RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 MRPS12O15235 138 aaKnown RBP5.83□□□□□ -1.48
CDKL5-201ENST00000379989 ATP5LO75964 103 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 LHBP01229 141 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 PMVKQ15126 192 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 Q86TA4 180 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 VKORC1Q9BQB6 163 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 IGHV3-43A0A0B4J1X8 118 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 PLAUP00749 431 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 TCRAP04437 139 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 CRYGDP07320 174 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 CD3EP07766 207 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 IGHV3-43DP0DP04 118 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 MRPL20Q9BYC9 149 aaKnown RBP5.83□□□□□ -1.48
CDKL5-201ENST00000379989 SDK1Q7Z5N4 2213 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 DEFB108AA8MXU0 73 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 ZNF134P52741 427 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 ERVK-16P61578 105 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 SIGLEC15Q6ZMC9 328 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 SEM1Q6ZVN7 128 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 WDR86Q86TI4 376 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 DSCAML1Q8TD84 2053 aa5.83□□□□□ -1.48
CDKL5-201ENST00000379989 BSNQ9UPA5 3926 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 LINC01546A6NGU7 62 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 COX7A2P2O60397 106 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 SEC61GP60059 68 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 C10orf113Q5VZT2 155 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 GAGE2AQ6NT46 116 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 TMEM190Q8WZ59 177 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 ZNF714Q96N38 554 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 RNF7Q9UBF6 113 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 SPENQ96T58 3664 aaKnown RBP5.82□□□□□ -1.48
CDKL5-201ENST00000379989 OVOL1O14753 267 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 NDUFA3O95167 84 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 DPH3Q96FX2 82 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 MED13Q9UHV7 2174 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 CKS2P33552 79 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 CYSTM1Q9H1C7 97 aa5.82□□□□□ -1.48
CDKL5-201ENST00000379989 IGLV2-11P01706 119 aa5.81□□□□□ -1.48
CDKL5-201ENST00000379989 PRDX2P32119 198 aa5.81□□□□□ -1.48
CDKL5-201ENST00000379989 DTX2Q86UW9 622 aa5.81□□□□□ -1.48
CDKL5-201ENST00000379989 MYOZ3Q8TDC0 251 aa5.81□□□□□ -1.48
CDKL5-201ENST00000379989 PLEKHB2Q96CS7 222 aa5.81□□□□□ -1.48
CDKL5-201ENST00000379989 TMEM14BQ9NUH8 114 aa5.81□□□□□ -1.48
CDKL5-201ENST00000379989 LINC00527Q9UJ94 153 aa5.81□□□□□ -1.48
CDKL5-201ENST00000379989 INS-IGF2F8WCM5 200 aa5.81□□□□□ -1.48
CDKL5-201ENST00000379989 H3BTX0 84 aa5.81□□□□□ -1.48
CDKL5-201ENST00000379989 CFC1BP0CG36 223 aa5.81□□□□□ -1.48
CDKL5-201ENST00000379989 CFC1P0CG37 223 aa5.81□□□□□ -1.48
CDKL5-201ENST00000379989 CD40P25942 277 aa5.81□□□□□ -1.48
CDKL5-201ENST00000379989 PRNTQ86SH4 94 aa5.81□□□□□ -1.48
CDKL5-201ENST00000379989 OTOGLQ3ZCN5 2332 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 H3BMM0 161 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 PSPNO60542 156 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 CRYGAP11844 174 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 LINC01559Q495D7 138 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 UBE2WQ96B02 151 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 LINC01600Q96MT4 127 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 SPANXCQ9NY87 97 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 FOXA2Q9Y261 457 aaPredicted RBP5.8□□□□□ -1.48
CDKL5-201ENST00000379989 TINCRA0A1B0GVN0 87 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 GAS8-AS1O95177 125 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 MALP21145 153 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 LYZL1Q6UWQ5 148 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 LINC00305Q7Z4B0 112 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 ASPMQ8IZT6 3477 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 GRPP07492 148 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 COX7CP15954 63 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 C2orf48Q96LS8 159 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 Q9H3A6 140 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 JPT2Q9H910 190 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 PRO0628Q9UI54 55 aa5.8□□□□□ -1.48
CDKL5-201ENST00000379989 FAM240AA0A1B0GVK7 77 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 PLNP26678 52 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 DLX6P56179 175 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 CD69Q07108 199 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 EDDM3AQ14507 147 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 GFRALQ6UXV0 394 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 IMUPQ9GZP8 106 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 KAAG1Q9UBP8 84 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 FREM1Q5H8C1 2179 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 hADV29S1A0JD25 119 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 M0R1B8 84 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 ELANEP08246 267 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 CGB3P0DN86 165 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 CGB7P0DN87 165 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 CRIP1P50238 77 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 KLRB1Q12918 225 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 LINC01620Q4KN68 170 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 RPL39P5Q59GN2 51 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 CTSZQ9UBR2 303 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 ZNF292O60281 2723 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 ZNF815PA8K554 130 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 SCGB1D4Q6XE38 83 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 DSCR8Q96T75 97 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 C1orf43Q9BWL3 253 aa5.79□□□□□ -1.48
CDKL5-201ENST00000379989 NCOR1O75376 2440 aa5.78□□□□□ -1.48
CDKL5-201ENST00000379989 ZNF22P17026 224 aaPredicted RBP5.78□□□□□ -1.48
CDKL5-201ENST00000379989 RPL35AP18077 110 aaKnown RBP5.78□□□□□ -1.48
CDKL5-201ENST00000379989 HLA-DMBP28068 263 aa5.78□□□□□ -1.48
CDKL5-201ENST00000379989 GOLT1AQ6ZVE7 132 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms