RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 IGHG4P01861 327 aa6.35□□□□□ -1.39
PTPRR-203ENST00000378778 ASIPP42127 132 aa6.35□□□□□ -1.39
PTPRR-203ENST00000378778 HERVK_113P61574 105 aa6.35□□□□□ -1.39
PTPRR-203ENST00000378778 ERCC8Q13216 396 aa6.35□□□□□ -1.39
PTPRR-203ENST00000378778 NEXN-AS1Q8NBZ9 246 aa6.35□□□□□ -1.39
PTPRR-203ENST00000378778 LY6G5BQ8NDX9 201 aa6.35□□□□□ -1.39
PTPRR-203ENST00000378778 CDIP1Q9H305 208 aa6.35□□□□□ -1.39
PTPRR-203ENST00000378778 DCHS1Q96JQ0 3298 aa6.35□□□□□ -1.39
PTPRR-203ENST00000378778 SPINK8P0C7L1 97 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 TMEM78Q5T7P6 136 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 DYNLRB1Q9NP97 96 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 ERG28Q9UKR5 140 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 CACNA1BQ00975 2339 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 F8W735 103 aaPredicted RBP6.34□□□□□ -1.39
PTPRR-203ENST00000378778 M0R1W7 72 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 LGALS1P09382 135 aaKnown RBP6.34□□□□□ -1.39
PTPRR-203ENST00000378778 FAM27E3Q08E93 113 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 C9orf47Q6ZRZ4 202 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 Q6ZUT4 128 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 WFDC3Q8IUB2 231 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 SYT8Q8NBV8 401 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 CFHR4Q92496 578 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 PGPEP1Q9NXJ5 209 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 SMAD5-AS1Q9Y6J3 95 aa6.34□□□□□ -1.39
PTPRR-203ENST00000378778 PRRG2O14669 202 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 APELAP0DMC3 54 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 SCGB3A1Q96QR1 104 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 MSRB1Q9NZV6 116 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 TRIOO75962 3097 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 MALRD1Q5VYJ5 2156 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 AHCTF1Q8WYP5 2266 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 TRAV26-1A0A087WT03 109 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 A8MWV9 139 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 TIMM23O14925 209 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 BSPH1Q075Z2 132 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 EBI3Q14213 229 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 TTTY13Q9BZ97 58 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 LAMA1P25391 3075 aa6.33□□□□□ -1.4
PTPRR-203ENST00000378778 ZFHX2Q9C0A1 2572 aaPredicted RBP6.33□□□□□ -1.4
PTPRR-203ENST00000378778 IGHV7-4-1A0A0J9YVY3 117 aa6.32□□□□□ -1.4
PTPRR-203ENST00000378778 TRBV7-9A0A0J9YWB2 115 aa6.32□□□□□ -1.4
PTPRR-203ENST00000378778 GOSR1O95249 250 aa6.32□□□□□ -1.4
PTPRR-203ENST00000378778 CTSGP08311 255 aa6.32□□□□□ -1.4
PTPRR-203ENST00000378778 ZNF688P0C7X2 276 aa6.32□□□□□ -1.4
PTPRR-203ENST00000378778 Q6Q795 121 aa6.32□□□□□ -1.4
PTPRR-203ENST00000378778 DYNAPQ8N1N2 210 aa6.32□□□□□ -1.4
PTPRR-203ENST00000378778 IGKV3D-20A0A0C4DH25 116 aa6.32□□□□□ -1.4
PTPRR-203ENST00000378778 COX6B1P14854 86 aa6.32□□□□□ -1.4
PTPRR-203ENST00000378778 Q5PR19 223 aa6.32□□□□□ -1.4
PTPRR-203ENST00000378778 POM121L12Q8N7R1 296 aa6.32□□□□□ -1.4
PTPRR-203ENST00000378778 Q8TAT8 98 aa6.32□□□□□ -1.4
PTPRR-203ENST00000378778 ODF3BA8MYP8 253 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 CD7P09564 240 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 SUMO2P61956 95 aaKnown RBP6.31□□□□□ -1.4
PTPRR-203ENST00000378778 MINOS1Q5TGZ0 78 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 SPANXN1Q5VSR9 72 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 ZFAND6Q6FIF0 208 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 GLMPQ8WWB7 406 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 TMEM141Q96I45 108 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 SPANXDQ9BXN6 97 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 DPH3P1Q9H4G8 78 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 MINOS1-NBL1R4GNA1 71 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 MYO15AQ9UKN7 3530 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 ZNF815PA8K554 130 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 BUB3O43684 328 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 SMCPP49901 116 aaPredicted RBP6.31□□□□□ -1.4
PTPRR-203ENST00000378778 LPAL2Q16609 132 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 AMTNQ6UX39 209 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 Q8N6K4 173 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 FAM110DQ8TAY7 271 aaPredicted RBP6.31□□□□□ -1.4
PTPRR-203ENST00000378778 PRADC1Q9BSG0 188 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 ZFHX4Q86UP3 3567 aa6.31□□□□□ -1.4
PTPRR-203ENST00000378778 RNF223E7ERA6 249 aa6.3□□□□□ -1.4
PTPRR-203ENST00000378778 SRSF9Q13242 221 aaKnown RBP eCLIP6.3□□□□□ -1.4
PTPRR-203ENST00000378778 MRPL23Q16540 153 aaKnown RBP6.3□□□□□ -1.4
PTPRR-203ENST00000378778 SELENOKQ9Y6D0 94 aa6.3□□□□□ -1.4
PTPRR-203ENST00000378778 WDR87Q6ZQQ6 2873 aa6.3□□□□□ -1.4
PTPRR-203ENST00000378778 HLA-DMBP28068 263 aa6.3□□□□□ -1.4
PTPRR-203ENST00000378778 ATP5G2Q06055 141 aa6.3□□□□□ -1.4
PTPRR-203ENST00000378778 GAGE5Q13069 117 aa6.3□□□□□ -1.4
PTPRR-203ENST00000378778 GAGE6Q13070 117 aa6.3□□□□□ -1.4
PTPRR-203ENST00000378778 DEFB109BQ30KR1 87 aa6.3□□□□□ -1.4
PTPRR-203ENST00000378778 SCGB1D4Q6XE38 83 aa6.3□□□□□ -1.4
PTPRR-203ENST00000378778 NDUFA11Q86Y39 141 aa6.3□□□□□ -1.4
PTPRR-203ENST00000378778 BAALCQ8WXS3 180 aa6.3□□□□□ -1.4
PTPRR-203ENST00000378778 LINC00477Q96M19 166 aa6.3□□□□□ -1.4
PTPRR-203ENST00000378778 AGPAT4-IT1Q9H0P7 198 aa6.3□□□□□ -1.4
PTPRR-203ENST00000378778 PLXNB1O43157 2135 aa6.29□□□□□ -1.4
PTPRR-203ENST00000378778 GAS8-AS1O95177 125 aa6.29□□□□□ -1.4
PTPRR-203ENST00000378778 P0DMU3 169 aa6.29□□□□□ -1.4
PTPRR-203ENST00000378778 FAM231AP0DMU4 169 aa6.29□□□□□ -1.4
PTPRR-203ENST00000378778 FAM231CP0DMU5 169 aa6.29□□□□□ -1.4
PTPRR-203ENST00000378778 GATA1P15976 413 aaPredicted RBP6.29□□□□□ -1.4
PTPRR-203ENST00000378778 SRD5A1P18405 259 aa6.29□□□□□ -1.4
PTPRR-203ENST00000378778 PRTN3P24158 256 aa6.29□□□□□ -1.4
PTPRR-203ENST00000378778 COX7A1P24310 79 aa6.29□□□□□ -1.4
PTPRR-203ENST00000378778 PSMB2P49721 201 aa6.29□□□□□ -1.4
PTPRR-203ENST00000378778 C22orf34Q6ZV56 151 aa6.29□□□□□ -1.4
PTPRR-203ENST00000378778 PIP4P1Q86T03 277 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms