RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 C8orf31Q8N9H6 132 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 SPINK8P0C7L1 97 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 DAD1P61803 113 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 C3orf56Q8N813 242 aa12.73□□□□□ -0.37
COL2A1-202ENST00000380518 VOPP1Q96AW1 172 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 F8VRH5 84 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 ZNRF2Q8NHG8 242 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 PYGO2Q9BRQ0 406 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 MRPL35Q9NZE8 188 aaKnown RBP12.72□□□□□ -0.37
COL2A1-202ENST00000380518 TRAV12-2A0A075B6T6 113 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 C9orf118A6NHY6 69 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 F5H768 121 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 INAFM2P0DMQ5 153 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 TMEM243Q9BU79 118 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 CDK2AP2O75956 126 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 HLA-DRB4P13762 266 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 CFHR3Q02985 330 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 HLA-DRB4X5D2U9 266 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 FAM208BQ5VWN6 2430 aa12.72□□□□□ -0.37
COL2A1-202ENST00000380518 IGHV7-4-1A0A0J9YVY3 117 aa12.71□□□□□ -0.37
COL2A1-202ENST00000380518 OR11H6Q8NGC7 330 aa12.71□□□□□ -0.37
COL2A1-202ENST00000380518 ELANEP08246 267 aa12.71□□□□□ -0.37
COL2A1-202ENST00000380518 Q96MF0 132 aa12.71□□□□□ -0.38
COL2A1-202ENST00000380518 NDUFA12Q9UI09 145 aa12.71□□□□□ -0.38
COL2A1-202ENST00000380518 ZNF561-AS1K7EIQ3 104 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 IGHV2-70P01814 119 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 SRSF2Q01130 221 aaKnown RBP12.7□□□□□ -0.38
COL2A1-202ENST00000380518 LURAP1LQ8IV03 231 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 C20orf78Q9BR46 151 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 GAGE7O76087 117 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 GAGE12FP0CL80 117 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 GAGE12GP0CL81 117 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 GAGE12IP0CL82 117 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 BDP1A6H8Y1 2624 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 IGLC7A0M8Q6 106 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 LTAP01374 205 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 PFN2P35080 140 aa12.7□□□□□ -0.38
COL2A1-202ENST00000380518 C22orf46C9J442 243 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 H3BMM0 161 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 H3BUA1 57 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 LYPD6BQ8NI32 183 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 UBE2WQ96B02 151 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 C11orf53Q8IXP5 236 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 TTC28Q96AY4 2481 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 SOCS3O14543 225 aa12.69□□□□□ -0.38
COL2A1-202ENST00000380518 VWC2Q2TAL6 325 aa12.68□□□□□ -0.38
COL2A1-202ENST00000380518 ATP6V0BQ99437 205 aa12.68□□□□□ -0.38
COL2A1-202ENST00000380518 TCF15Q12870 199 aa12.68□□□□□ -0.38
COL2A1-202ENST00000380518 IGHV3-38A0A0C4DH36 116 aa12.68□□□□□ -0.38
COL2A1-202ENST00000380518 PIP4P1Q86T03 277 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 TAL2Q16559 108 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 EDA2RQ9HAV5 297 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 CTSZQ9UBR2 303 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 TICRRQ7Z2Z1 1910 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 PTPRQQ9UMZ3 2332 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 PPDPFLQ8WWR9 84 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 TSC2P49815 1807 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 K7EN84 100 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 ETDBQ3ZM63 59 aa12.67□□□□□ -0.38
COL2A1-202ENST00000380518 PRO1854Q9UHT4 67 aa12.66□□□□□ -0.38
COL2A1-202ENST00000380518 GAGE6Q13070 117 aa12.66□□□□□ -0.38
COL2A1-202ENST00000380518 FAM120AOSQ5T036 256 aa12.66□□□□□ -0.38
COL2A1-202ENST00000380518 FGF6P10767 208 aa12.66□□□□□ -0.38
COL2A1-202ENST00000380518 LENEPQ9Y5L5 61 aa12.66□□□□□ -0.38
COL2A1-202ENST00000380518 BVES-AS1Q5T3Y7 98 aa12.66□□□□□ -0.38
COL2A1-202ENST00000380518 WIPF2Q8TF74 440 aaPredicted RBP12.65□□□□□ -0.38
COL2A1-202ENST00000380518 RNF138Q8WVD3 245 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 F8W1H4 67 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 J3QQQ9 107 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 C17orf77Q96MU5 243 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 HELZP42694 1942 aaKnown RBP12.65□□□□□ -0.38
COL2A1-202ENST00000380518 SHISA9B4DS77 424 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 NDUFS7O75251 213 aa12.65□□□□□ -0.38
COL2A1-202ENST00000380518 MRPL53Q96EL3 112 aaKnown RBP12.65□□□□□ -0.38
COL2A1-202ENST00000380518 MYLKQ15746 1914 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 APOC4P55056 127 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 ZNF493Q6ZR52 646 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 DYNAPQ8N1N2 210 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 K7EP34 96 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 ASPHD1Q5U4P2 390 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 SPANXA1Q9NS26 97 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 ZFHX2Q9C0A1 2572 aaPredicted RBP12.64□□□□□ -0.39
COL2A1-202ENST00000380518 HERVK_113P63121 156 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 MORN5Q5VZ52 161 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 NLRC5Q86WI3 1866 aa12.64□□□□□ -0.39
COL2A1-202ENST00000380518 ZGRF1Q86YA3 2104 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 SIVA1O15304 175 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 FOXI2Q6ZQN5 318 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 SLX1AQ9BQ83 275 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 PLXNA2O75051 1894 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 MED13Q9UHV7 2174 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 ACACBO00763 2458 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 RBAKDNA6NC62 111 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 NXPH4O95158 308 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 HLA-DMBP28068 263 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 PCNX2A6NKB5 2137 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 K7EP13 123 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 EGR2P11161 476 aaPredicted RBP12.63□□□□□ -0.39
COL2A1-202ENST00000380518 CEND1Q8N111 149 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms