RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 SYNMO15061 1565 aa0.21□□□□□ -2.38
SNORA40.2-201ENST00000390847 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.21□□□□□ -2.38
SNORA40.2-201ENST00000390847 TRBV27A0A0K0K1C4 114 aa0.21□□□□□ -2.38
SNORA40.2-201ENST00000390847 FXYD3Q14802 87 aa0.21□□□□□ -2.38
SNORA40.2-201ENST00000390847 TMEM78Q5T7P6 136 aa0.21□□□□□ -2.38
SNORA40.2-201ENST00000390847 PCBD2Q9H0N5 130 aa0.21□□□□□ -2.38
SNORA40.2-201ENST00000390847 MPC1Q9Y5U8 109 aa0.21□□□□□ -2.38
SNORA40.2-201ENST00000390847 DLC1Q96QB1 1528 aa0.21□□□□□ -2.38
SNORA40.2-201ENST00000390847 LOC101927531A0A1B0GV80 90 aa0.2□□□□□ -2.38
SNORA40.2-201ENST00000390847 H3BMG7 143 aa0.2□□□□□ -2.38
SNORA40.2-201ENST00000390847 CD3DP04234 171 aa0.2□□□□□ -2.38
SNORA40.2-201ENST00000390847 GTF2A1P52655 376 aaPredicted RBP0.2□□□□□ -2.38
SNORA40.2-201ENST00000390847 CCSMST1Q4G0I0 132 aa0.2□□□□□ -2.38
SNORA40.2-201ENST00000390847 OR8J3Q8NGG0 315 aa0.2□□□□□ -2.38
SNORA40.2-201ENST00000390847 MRPL35Q9NZE8 188 aaKnown RBP0.2□□□□□ -2.38
SNORA40.2-201ENST00000390847 E7EQ34 232 aa0.19□□□□□ -2.38
SNORA40.2-201ENST00000390847 FXYD1O00168 92 aa0.19□□□□□ -2.38
SNORA40.2-201ENST00000390847 EDF1O60869 148 aaKnown RBP0.19□□□□□ -2.38
SNORA40.2-201ENST00000390847 SRP9P49458 86 aaKnown RBP0.19□□□□□ -2.38
SNORA40.2-201ENST00000390847 RPL37P61927 97 aaKnown RBP0.19□□□□□ -2.38
SNORA40.2-201ENST00000390847 HRCT1Q6UXD1 115 aa0.19□□□□□ -2.38
SNORA40.2-201ENST00000390847 MORN4Q8NDC4 146 aa0.19□□□□□ -2.38
SNORA40.2-201ENST00000390847 COMMD3Q9UBI1 195 aa0.19□□□□□ -2.38
SNORA40.2-201ENST00000390847 ATPIF1Q9UII2 106 aa0.19□□□□□ -2.38
SNORA40.2-201ENST00000390847 A0A1W2PRE2 83 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 TMEM30CPA0ZSE6 113 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 TMEM189A5PLL7 270 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 IFITM5A6NNB3 132 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 HIGD1CA8MV81 97 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 FAM107AO95990 144 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 IGF2P01344 180 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 SLC25A4P12235 298 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 BLCAPP62952 87 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 C5orf56Q8N8D9 126 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 SMIM7Q9BQ49 75 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 C19orf12Q9NSK7 152 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 TRAPPC2LQ9UL33 140 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 MED31Q9Y3C7 131 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 BCORL1Q5H9F3 1711 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 CTTNBP2Q8WZ74 1663 aa0.18□□□□□ -2.38
SNORA40.2-201ENST00000390847 TCOF1Q13428 1488 aaKnown RBP0.17□□□□□ -2.38
SNORA40.2-201ENST00000390847 SYNE1Q8NF91 8797 aaKnown RBP0.17□□□□□ -2.38
SNORA40.2-201ENST00000390847 NBDYA0A0U1RRE5 68 aa0.17□□□□□ -2.38
SNORA40.2-201ENST00000390847 CDC42EP2O14613 210 aa0.17□□□□□ -2.38
SNORA40.2-201ENST00000390847 TPST1O60507 370 aa0.17□□□□□ -2.38
SNORA40.2-201ENST00000390847 CRYGSP22914 178 aa0.17□□□□□ -2.38
SNORA40.2-201ENST00000390847 ETV6P41212 452 aa0.17□□□□□ -2.38
SNORA40.2-201ENST00000390847 LSM3P62310 102 aaKnown RBP0.17□□□□□ -2.38
SNORA40.2-201ENST00000390847 OR51A4Q8NGJ6 313 aa0.17□□□□□ -2.38
SNORA40.2-201ENST00000390847 IGKCP01834 107 aa0.16□□□□□ -2.38
SNORA40.2-201ENST00000390847 IL7P13232 177 aa0.16□□□□□ -2.38
SNORA40.2-201ENST00000390847 IQCJQ1A5X6 159 aa0.16□□□□□ -2.38
SNORA40.2-201ENST00000390847 LYPD5Q6UWN5 251 aa0.16□□□□□ -2.38
SNORA40.2-201ENST00000390847 THEM6Q8WUY1 208 aa0.16□□□□□ -2.38
SNORA40.2-201ENST00000390847 TRBV7-6A0A0J9YX20 115 aa0.15□□□□□ -2.39
SNORA40.2-201ENST00000390847 M0QZK8 103 aa0.15□□□□□ -2.39
SNORA40.2-201ENST00000390847 ASB16-AS1Q495Z4 193 aa0.15□□□□□ -2.39
SNORA40.2-201ENST00000390847 DEFB132Q7Z7B7 95 aa0.15□□□□□ -2.39
SNORA40.2-201ENST00000390847 MYH3P11055 1940 aa0.15□□□□□ -2.39
SNORA40.2-201ENST00000390847 FAM135BQ49AJ0 1406 aa0.14□□□□□ -2.39
SNORA40.2-201ENST00000390847 A0A0G2JMM0 328 aa0.14□□□□□ -2.39
SNORA40.2-201ENST00000390847 RHOHQ15669 191 aa0.14□□□□□ -2.39
SNORA40.2-201ENST00000390847 IDO2Q6ZQW0 420 aa0.14□□□□□ -2.39
SNORA40.2-201ENST00000390847 BRK1Q8WUW1 75 aa0.14□□□□□ -2.39
SNORA40.2-201ENST00000390847 DMAC1Q96GE9 116 aa0.14□□□□□ -2.39
SNORA40.2-201ENST00000390847 CBLN4Q9NTU7 201 aa0.14□□□□□ -2.39
SNORA40.2-201ENST00000390847 LOC107984640A0A0U1RRK4 108 aa0.13□□□□□ -2.39
SNORA40.2-201ENST00000390847 CKS2P33552 79 aa0.13□□□□□ -2.39
SNORA40.2-201ENST00000390847 POLR2HP52434 150 aaKnown RBP0.13□□□□□ -2.39
SNORA40.2-201ENST00000390847 ATG5Q9H1Y0 275 aa0.13□□□□□ -2.39
SNORA40.2-201ENST00000390847 USP54Q70EL1 1684 aa0.12□□□□□ -2.39
SNORA40.2-201ENST00000390847 HBDP02042 147 aa0.12□□□□□ -2.39
SNORA40.2-201ENST00000390847 RPL7P18124 248 aaKnown RBP0.12□□□□□ -2.39
SNORA40.2-201ENST00000390847 TPRP12270 2363 aaKnown RBP0.12□□□□□ -2.39
SNORA40.2-201ENST00000390847 A2MP01023 1474 aa0.11□□□□□ -2.39
SNORA40.2-201ENST00000390847 KIAA1549LQ6ZVL6 1849 aa0.11□□□□□ -2.39
SNORA40.2-201ENST00000390847 IGHV1-24A0A0C4DH33 117 aa0.11□□□□□ -2.39
SNORA40.2-201ENST00000390847 A0A1B0GV72 72 aa0.11□□□□□ -2.39
SNORA40.2-201ENST00000390847 UNQ5815/PRO19632Q6UWF5 114 aa0.11□□□□□ -2.39
SNORA40.2-201ENST00000390847 TMEM14BQ9NUH8 114 aa0.11□□□□□ -2.39
SNORA40.2-201ENST00000390847 V9GYQ6 96 aa0.11□□□□□ -2.39
SNORA40.2-201ENST00000390847 ANKRD31Q8N7Z5 1873 aa0.11□□□□□ -2.39
SNORA40.2-201ENST00000390847 NUP210Q8TEM1 1887 aaPredicted RBP0.11□□□□□ -2.39
SNORA40.2-201ENST00000390847 GPR98Q8WXG9 6306 aa0.1□□□□□ -2.39
SNORA40.2-201ENST00000390847 ZFYVE26Q68DK2 2539 aa0.1□□□□□ -2.39
SNORA40.2-201ENST00000390847 RPL22P35268 128 aaKnown RBP0.1□□□□□ -2.39
SNORA40.2-201ENST00000390847 OR5A2Q8NGI9 324 aa0.1□□□□□ -2.39
SNORA40.2-201ENST00000390847 OR9Q1Q8NGQ5 310 aa0.1□□□□□ -2.39
SNORA40.2-201ENST00000390847 OTOSQ8NHW6 89 aa0.1□□□□□ -2.39
SNORA40.2-201ENST00000390847 ANK1P16157 1881 aa0.1□□□□□ -2.39
SNORA40.2-201ENST00000390847 PIEZO1Q92508 2521 aa0.09□□□□□ -2.39
SNORA40.2-201ENST00000390847 CCKP06307 115 aa0.09□□□□□ -2.4
SNORA40.2-201ENST00000390847 FABP1P07148 127 aa0.09□□□□□ -2.4
SNORA40.2-201ENST00000390847 KLKP1Q107X0 134 aa0.09□□□□□ -2.4
SNORA40.2-201ENST00000390847 NAT14Q8WUY8 206 aa0.09□□□□□ -2.4
SNORA40.2-201ENST00000390847 TANC2Q9HCD6 1990 aa0.08□□□□□ -2.4
SNORA40.2-201ENST00000390847 UQCRQO14949 82 aa0.08□□□□□ -2.4
SNORA40.2-201ENST00000390847 IFNA21P01568 189 aa0.08□□□□□ -2.4
SNORA40.2-201ENST00000390847 PCBD1P61457 104 aa0.08□□□□□ -2.4
SNORA40.2-201ENST00000390847 SAMD13Q5VXD3 122 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms