RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 OCC1Q8TAD7 63 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 CCDC88CQ9P219 2028 aa6.44□□□□□ -1.38
LIMS1-203ENST00000393310 LOC107986453A0A1B0GWG9 222 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 SYNGR2O43760 224 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 KIAA1644Q3SXP7 199 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 HDHD3Q9BSH5 251 aaPredicted RBP6.43□□□□□ -1.38
LIMS1-203ENST00000393310 MRPL32Q9BYC8 188 aaKnown RBP6.43□□□□□ -1.38
LIMS1-203ENST00000393310 DYNLT3P51808 116 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 FXYD3Q14802 87 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 ZNF146Q15072 292 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 TEN1Q86WV5 123 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.43□□□□□ -1.38
LIMS1-203ENST00000393310 RBMY1BA6NDE4 496 aaKnown RBP6.43□□□□□ -1.38
LIMS1-203ENST00000393310 RBMY1EA6NEQ0 496 aaKnown RBP6.43□□□□□ -1.38
LIMS1-203ENST00000393310 RBMY1DP0C7P1 496 aaKnown RBP6.43□□□□□ -1.38
LIMS1-203ENST00000393310 XGP55808 180 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 SLC38A11Q08AI6 406 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 TMEM179BQ7Z7N9 219 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 C18orf32Q8TCD1 76 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 LINC01587Q99440 93 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 VSIRQ9H7M9 311 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 DUSP14O95147 198 aaKnown RBP6.43□□□□□ -1.38
LIMS1-203ENST00000393310 HOXD3P31249 432 aaPredicted RBP6.43□□□□□ -1.38
LIMS1-203ENST00000393310 FXYD4P59646 89 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 ORMDL2Q53FV1 153 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 FAM3DQ96BQ1 224 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 C16orf92Q96LL3 132 aa6.43□□□□□ -1.38
LIMS1-203ENST00000393310 YLPM1P49750 1951 aaKnown RBP6.42□□□□□ -1.38
LIMS1-203ENST00000393310 FSHBP01225 129 aa6.42□□□□□ -1.38
LIMS1-203ENST00000393310 LGALS1P09382 135 aaKnown RBP6.42□□□□□ -1.38
LIMS1-203ENST00000393310 RPL27AP46776 148 aaKnown RBP6.42□□□□□ -1.38
LIMS1-203ENST00000393310 TCF23Q7RTU1 214 aa6.42□□□□□ -1.38
LIMS1-203ENST00000393310 ZNRF1Q8ND25 227 aa6.42□□□□□ -1.38
LIMS1-203ENST00000393310 OR5C1Q8NGR4 320 aa6.42□□□□□ -1.38
LIMS1-203ENST00000393310 C12orf77C9JDV5 145 aa6.42□□□□□ -1.38
LIMS1-203ENST00000393310 F5H697 171 aa6.42□□□□□ -1.38
LIMS1-203ENST00000393310 GYPBP06028 91 aa6.42□□□□□ -1.38
LIMS1-203ENST00000393310 ZNF329Q86UD4 541 aa6.42□□□□□ -1.38
LIMS1-203ENST00000393310 UBE2E2Q96LR5 201 aa6.42□□□□□ -1.38
LIMS1-203ENST00000393310 PRR25Q96S07 402 aa6.42□□□□□ -1.38
LIMS1-203ENST00000393310 CD28P10747 220 aa6.42□□□□□ -1.38
LIMS1-203ENST00000393310 Q6Q795 121 aa6.42□□□□□ -1.38
LIMS1-203ENST00000393310 TXNDC17Q9BRA2 123 aa6.42□□□□□ -1.38
LIMS1-203ENST00000393310 A0A087WX48 190 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 TMEM187Q14656 261 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 PLEKHB2Q96CS7 222 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 C21orf62Q9NYP8 219 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 TRAV14DV4A0A0A6YYC5 116 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 FAM90A7PA6NKC0 464 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 FAM90A22PA8MWA6 464 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 FAM90A12PA8MX19 464 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 FAM90A23PA8MXZ1 464 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 PROK1P58294 105 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 HIST2H2BDQ6DRA6 164 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 IKZF5Q9H5V7 419 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 KALRNO60229 2985 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 hDV102S1A0JD36 115 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 H7C2G1 150 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 RBMY1A1P0DJD3 496 aaKnown RBP6.41□□□□□ -1.38
LIMS1-203ENST00000393310 MFAP2P55001 183 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 RPL30P62888 115 aaKnown RBP6.41□□□□□ -1.38
LIMS1-203ENST00000393310 RBMY1FQ15415 496 aaKnown RBP6.41□□□□□ -1.38
LIMS1-203ENST00000393310 TRPT1Q86TN4 253 aaKnown RBP6.41□□□□□ -1.38
LIMS1-203ENST00000393310 C4orf3Q8WVX3 66 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 NABP2Q9BQ15 211 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 ATMQ13315 3056 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 A0A1W2PPR1 153 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 FAM223BA6NKX1 122 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 H3BMM0 161 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 GASTP01350 101 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 PFN1P07737 140 aaKnown RBP6.41□□□□□ -1.38
LIMS1-203ENST00000393310 Q0VG73 95 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 LYPD2Q6UXB3 125 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 FOXI2Q6ZQN5 318 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 FAM223AQ8IWN6 122 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 CEND1Q8N111 149 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 UBE2WQ96B02 151 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 ZNF414Q96IQ9 312 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 SLC25A2Q9BXI2 301 aa6.41□□□□□ -1.38
LIMS1-203ENST00000393310 IGKCP01834 107 aa6.4□□□□□ -1.38
LIMS1-203ENST00000393310 SETD2Q9BYW2 2564 aaPredicted RBP6.4□□□□□ -1.38
LIMS1-203ENST00000393310 ATRQ13535 2644 aa6.4□□□□□ -1.38
LIMS1-203ENST00000393310 PSCAO43653 123 aa6.4□□□□□ -1.38
LIMS1-203ENST00000393310 HTN3P15516 51 aa6.4□□□□□ -1.38
LIMS1-203ENST00000393310 LOXP28300 417 aaPredicted RBP6.4□□□□□ -1.38
LIMS1-203ENST00000393310 TP53TG1Q9Y2A0 90 aa6.4□□□□□ -1.38
LIMS1-203ENST00000393310 FAM90A10PA6NDY2 464 aa6.4□□□□□ -1.39
LIMS1-203ENST00000393310 FAM90A20PA6NIJ5 464 aa6.4□□□□□ -1.39
LIMS1-203ENST00000393310 FAM90A8PA6NJQ4 464 aa6.4□□□□□ -1.39
LIMS1-203ENST00000393310 SSSCA1O60232 199 aa6.4□□□□□ -1.39
LIMS1-203ENST00000393310 FAM90A13PP0C7W8 464 aa6.4□□□□□ -1.39
LIMS1-203ENST00000393310 FAM90A24PP0C7X0 464 aa6.4□□□□□ -1.39
LIMS1-203ENST00000393310 CCL3L1P16619 93 aa6.4□□□□□ -1.39
LIMS1-203ENST00000393310 PDPNQ86YL7 162 aa6.4□□□□□ -1.39
LIMS1-203ENST00000393310 DPH3Q96FX2 82 aa6.4□□□□□ -1.39
LIMS1-203ENST00000393310 M0R2P5 195 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 CCL18P55774 89 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 KLF5Q13887 457 aaPredicted RBP6.39□□□□□ -1.39
LIMS1-203ENST00000393310 LINC01545Q5VT33 79 aa6.39□□□□□ -1.39
LIMS1-203ENST00000393310 TMEM200BQ69YZ2 307 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms