RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 FMC1Q96HJ9 113 aa9.18□□□□□ -0.94
RAPGEF3-201ENST00000389212 URB1-AS1Q96HZ7 61 aa9.18□□□□□ -0.94
RAPGEF3-201ENST00000389212 MAP1AP78559 2803 aaPredicted RBP9.18□□□□□ -0.94
RAPGEF3-201ENST00000389212 A0A1B0GXF2 115 aa9.18□□□□□ -0.94
RAPGEF3-201ENST00000389212 IGLV2-11P01706 119 aa9.18□□□□□ -0.94
RAPGEF3-201ENST00000389212 MEIG1Q5JSS6 88 aa9.18□□□□□ -0.94
RAPGEF3-201ENST00000389212 C19orf71A6NCJ1 209 aa9.18□□□□□ -0.94
RAPGEF3-201ENST00000389212 TMUB1Q9BVT8 246 aa9.18□□□□□ -0.94
RAPGEF3-201ENST00000389212 ZNF785A8K8V0 405 aa9.17□□□□□ -0.94
RAPGEF3-201ENST00000389212 IGFL4Q6B9Z1 124 aa9.17□□□□□ -0.94
RAPGEF3-201ENST00000389212 CFHR4Q92496 578 aa9.17□□□□□ -0.94
RAPGEF3-201ENST00000389212 PRSS22Q9GZN4 317 aa9.17□□□□□ -0.94
RAPGEF3-201ENST00000389212 OTORQ9NRC9 128 aa9.17□□□□□ -0.94
RAPGEF3-201ENST00000389212 FAM162BQ5T6X4 162 aa9.17□□□□□ -0.94
RAPGEF3-201ENST00000389212 ZNF491Q8N8L2 437 aa9.17□□□□□ -0.94
RAPGEF3-201ENST00000389212 RNF125Q96EQ8 232 aa9.17□□□□□ -0.94
RAPGEF3-201ENST00000389212 CELSR1Q9NYQ6 3014 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 CACNG7P62955 275 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 A0A1W2PPR1 153 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 SNCGO76070 127 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 SRSF9Q13242 221 aaKnown RBP eCLIP9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 LY6G5BQ8NDX9 201 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 SHANK2-AS3Q9BTD1 123 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 TRBV19A0A075B6N1 114 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 FABP5P3A8MUU1 101 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 SMAD7O15105 426 aaKnown RBP9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 NCR2O95944 276 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 EVI2AP22794 236 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 TTC9CQ8N5M4 171 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 TIMD4Q96H15 378 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 C8orf49Q96NF6 230 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 VPREB3Q9UKI3 123 aa9.16□□□□□ -0.94
RAPGEF3-201ENST00000389212 OR2J3O76001 311 aa9.15□□□□□ -0.94
RAPGEF3-201ENST00000389212 ZFP36P26651 326 aaKnown RBP9.15□□□□□ -0.94
RAPGEF3-201ENST00000389212 FAM159AQ6UWV7 190 aa9.15□□□□□ -0.94
RAPGEF3-201ENST00000389212 H3BRN7 92 aa9.15□□□□□ -0.94
RAPGEF3-201ENST00000389212 ARMS2P0C7Q2 107 aa9.15□□□□□ -0.94
RAPGEF3-201ENST00000389212 RASL11AQ6T310 242 aa9.15□□□□□ -0.94
RAPGEF3-201ENST00000389212 SIGLEC15Q6ZMC9 328 aa9.15□□□□□ -0.94
RAPGEF3-201ENST00000389212 RBPMS2Q6ZRY4 209 aaKnown RBP9.15□□□□□ -0.94
RAPGEF3-201ENST00000389212 VMO1Q7Z5L0 202 aa9.15□□□□□ -0.94
RAPGEF3-201ENST00000389212 FANCD2OSQ96PS1 177 aa9.15□□□□□ -0.94
RAPGEF3-201ENST00000389212 APOHP02749 345 aaPredicted RBP9.14□□□□□ -0.95
RAPGEF3-201ENST00000389212 PSMB2P49721 201 aa9.14□□□□□ -0.95
RAPGEF3-201ENST00000389212 FOXI1Q12951 378 aa9.14□□□□□ -0.95
RAPGEF3-201ENST00000389212 OR4X2Q8NGF9 303 aa9.14□□□□□ -0.95
RAPGEF3-201ENST00000389212 SPG11Q96JI7 2443 aa9.14□□□□□ -0.95
RAPGEF3-201ENST00000389212 C18orf15Q96N68 181 aa9.14□□□□□ -0.95
RAPGEF3-201ENST00000389212 AP5S1Q9NUS5 200 aa9.14□□□□□ -0.95
RAPGEF3-201ENST00000389212 CRIP1P50238 77 aa9.14□□□□□ -0.95
RAPGEF3-201ENST00000389212 KLF5Q13887 457 aaPredicted RBP9.14□□□□□ -0.95
RAPGEF3-201ENST00000389212 ATP5L2Q7Z4Y8 100 aa9.14□□□□□ -0.95
RAPGEF3-201ENST00000389212 OR11H6Q8NGC7 330 aa9.14□□□□□ -0.95
RAPGEF3-201ENST00000389212 ZNF492Q9P255 531 aa9.14□□□□□ -0.95
RAPGEF3-201ENST00000389212 IGKV2-40A0A087WW87 121 aaPredicted RBP9.13□□□□□ -0.95
RAPGEF3-201ENST00000389212 IGKV2D-40P01614 121 aaPredicted RBP9.13□□□□□ -0.95
RAPGEF3-201ENST00000389212 HLA-DMBP28068 263 aa9.13□□□□□ -0.95
RAPGEF3-201ENST00000389212 FOXI2Q6ZQN5 318 aa9.13□□□□□ -0.95
RAPGEF3-201ENST00000389212 TMEM14CQ9P0S9 112 aa9.13□□□□□ -0.95
RAPGEF3-201ENST00000389212 ZNF414Q96IQ9 312 aa9.13□□□□□ -0.95
RAPGEF3-201ENST00000389212 TM2D2Q9BX73 214 aa9.13□□□□□ -0.95
RAPGEF3-201ENST00000389212 VPS13CQ709C8 3753 aa9.13□□□□□ -0.95
RAPGEF3-201ENST00000389212 F8W735 103 aaPredicted RBP9.13□□□□□ -0.95
RAPGEF3-201ENST00000389212 LY6DQ14210 128 aa9.13□□□□□ -0.95
RAPGEF3-201ENST00000389212 FBXL19-AS1Q494R0 122 aa9.13□□□□□ -0.95
RAPGEF3-201ENST00000389212 FAM120AOSQ5T036 256 aa9.13□□□□□ -0.95
RAPGEF3-201ENST00000389212 Q8TAT8 98 aa9.13□□□□□ -0.95
RAPGEF3-201ENST00000389212 IGHV3OR16-13A0A075B7E8 117 aa9.12□□□□□ -0.95
RAPGEF3-201ENST00000389212 IGHV3-74A0A0B4J1X5 117 aa9.12□□□□□ -0.95
RAPGEF3-201ENST00000389212 RNF5Q99942 180 aa9.12□□□□□ -0.95
RAPGEF3-201ENST00000389212 PIMREGQ9BSJ6 248 aa9.12□□□□□ -0.95
RAPGEF3-201ENST00000389212 ODF3BA8MYP8 253 aa9.12□□□□□ -0.95
RAPGEF3-201ENST00000389212 NDUFA3O95167 84 aa9.12□□□□□ -0.95
RAPGEF3-201ENST00000389212 C5orf47Q569G3 176 aa9.12□□□□□ -0.95
RAPGEF3-201ENST00000389212 Q6AWC8 147 aa9.12□□□□□ -0.95
RAPGEF3-201ENST00000389212 C11orf71Q6IPW1 123 aa9.12□□□□□ -0.95
RAPGEF3-201ENST00000389212 OR9G4Q8NGQ1 327 aa9.12□□□□□ -0.95
RAPGEF3-201ENST00000389212 HIST1H4GQ99525 98 aa9.12□□□□□ -0.95
RAPGEF3-201ENST00000389212 MSRB2Q9Y3D2 182 aa9.12□□□□□ -0.95
RAPGEF3-201ENST00000389212 IGLV11-55A0A075B6I3 123 aa9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 TRAV8-2A0A0B4J237 113 aa9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 IGHV3-66A0A0C4DH42 116 aa9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 MRPS12O15235 138 aaKnown RBP9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 KLRB1Q12918 225 aa9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 CDIP1Q9H305 208 aa9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 C21orf62Q9NYP8 219 aa9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 NPIPB6E9PJ23 425 aa9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 EMP1P54849 157 aa9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 MFAP4P55083 255 aa9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 ECSCRQ19T08 205 aa9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 CT83Q5H943 113 aa9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 NPBQ8NG41 125 aa9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 OVOL3O00110 214 aa9.11□□□□□ -0.95
RAPGEF3-201ENST00000389212 LOC107984640A0A0U1RRK4 108 aa9.1□□□□□ -0.95
RAPGEF3-201ENST00000389212 IFITM1P13164 125 aa9.1□□□□□ -0.95
RAPGEF3-201ENST00000389212 HOXB4P17483 251 aaPredicted RBP9.1□□□□□ -0.95
RAPGEF3-201ENST00000389212 RAX2Q96IS3 184 aa9.1□□□□□ -0.95
RAPGEF3-201ENST00000389212 MAP1LC3AQ9H492 121 aa9.1□□□□□ -0.95
RAPGEF3-201ENST00000389212 IGHV3-49A0A0A0MS15 119 aa9.1□□□□□ -0.95
RAPGEF3-201ENST00000389212 WI2-2373I1.2A0A1W2PRP0 233 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms