RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SNURFLB1AK76 121 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 KRTAP10-3P60369 221 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 ACTL10Q5JWF8 245 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 TMEM61Q8N0U2 210 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 GFRA4Q9GZZ7 299 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 PPP1R14DQ9NXH3 145 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 A0A1B0GUS0 222 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 HIST1H2BKO60814 126 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 HIST1H2BJP06899 126 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 HIST1H2BOP23527 126 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 HIST1H2BBP33778 126 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 CAMPP49913 170 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 NDUFA6P56556 154 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 HIST1H2BDP58876 126 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 HIST1H2BCP62807 126 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 HIST2H2BEQ16778 126 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 DEFB114Q30KQ6 69 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 CD300EQ496F6 205 aaPredicted RBP6.48□□□□□ -1.37
TDP1-203ENST00000393454 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.48□□□□□ -1.37
TDP1-203ENST00000393454 EBLN2Q6P2I7 272 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 WDR73Q6P4I2 378 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 HIST1H2BHQ93079 126 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 HIST1H2BNQ99877 126 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 HIST1H2BMQ99879 126 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 MRPL18Q9H0U6 180 aaKnown RBP6.48□□□□□ -1.37
TDP1-203ENST00000393454 SAV1Q9H4B6 383 aaPredicted RBP6.48□□□□□ -1.37
TDP1-203ENST00000393454 LENEPQ9Y5L5 61 aa6.48□□□□□ -1.37
TDP1-203ENST00000393454 FAM231BA6NCW3 169 aa6.47□□□□□ -1.37
TDP1-203ENST00000393454 ADARB2-AS1A8MUL3 147 aa6.47□□□□□ -1.37
TDP1-203ENST00000393454 IGKV3-20P01619 116 aa6.47□□□□□ -1.37
TDP1-203ENST00000393454 GPX1P07203 203 aa6.47□□□□□ -1.37
TDP1-203ENST00000393454 RPS20P60866 119 aaKnown RBP6.47□□□□□ -1.37
TDP1-203ENST00000393454 SNRPEP62304 92 aaKnown RBP6.47□□□□□ -1.37
TDP1-203ENST00000393454 COX19Q49B96 90 aa6.47□□□□□ -1.37
TDP1-203ENST00000393454 GDF5OSQ5U4N7 250 aa6.47□□□□□ -1.37
TDP1-203ENST00000393454 NDUFA11Q86Y39 141 aa6.47□□□□□ -1.37
TDP1-203ENST00000393454 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.47□□□□□ -1.37
TDP1-203ENST00000393454 GNB1LQ9BYB4 327 aa6.47□□□□□ -1.37
TDP1-203ENST00000393454 SORL1Q92673 2214 aa6.47□□□□□ -1.37
TDP1-203ENST00000393454 GRIFINA4D1Z8 144 aa6.46□□□□□ -1.37
TDP1-203ENST00000393454 SAP30O75446 220 aa6.46□□□□□ -1.37
TDP1-203ENST00000393454 RNASE4P34096 147 aaKnown RBP6.46□□□□□ -1.37
TDP1-203ENST00000393454 SSTP61278 116 aa6.46□□□□□ -1.37
TDP1-203ENST00000393454 BORCS7Q96B45 105 aa6.46□□□□□ -1.37
TDP1-203ENST00000393454 NIPBLQ6KC79 2804 aaeCLIP6.46□□□□□ -1.38
TDP1-203ENST00000393454 JMJD1CQ15652 2540 aa6.46□□□□□ -1.38
TDP1-203ENST00000393454 A0A0J9YX75 114 aa6.46□□□□□ -1.38
TDP1-203ENST00000393454 PHOX2AO14813 284 aa6.46□□□□□ -1.38
TDP1-203ENST00000393454 PF4P02776 101 aa6.46□□□□□ -1.38
TDP1-203ENST00000393454 DEFB131AP59861 70 aa6.46□□□□□ -1.38
TDP1-203ENST00000393454 PRR9Q5T870 116 aa6.46□□□□□ -1.38
TDP1-203ENST00000393454 TMEM136Q6ZRR5 245 aa6.46□□□□□ -1.38
TDP1-203ENST00000393454 ATP5L2Q7Z4Y8 100 aa6.46□□□□□ -1.38
TDP1-203ENST00000393454 ZFAND2AQ8N6M9 145 aa6.46□□□□□ -1.38
TDP1-203ENST00000393454 NAGKQ9UJ70 344 aa6.46□□□□□ -1.38
TDP1-203ENST00000393454 TRAV2A0A0B4J234 112 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 A0A1B0GUT8 65 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 OR4C46A6NHA9 309 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 DUSP14O95147 198 aaKnown RBP6.45□□□□□ -1.38
TDP1-203ENST00000393454 HLA-DQA1P01909 254 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 MT-ND6P03923 174 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 FOXA3P55318 350 aaPredicted RBP6.45□□□□□ -1.38
TDP1-203ENST00000393454 HBBP68871 147 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 RASL11AQ6T310 242 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 LYZL1Q6UWQ5 148 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 Q6ZQT7 251 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 TRAV25A0A0B4J276 109 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 MUC21A0A0G2JKD1 596 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 MUC21A0A140T8X8 626 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 KNCNA6PVL3 124 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 APCSP02743 223 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 ARMS2P0C7Q2 107 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 RIGQ13278 110 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 KIR3DS1Q14943 382 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 KIAA1644Q3SXP7 199 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 LINC01559Q495D7 138 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 PRR31Q5SQ13 230 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 MUC21Q5SSG8 566 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 Q6AWC8 147 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 FOXI2Q6ZQN5 318 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 FER1L6-AS1Q8NA97 138 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 FAM19A4Q96LR4 140 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 SSBP4Q9BWG4 385 aaPredicted RBP6.45□□□□□ -1.38
TDP1-203ENST00000393454 C11orf21Q9P2W6 132 aa6.45□□□□□ -1.38
TDP1-203ENST00000393454 AGRNO00468 2067 aa6.44□□□□□ -1.38
TDP1-203ENST00000393454 TRAV21A0A0B4J279 112 aa6.44□□□□□ -1.38
TDP1-203ENST00000393454 C5orf52A6NGY3 159 aa6.44□□□□□ -1.38
TDP1-203ENST00000393454 CRISP2P16562 243 aa6.44□□□□□ -1.38
TDP1-203ENST00000393454 LEPP41159 167 aa6.44□□□□□ -1.38
TDP1-203ENST00000393454 SPAG8Q99932 426 aaPredicted RBP6.44□□□□□ -1.38
TDP1-203ENST00000393454 SIGLEC8Q9NYZ4 499 aa6.44□□□□□ -1.38
TDP1-203ENST00000393454 IGKV3D-20A0A0C4DH25 116 aa6.43□□□□□ -1.38
TDP1-203ENST00000393454 TRBV7-9A0A0J9YWB2 115 aa6.43□□□□□ -1.38
TDP1-203ENST00000393454 A0A1B0GXF2 115 aa6.43□□□□□ -1.38
TDP1-203ENST00000393454 MAP6D1Q9H9H5 199 aa6.43□□□□□ -1.38
TDP1-203ENST00000393454 TEP1Q99973 2627 aaKnown RBP6.43□□□□□ -1.38
TDP1-203ENST00000393454 TRAV12-3A0A0B4J271 114 aa6.43□□□□□ -1.38
TDP1-203ENST00000393454 M0R2Z0 102 aa6.43□□□□□ -1.38
TDP1-203ENST00000393454 S100A8P05109 93 aa6.43□□□□□ -1.38
TDP1-203ENST00000393454 TSPOP30536 169 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms