 113 aa17.84■□□□□ 0.45
LRFN4-202ENST00000393952 C7orf77A4D0Y5 90 aa17.84■□□□□ 0.45
LRFN4-202ENST00000393952 SH2D1AO60880 128 aa17.84■□□□□ 0.45
LRFN4-202ENST00000393952 FAM162BQ5T6X4 162 aa17.84■□□□□ 0.45
LRFN4-202ENST00000393952 Q6ZQT7 251 aa17.84■□□□□ 0.45
LRFN4-202ENST00000393952 C19orf71A6NCJ1 209 aa17.83■□□□□ 0.45
LRFN4-202ENST00000393952 B4DEV8 164 aa17.83■□□□□ 0.45
LRFN4-202ENST00000393952 ERVFC1-1P60608 527 aa17.83■□□□□ 0.45
LRFN4-202ENST00000393952 RNF212Q495C1 297 aa17.83■□□□□ 0.45
LRFN4-202ENST00000393952 RHEBQ15382 184 aa17.83■□□□□ 0.44
LRFN4-202ENST00000393952 IBA57Q5T440 356 aaKnown RBP17.83■□□□□ 0.44
LRFN4-202ENST00000393952 GFI1BQ5VTD9 330 aa17.83■□□□□ 0.44
LRFN4-202ENST00000393952 NUDT10Q8NFP7 164 aa17.83■□□□□ 0.44
LRFN4-202ENST00000393952 NUDT11Q96G61 164 aa17.83■□□□□ 0.44
LRFN4-202ENST00000393952 NOTCH1P46531 2555 aa17.82■□□□□ 0.44
LRFN4-202ENST00000393952 MT-ND4LP03901 98 aa17.82■□□□□ 0.44
LRFN4-202ENST00000393952 FAM231DQ6ZW35 169 aa17.82■□□□□ 0.44
LRFN4-202ENST00000393952 OR10G8Q8NGN5 311 aa17.82■□□□□ 0.44
LRFN4-202ENST00000393952 DAZAP1Q96EP5 407 aaKnown RBP17.82■□□□□ 0.44
LRFN4-202ENST00000393952 RPS10P5Q9NQ39 176 aa17.82■□□□□ 0.44
LRFN4-202ENST00000393952 OSTCQ9NRP0 149 aa17.82■□□□□ 0.44
LRFN4-202ENST00000393952 DNAH3Q8TD57 4116 aa17.82■□□□□ 0.44
LRFN4-202ENST00000393952 C7orf71A4D174 169 aa17.81■□□□□ 0.44
LRFN4-202ENST00000393952 FABP5P3A8MUU1 101 aa17.81■□□□□ 0.44
LRFN4-202ENST00000393952 PFN1P07737 140 aaKnown RBP17.81■□□□□ 0.44
LRFN4-202ENST00000393952 CRXO43186 299 aaPredicted RBP17.8■□□□□ 0.44
LRFN4-202ENST00000393952 C15orf54Q8N8G6 183 aa17.8■□□□□ 0.44
LRFN4-202ENST00000393952 DNHD1Q96M86 4753 aa17.8■□□□□ 0.44
LRFN4-202ENST00000393952 TRAV12-3A0A0B4J271 114 aa17.79■□□□□ 0.44
LRFN4-202ENST00000393952 P01737 135 aa17.79■□□□□ 0.44
LRFN4-202ENST00000393952 Q6AWC8 147 aa17.79■□□□□ 0.44
LRFN4-202ENST00000393952 XCL2Q9UBD3 114 aa17.79■□□□□ 0.44
LRFN4-202ENST00000393952 NBEAL1Q6ZS30 2694 aa17.79■□□□□ 0.44
LRFN4-202ENST00000393952 TRAV21A0A0B4J279 112 aa17.79■□□□□ 0.44
LRFN4-202ENST00000393952 GATCO43716 136 aaKnown RBP17.79■□□□□ 0.44
LRFN4-202ENST00000393952 NUTF2P61970 127 aaKnown RBP17.79■□□□□ 0.44
LRFN4-202ENST00000393952 C11orf21Q9P2W6 132 aa17.79■□□□□ 0.44
LRFN4-202ENST00000393952 TUBA4BQ9H853 241 aa17.78■□□□□ 0.44
LRFN4-202ENST00000393952 V9GYV3 84 aa17.78■□□□□ 0.44
LRFN4-202ENST00000393952 ZNF705GA8MUZ8 300 aaPredicted RBP17.77■□□□□ 0.44
LRFN4-202ENST00000393952 H7BYZ3 331 aa17.77■□□□□ 0.44
LRFN4-202ENST00000393952 ZNF324O75467 553 aaPredicted RBP17.77■□□□□ 0.44
LRFN4-202ENST00000393952 GIG44P09565 113 aaPredicted RBP17.77■□□□□ 0.44
LRFN4-202ENST00000393952 IGHV4-30-4P0DP06 118 aa17.77■□□□□ 0.44
LRFN4-202ENST00000393952 RPL19P84098 196 aaKnown RBP17.77■□□□□ 0.44
LRFN4-202ENST00000393952 ANAPC16Q96DE5 110 aa17.77■□□□□ 0.44
LRFN4-202ENST00000393952 RPP21Q9H633 154 aaKnown RBP17.77■□□□□ 0.44
LRFN4-202ENST00000393952 A0A087WWC5 75 aa17.76■□□□□ 0.43
LRFN4-202ENST00000393952 PPP1R2P9O14990 202 aa17.76■□□□□ 0.43
LRFN4-202ENST00000393952 AMBPP02760 352 aa17.76■□□□□ 0.43
LRFN4-202ENST00000393952 RBMY1A1P0DJD3 496 aaKnown RBP17.76■□□□□ 0.43
LRFN4-202ENST00000393952 RBMY1CP0DJD4 496 aa17.76■□□□□ 0.43
LRFN4-202ENST00000393952 RBMY1FQ15415 496 aaKnown RBP17.76■□□□□ 0.43
LRFN4-202ENST00000393952 MORN3Q6PF18 240 aaPredicted RBP17.76■□□□□ 0.43
LRFN4-202ENST00000393952 OR2D3Q8NGH3 330 aa17.76■□□□□ 0.43
LRFN4-202ENST00000393952 SCO1O75880 301 aa17.75■□□□□ 0.43
LRFN4-202ENST00000393952 CA1P00915 261 aaPredicted RBP17.75■□□□□ 0.43
LRFN4-202ENST00000393952 ORM1P02763 201 aa17.75■□□□□ 0.43
LRFN4-202ENST00000393952 KPRPQ5T749 579 aaPredicted RBP17.75■□□□□ 0.43
LRFN4-202ENST00000393952 CTDSP1Q9GZU7 261 aa17.75■□□□□ 0.43
LRFN4-202ENST00000393952 NAGKQ9UJ70 344 aa17.75■□□□□ 0.43
LRFN4-202ENST00000393952 LOC102724200A0A096LPH7 203 aaPredicted RBP17.74■□□□□ 0.43
LRFN4-202ENST00000393952 INSP01308 110 aa17.74■□□□□ 0.43
LRFN4-202ENST00000393952 MUC21Q5SSG8 566 aa17.74■□□□□ 0.43
LRFN4-202ENST00000393952 TMSB15BA0A087X1C1 80 aa17.74■□□□□ 0.43
LRFN4-202ENST00000393952 LINC01559Q495D7 138 aa17.74■□□□□ 0.43
LRFN4-202ENST00000393952 CSTL1Q9H114 145 aa17.74■□□□□ 0.43
LRFN4-202ENST00000393952 IGKV3D-20A0A0C4DH25 116 aa17.73■□□□□ 0.43
LRFN4-202ENST00000393952 TMEM189A5PLL7 270 aa17.73■□□□□ 0.43
LRFN4-202ENST00000393952 PRB2P02812 416 aaPredicted RBP17.73■□□□□ 0.43
LRFN4-202ENST00000393952 ANXA2RQ3ZCQ2 193 aa17.72■□□□□ 0.43
LRFN4-202ENST00000393952 GZMBP10144 247 aa17.71■□□□□ 0.43
LRFN4-202ENST00000393952 TMEM242Q9NWH2 141 aa17.71■□□□□ 0.43
LRFN4-202ENST00000393952 CT83Q5H943 113 aa17.7■□□□□ 0.42
LRFN4-202ENST00000393952 ZNF575Q86XF7 245 aa17.7■□□□□ 0.42
LRFN4-202ENST00000393952 C1QTNF4Q9BXJ3 329 aa17.7■□□□□ 0.42
LRFN4-202ENST00000393952 TMEM88Q6PEY1 159 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms