RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CREBBPQ92793 2442 aa17.61■□□□□ 0.41
VPS16-201ENST00000380443 FOXE3Q13461 319 aa17.61■□□□□ 0.41
VPS16-201ENST00000380443 FAM104BQ5XKR9 115 aa17.61■□□□□ 0.41
VPS16-201ENST00000380443 UFC1Q9Y3C8 167 aa17.61■□□□□ 0.41
VPS16-201ENST00000380443 U3KQK5 164 aa17.61■□□□□ 0.41
VPS16-201ENST00000380443 C3orf79P0CE67 100 aa17.6■□□□□ 0.41
VPS16-201ENST00000380443 CD33P20138 364 aa17.6■□□□□ 0.41
VPS16-201ENST00000380443 MAPK1IP1LQ8NDC0 245 aa17.6■□□□□ 0.41
VPS16-201ENST00000380443 ZNF738Q8NE65 137 aa17.6■□□□□ 0.41
VPS16-201ENST00000380443 URB1-AS1Q96HZ7 61 aa17.6■□□□□ 0.41
VPS16-201ENST00000380443 C20orf144Q9BQM9 153 aa17.6■□□□□ 0.41
VPS16-201ENST00000380443 SMPXQ9UHP9 88 aa17.6■□□□□ 0.41
VPS16-201ENST00000380443 MYO9AB2RTY4 2548 aa17.6■□□□□ 0.41
VPS16-201ENST00000380443 FAM181BA6NEQ2 426 aa17.59■□□□□ 0.41
VPS16-201ENST00000380443 ELANEP08246 267 aa17.59■□□□□ 0.41
VPS16-201ENST00000380443 NDUFAF3Q9BU61 184 aa17.59■□□□□ 0.41
VPS16-201ENST00000380443 RHPN1-AS1Q9BWJ2 59 aa17.59■□□□□ 0.41
VPS16-201ENST00000380443 TRBV7-9A0A0J9YWB2 115 aa17.58■□□□□ 0.41
VPS16-201ENST00000380443 Q8N976 141 aa17.58■□□□□ 0.41
VPS16-201ENST00000380443 OR10J6PQ8NGY7 276 aa17.58■□□□□ 0.41
VPS16-201ENST00000380443 VAMP8Q9BV40 100 aa17.58■□□□□ 0.41
VPS16-201ENST00000380443 TMEM191AQ9H0A3 160 aa17.58■□□□□ 0.4
VPS16-201ENST00000380443 PMCHL1Q16048 86 aa17.57■□□□□ 0.4
VPS16-201ENST00000380443 ZNF575Q86XF7 245 aa17.57■□□□□ 0.4
VPS16-201ENST00000380443 KRTAP1-3Q8IUG1 177 aa17.57■□□□□ 0.4
VPS16-201ENST00000380443 LINC00469Q8N7U9 141 aa17.57■□□□□ 0.4
VPS16-201ENST00000380443 WFDC11Q8NEX6 87 aa17.57■□□□□ 0.4
VPS16-201ENST00000380443 Q96MF0 132 aa17.57■□□□□ 0.4
VPS16-201ENST00000380443 PRRC2AP48634 2157 aaKnown RBP17.57■□□□□ 0.4
VPS16-201ENST00000380443 BTF3P20290 206 aaKnown RBP17.56■□□□□ 0.4
VPS16-201ENST00000380443 C14orf144Q96I85 54 aa17.56■□□□□ 0.4
VPS16-201ENST00000380443 RNF114Q9Y508 228 aa17.56■□□□□ 0.4
VPS16-201ENST00000380443 TWIST1Q15672 202 aa17.56■□□□□ 0.4
VPS16-201ENST00000380443 ORMDL3Q8N138 153 aa17.56■□□□□ 0.4
VPS16-201ENST00000380443 C20orf173Q96LM9 149 aa17.56■□□□□ 0.4
VPS16-201ENST00000380443 TMEM213A2RRL7 107 aa17.55■□□□□ 0.4
VPS16-201ENST00000380443 TMEM95Q3KNT9 176 aa17.55■□□□□ 0.4
VPS16-201ENST00000380443 LCNL1Q6ZST4 164 aa17.55■□□□□ 0.4
VPS16-201ENST00000380443 CR1P17927 2039 aa17.55■□□□□ 0.4
VPS16-201ENST00000380443 VPS13CQ709C8 3753 aa17.55■□□□□ 0.4
VPS16-201ENST00000380443 ID1P41134 155 aa17.54■□□□□ 0.4
VPS16-201ENST00000380443 TM4SF20Q53R12 229 aa17.54■□□□□ 0.4
VPS16-201ENST00000380443 MYOZ3Q8TDC0 251 aa17.54■□□□□ 0.4
VPS16-201ENST00000380443 MAP1AP78559 2803 aaPredicted RBP17.54■□□□□ 0.4
VPS16-201ENST00000380443 PPBPP02775 128 aa17.54■□□□□ 0.4
VPS16-201ENST00000380443 LBHQ53QV2 105 aaPredicted RBP17.54■□□□□ 0.4
VPS16-201ENST00000380443 RNF152Q8N8N0 203 aa17.54■□□□□ 0.4
VPS16-201ENST00000380443 ZNF702PQ9H963 129 aa17.54■□□□□ 0.4
VPS16-201ENST00000380443 IGKV3D-20A0A0C4DH25 116 aa17.53■□□□□ 0.4
VPS16-201ENST00000380443 IGHV1-24A0A0C4DH33 117 aa17.53■□□□□ 0.4
VPS16-201ENST00000380443 C2orf70A6NJV1 201 aa17.53■□□□□ 0.4
VPS16-201ENST00000380443 RPL11P62913 178 aaKnown RBP17.53■□□□□ 0.4
VPS16-201ENST00000380443 PRELID3AQ96N28 172 aa17.52■□□□□ 0.4
VPS16-201ENST00000380443 TMEM70Q9BUB7 260 aa17.52■□□□□ 0.4
VPS16-201ENST00000380443 AP5S1Q9NUS5 200 aa17.52■□□□□ 0.4
VPS16-201ENST00000380443 LAMTOR2Q9Y2Q5 125 aa17.52■□□□□ 0.4
VPS16-201ENST00000380443 CRXO43186 299 aaPredicted RBP17.51■□□□□ 0.39
VPS16-201ENST00000380443 LEPROTL1O95214 131 aa17.51■□□□□ 0.39
VPS16-201ENST00000380443 MRPL51Q4U2R6 128 aaKnown RBP17.51■□□□□ 0.39
VPS16-201ENST00000380443 EBLN2Q6P2I7 272 aa17.51■□□□□ 0.39
VPS16-201ENST00000380443 FA2HQ7L5A8 372 aa17.51■□□□□ 0.39
VPS16-201ENST00000380443 AMN1Q8IY45 258 aa17.51■□□□□ 0.39
VPS16-201ENST00000380443 PRSS3P2Q8NHM4 247 aa17.51■□□□□ 0.39
VPS16-201ENST00000380443 UBE2E2Q96LR5 201 aa17.51■□□□□ 0.39
VPS16-201ENST00000380443 HSPB8Q9UJY1 196 aa17.51■□□□□ 0.39
VPS16-201ENST00000380443 CELSR1Q9NYQ6 3014 aa17.51■□□□□ 0.39
VPS16-201ENST00000380443 LGALS9O00182 355 aa17.51■□□□□ 0.39
VPS16-201ENST00000380443 HOXA3O43365 443 aaPredicted RBP17.51■□□□□ 0.39
VPS16-201ENST00000380443 LGALS1P09382 135 aaKnown RBP17.51■□□□□ 0.39
VPS16-201ENST00000380443 CACNG7P62955 275 aa17.51■□□□□ 0.39
VPS16-201ENST00000380443 Q8N2B8 174 aa17.51■□□□□ 0.39
VPS16-201ENST00000380443 CSPG4Q6UVK1 2322 aa17.5■□□□□ 0.39
VPS16-201ENST00000380443 TRAV21A0A0B4J279 112 aa17.5■□□□□ 0.39
VPS16-201ENST00000380443 D6R8Y8 96 aa17.5■□□□□ 0.39
VPS16-201ENST00000380443 PRR31Q5SQ13 230 aa17.5■□□□□ 0.39
VPS16-201ENST00000380443 APRG1Q8IVJ8 170 aa17.5■□□□□ 0.39
VPS16-201ENST00000380443 TMEM86BQ8N661 226 aa17.5■□□□□ 0.39
VPS16-201ENST00000380443 FAM19A4Q96LR4 140 aa17.5■□□□□ 0.39
VPS16-201ENST00000380443 IGHV4-4A0A075B6R2 117 aa17.49■□□□□ 0.39
VPS16-201ENST00000380443 C20orf202A1L168 122 aa17.49■□□□□ 0.39
VPS16-201ENST00000380443 OR8A1Q8NGG7 326 aa17.49■□□□□ 0.39
VPS16-201ENST00000380443 MIEN1Q9BRT3 115 aa17.49■□□□□ 0.39
VPS16-201ENST00000380443 ITPR3Q14573 2671 aa17.49■□□□□ 0.39
VPS16-201ENST00000380443 M0QZ24 198 aa17.49■□□□□ 0.39
VPS16-201ENST00000380443 RPLP1P05386 114 aaKnown RBP17.49■□□□□ 0.39
VPS16-201ENST00000380443 CKS2P33552 79 aa17.49■□□□□ 0.39
VPS16-201ENST00000380443 MRPL52Q86TS9 123 aaKnown RBP17.49■□□□□ 0.39
VPS16-201ENST00000380443 C11orf21Q9P2W6 132 aa17.49■□□□□ 0.39
VPS16-201ENST00000380443 SNAI2O43623 268 aa17.48■□□□□ 0.39
VPS16-201ENST00000380443 SMIM15Q7Z3B0 74 aa17.48■□□□□ 0.39
VPS16-201ENST00000380443 ZFAND2AQ8N6M9 145 aa17.48■□□□□ 0.39
VPS16-201ENST00000380443 PAM16Q9Y3D7 125 aa17.48■□□□□ 0.39
VPS16-201ENST00000380443 TDRG1Q3Y452 100 aa17.47■□□□□ 0.39
VPS16-201ENST00000380443 KLHDC1Q8N7A1 406 aa17.47■□□□□ 0.39
VPS16-201ENST00000380443 CSN3P07498 182 aa17.47■□□□□ 0.39
VPS16-201ENST00000380443 FOSL1P15407 271 aa17.47■□□□□ 0.39
VPS16-201ENST00000380443 OR10AG1Q8NH19 301 aa17.47■□□□□ 0.39
VPS16-201ENST00000380443 MAP1LC3CQ9BXW4 147 aa17.46■□□□□ 0.39
VPS16-201ENST00000380443 MED14OSP0DP75 135 aa17.45■□□□□ 0.38
VPS16-201ENST00000380443 PET117Q6UWS5 81 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms