RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 ZNF415Q09FC8 603 aa12.17□□□□□ -0.46
RPUSD3-201ENST00000383820 FAM122CQ6P4D5 195 aa12.17□□□□□ -0.46
RPUSD3-201ENST00000383820 IQCF2Q8IXL9 164 aa12.17□□□□□ -0.46
RPUSD3-201ENST00000383820 FAM167A-AS1Q96KT0 104 aa12.17□□□□□ -0.46
RPUSD3-201ENST00000383820 C8orf49Q96NF6 230 aa12.17□□□□□ -0.46
RPUSD3-201ENST00000383820 MRPL32Q9BYC8 188 aaKnown RBP12.17□□□□□ -0.46
RPUSD3-201ENST00000383820 LY96Q9Y6Y9 160 aa12.17□□□□□ -0.46
RPUSD3-201ENST00000383820 PRAF2O60831 178 aa12.16□□□□□ -0.46
RPUSD3-201ENST00000383820 ZNF138P52744 262 aa12.16□□□□□ -0.46
RPUSD3-201ENST00000383820 DEFA1P59665 94 aa12.16□□□□□ -0.46
RPUSD3-201ENST00000383820 DEFA3P59666 94 aa12.16□□□□□ -0.46
RPUSD3-201ENST00000383820 GCSAMLQ5JQS6 135 aa12.16□□□□□ -0.46
RPUSD3-201ENST00000383820 OR51M1Q9H341 326 aa12.16□□□□□ -0.46
RPUSD3-201ENST00000383820 TNFRSF18Q9Y5U5 241 aa12.16□□□□□ -0.46
RPUSD3-201ENST00000383820 A0A087WTM6 91 aa12.15□□□□□ -0.46
RPUSD3-201ENST00000383820 IFNA5P01569 189 aa12.15□□□□□ -0.46
RPUSD3-201ENST00000383820 INAFM2P0DMQ5 153 aa12.15□□□□□ -0.46
RPUSD3-201ENST00000383820 IFITM3Q01628 133 aa12.15□□□□□ -0.46
RPUSD3-201ENST00000383820 TRGV4A0A0C4DH28 118 aa12.14□□□□□ -0.47
RPUSD3-201ENST00000383820 RBAKDNA6NC62 111 aa12.14□□□□□ -0.47
RPUSD3-201ENST00000383820 ZNF266Q14584 549 aa12.14□□□□□ -0.47
RPUSD3-201ENST00000383820 Q6ZQT7 251 aa12.14□□□□□ -0.47
RPUSD3-201ENST00000383820 MIR17HGQ75NE6 70 aa12.14□□□□□ -0.47
RPUSD3-201ENST00000383820 OR10G4Q8NGN3 311 aa12.14□□□□□ -0.47
RPUSD3-201ENST00000383820 FRZBQ92765 325 aa12.14□□□□□ -0.47
RPUSD3-201ENST00000383820 KCNIP2Q9NS61 270 aa12.14□□□□□ -0.47
RPUSD3-201ENST00000383820 MSRB1Q9NZV6 116 aa12.14□□□□□ -0.47
RPUSD3-201ENST00000383820 HERC1Q15751 4861 aa12.13□□□□□ -0.47
RPUSD3-201ENST00000383820 K7EQD1 137 aa12.13□□□□□ -0.47
RPUSD3-201ENST00000383820 ORM1P02763 201 aa12.13□□□□□ -0.47
RPUSD3-201ENST00000383820 EVI2AP22794 236 aa12.13□□□□□ -0.47
RPUSD3-201ENST00000383820 SRIP30626 198 aa12.13□□□□□ -0.47
RPUSD3-201ENST00000383820 FUSP35637 526 aaKnown RBP eCLIP12.13□□□□□ -0.47
RPUSD3-201ENST00000383820 RASL10AQ92737 203 aa12.13□□□□□ -0.47
RPUSD3-201ENST00000383820 FXYD5Q96DB9 178 aa12.13□□□□□ -0.47
RPUSD3-201ENST00000383820 SPXQ9BT56 116 aa12.13□□□□□ -0.47
RPUSD3-201ENST00000383820 PAXXQ9BUH6 204 aa12.13□□□□□ -0.47
RPUSD3-201ENST00000383820 LENEPQ9Y5L5 61 aa12.13□□□□□ -0.47
RPUSD3-201ENST00000383820 INMT-MINDY4F8WBC2 141 aa12.12□□□□□ -0.47
RPUSD3-201ENST00000383820 DNAH10OSP0CZ25 163 aa12.12□□□□□ -0.47
RPUSD3-201ENST00000383820 CSN1S1P47710 185 aa12.12□□□□□ -0.47
RPUSD3-201ENST00000383820 OR5C1Q8NGR4 320 aa12.12□□□□□ -0.47
RPUSD3-201ENST00000383820 Q8TAT8 98 aa12.12□□□□□ -0.47
RPUSD3-201ENST00000383820 THAP6Q8TBB0 222 aa12.12□□□□□ -0.47
RPUSD3-201ENST00000383820 PCNPQ8WW12 178 aaKnown RBP12.12□□□□□ -0.47
RPUSD3-201ENST00000383820 SLC25A31Q9H0C2 315 aa12.12□□□□□ -0.47
RPUSD3-201ENST00000383820 E5RGE8 158 aa12.11□□□□□ -0.47
RPUSD3-201ENST00000383820 SIX6O95475 246 aa12.11□□□□□ -0.47
RPUSD3-201ENST00000383820 KRTAP10-1P60331 282 aa12.11□□□□□ -0.47
RPUSD3-201ENST00000383820 NHLH2Q02577 135 aa12.11□□□□□ -0.47
RPUSD3-201ENST00000383820 LRRC37A5PQ49AS3 106 aa12.11□□□□□ -0.47
RPUSD3-201ENST00000383820 Q5VSD8 79 aa12.11□□□□□ -0.47
RPUSD3-201ENST00000383820 Q6AWC8 147 aa12.11□□□□□ -0.47
RPUSD3-201ENST00000383820 C10orf126Q8N4M7 172 aa12.11□□□□□ -0.47
RPUSD3-201ENST00000383820 PHYHIPLQ96FC7 376 aa12.11□□□□□ -0.47
RPUSD3-201ENST00000383820 ZNF479Q96JC4 524 aa12.11□□□□□ -0.47
RPUSD3-201ENST00000383820 TXNDC17Q9BRA2 123 aa12.11□□□□□ -0.47
RPUSD3-201ENST00000383820 MDFICQ9P1T7 246 aa12.11□□□□□ -0.47
RPUSD3-201ENST00000383820 TRGV11A0A075B6L2 103 aa12.1□□□□□ -0.47
RPUSD3-201ENST00000383820 SSNA1O43805 119 aa12.1□□□□□ -0.47
RPUSD3-201ENST00000383820 OR10J4P0C629 311 aa12.1□□□□□ -0.47
RPUSD3-201ENST00000383820 SFTA3P0C7M3 94 aa12.1□□□□□ -0.47
RPUSD3-201ENST00000383820 GYPEP15421 78 aa12.1□□□□□ -0.47
RPUSD3-201ENST00000383820 MUC21Q5SSG8 566 aa12.1□□□□□ -0.47
RPUSD3-201ENST00000383820 WFDC10BQ8IUB3 73 aa12.1□□□□□ -0.47
RPUSD3-201ENST00000383820 C9JCJ5 164 aa12.09□□□□□ -0.47
RPUSD3-201ENST00000383820 FAM159AQ6UWV7 190 aa12.09□□□□□ -0.47
RPUSD3-201ENST00000383820 WDR61Q9GZS3 305 aaKnown RBP12.09□□□□□ -0.47
RPUSD3-201ENST00000383820 DMBT1Q9UGM3 2413 aaPredicted RBP12.08□□□□□ -0.48
RPUSD3-201ENST00000383820 C17orf112F2Z3M2 114 aa12.08□□□□□ -0.48
RPUSD3-201ENST00000383820 OR7C2O60412 319 aa12.08□□□□□ -0.48
RPUSD3-201ENST00000383820 GCSHP23434 173 aa12.08□□□□□ -0.48
RPUSD3-201ENST00000383820 RANP62826 216 aaKnown RBP12.08□□□□□ -0.48
RPUSD3-201ENST00000383820 TMEM183BQ1AE95 376 aa12.08□□□□□ -0.48
RPUSD3-201ENST00000383820 TDRG1Q3Y452 100 aa12.08□□□□□ -0.48
RPUSD3-201ENST00000383820 SH2D6Q7Z4S9 175 aa12.08□□□□□ -0.48
RPUSD3-201ENST00000383820 TMEM183AQ8IXX5 376 aa12.08□□□□□ -0.48
RPUSD3-201ENST00000383820 TMED6Q8WW62 240 aa12.08□□□□□ -0.48
RPUSD3-201ENST00000383820 TRAV4A0A0B4J268 109 aa12.07□□□□□ -0.48
RPUSD3-201ENST00000383820 TIRAPP58753 221 aa12.07□□□□□ -0.48
RPUSD3-201ENST00000383820 FAT1Q14517 4588 aa12.07□□□□□ -0.48
RPUSD3-201ENST00000383820 DIRC3C9JPN6 131 aa12.06□□□□□ -0.48
RPUSD3-201ENST00000383820 CRYGDP07320 174 aa12.06□□□□□ -0.48
RPUSD3-201ENST00000383820 UBE2L3P68036 154 aaKnown RBP12.06□□□□□ -0.48
RPUSD3-201ENST00000383820 NMES1Q9C002 83 aa12.06□□□□□ -0.48
RPUSD3-201ENST00000383820 BOLA1Q9Y3E2 137 aa12.06□□□□□ -0.48
RPUSD3-201ENST00000383820 OR4C5Q8NGB2 326 aa12.05□□□□□ -0.48
RPUSD3-201ENST00000383820 MARVELD1Q9BSK0 173 aa12.05□□□□□ -0.48
RPUSD3-201ENST00000383820 OR5AC2Q9NZP5 309 aa12.05□□□□□ -0.48
RPUSD3-201ENST00000383820 M0R2P5 195 aa12.04□□□□□ -0.48
RPUSD3-201ENST00000383820 TAS2R45P59539 299 aa12.04□□□□□ -0.48
RPUSD3-201ENST00000383820 CYCSP99999 105 aaKnown RBP12.04□□□□□ -0.48
RPUSD3-201ENST00000383820 KHDC3LQ587J8 217 aa12.04□□□□□ -0.48
RPUSD3-201ENST00000383820 ARL6IP6Q8N6S5 226 aa12.04□□□□□ -0.48
RPUSD3-201ENST00000383820 NTN5Q8WTR8 489 aaPredicted RBP12.04□□□□□ -0.48
RPUSD3-201ENST00000383820 IGHV3-38A0A0C4DH36 116 aa12.03□□□□□ -0.48
RPUSD3-201ENST00000383820 FAM229AH3BQW9 127 aa12.03□□□□□ -0.48
RPUSD3-201ENST00000383820 TMEM70Q9BUB7 260 aa12.03□□□□□ -0.48
RPUSD3-201ENST00000383820 VPS13BQ7Z7G8 4022 aa12.02□□□□□ -0.49
RPUSD3-201ENST00000383820 IGHV3-16A0A0C4DH30 117 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms