RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 RNF223E7ERA6 249 aa8.63□□□□□ -1.03
PCDHGA1-201ENST00000378105 TRPT1Q86TN4 253 aaKnown RBP8.63□□□□□ -1.03
PCDHGA1-201ENST00000378105 LOXL3P58215 753 aa8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 C10orf55Q5SWW7 151 aa8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 MIC13Q5XKP0 118 aa8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 TMEM219Q86XT9 240 aa8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 OR4X2Q8NGF9 303 aa8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 SMCPP49901 116 aaPredicted RBP8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 POU2AF1Q16633 256 aa8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 SPRNQ5BIV9 151 aa8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 RNF152Q8N8N0 203 aa8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 MRAPQ8TCY5 172 aa8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 C1orf147Q96MC9 270 aaPredicted RBP8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 MAP1AP78559 2803 aaPredicted RBP8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 ZNF688P0C7X2 276 aa8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 NPIPB3Q92617 1050 aa8.62□□□□□ -1.03
PCDHGA1-201ENST00000378105 A8MWL6 223 aa8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 TMEM155Q4W5P6 130 aa8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 C15orf53Q8NAA6 179 aa8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 AAMDCQ9H7C9 122 aa8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 SIGLEC8Q9NYZ4 499 aa8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 PRRC2AP48634 2157 aaKnown RBP8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 NPIPB11E5RHQ5 1161 aa8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 ORM1P02763 201 aa8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 AMY1AP04745 511 aa8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 SAA1P0DJI8 122 aaPredicted RBP8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 LINC00336Q6ZUF6 198 aa8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 NABP2Q9BQ15 211 aa8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 HLA-DQA1P01909 254 aa8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 RPL30P62888 115 aaKnown RBP8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 PQLC2Q6ZP29 291 aa8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 YTHDF2Q9Y5A9 579 aaKnown RBP8.61□□□□□ -1.03
PCDHGA1-201ENST00000378105 IGHV1-8P0DP01 117 aa8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 SRD5A1P18405 259 aa8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 RBAKDNA6NC62 111 aa8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 IGHV3-11P01762 117 aa8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 DUTP33316 252 aaKnown RBP8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 EFNB3Q15768 340 aa8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 Q71RC1 249 aaPredicted RBP8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 LRRC75A-AS1Q8N1F1 130 aa8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 ZNF502Q8TBZ5 544 aa8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 HTN1P15515 57 aa8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 C22orf34Q6ZV56 151 aa8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 C18orf12Q96KH6 178 aa8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 PRO0461Q9UI25 63 aa8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 DSCAMO60469 2012 aa8.6□□□□□ -1.03
PCDHGA1-201ENST00000378105 MPDU1O75352 247 aa8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 CD7P09564 240 aa8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 ZFP2Q6ZN57 461 aa8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 VMO1Q7Z5L0 202 aa8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 TAF15Q92804 592 aaKnown RBP eCLIP8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 RAI1Q7Z5J4 1906 aaPredicted RBP8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 CTXND1A0A1B0GTU2 59 aa8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 SHISA9B4DS77 424 aa8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 NDUFA7O95182 113 aa8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 CX3CL1P78423 397 aa8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 C10orf113Q5VZT2 155 aa8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 PPDPFLQ8WWR9 84 aa8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 IGLV3-9A0A075B6K5 115 aa8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 FGF6P10767 208 aa8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 TMEM30BQ3MIR4 351 aa8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 CIARTQ8N365 385 aaPredicted RBP8.59□□□□□ -1.03
PCDHGA1-201ENST00000378105 TFF3Q07654 80 aa8.59□□□□□ -1.04
PCDHGA1-201ENST00000378105 URB1-AS1Q96HZ7 61 aa8.59□□□□□ -1.04
PCDHGA1-201ENST00000378105 IGKV1-6A0A0C4DH72 117 aa8.58□□□□□ -1.04
PCDHGA1-201ENST00000378105 CACNG7P62955 275 aa8.58□□□□□ -1.04
PCDHGA1-201ENST00000378105 GDF5OSQ5U4N7 250 aa8.58□□□□□ -1.04
PCDHGA1-201ENST00000378105 PDPNQ86YL7 162 aa8.58□□□□□ -1.04
PCDHGA1-201ENST00000378105 ITLN2Q8WWU7 325 aaPredicted RBP8.58□□□□□ -1.04
PCDHGA1-201ENST00000378105 FGF23Q9GZV9 251 aaPredicted RBP8.58□□□□□ -1.04
PCDHGA1-201ENST00000378105 EPDR1Q9UM22 224 aa8.58□□□□□ -1.04
PCDHGA1-201ENST00000378105 V9GYV3 84 aa8.58□□□□□ -1.04
PCDHGA1-201ENST00000378105 E9PLD3 99 aa8.58□□□□□ -1.04
PCDHGA1-201ENST00000378105 NSUN5P1Q3KNT7 163 aa8.58□□□□□ -1.04
PCDHGA1-201ENST00000378105 C10orf105Q8TEF2 133 aa8.58□□□□□ -1.04
PCDHGA1-201ENST00000378105 LINC00473A8K010 186 aa8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 TRGV3P03979 118 aa8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 FAM120AOSQ5T036 256 aa8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 ACANP16112 2415 aa8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 TNCP24821 2201 aa8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 IGHV3-66A0A0C4DH42 116 aa8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 CGB1A6NKQ9 187 aa8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 B4DSR2 109 aa8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 MSMPQ1L6U9 139 aa8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 JPT2Q9H910 190 aa8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 A0A0G2JRQ6 117 aa8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 LOC389332A0A1B0GUA5 103 aa8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 CEMP1Q6PRD7 247 aaPredicted RBP8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 SRSF12Q8WXF0 261 aaKnown RBP8.57□□□□□ -1.04
PCDHGA1-201ENST00000378105 CENPEQ02224 2701 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 NBR2O15453 112 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 DOPEY1Q5JWR5 2465 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 ZNF493Q6ZR52 646 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 ANKRD29Q8N6D5 301 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 IGFBPL1Q8WX77 278 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 PRORYQ9H606 182 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 TRAV3A0A0B4J244 114 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 PRB4P10163 310 aaPredicted RBP8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 SERF2P84101 59 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms