RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 J3QKU1 62 aa8.56□□□□□ -1.04
RTN3-206ENST00000377819 SPART-AS1P0CW21 52 aa8.56□□□□□ -1.04
RTN3-206ENST00000377819 C3orf22Q8N5N4 141 aa8.56□□□□□ -1.04
RTN3-206ENST00000377819 PRDM6Q9NQX0 595 aa8.56□□□□□ -1.04
RTN3-206ENST00000377819 IL15RAQ13261 267 aa8.56□□□□□ -1.04
RTN3-206ENST00000377819 PRR31Q5SQ13 230 aa8.56□□□□□ -1.04
RTN3-206ENST00000377819 C5orf38Q86SI9 138 aa8.56□□□□□ -1.04
RTN3-206ENST00000377819 GLRX5Q86SX6 157 aa8.56□□□□□ -1.04
RTN3-206ENST00000377819 C9orf118A6NHY6 69 aa8.56□□□□□ -1.04
RTN3-206ENST00000377819 ATP5G1P05496 136 aa8.56□□□□□ -1.04
RTN3-206ENST00000377819 YPEL3P61236 119 aaPredicted RBP8.56□□□□□ -1.04
RTN3-206ENST00000377819 B5MCH6 92 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 H0YIZ8 118 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 IGKV1D-12P01611 117 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 IGLV2-23P01705 113 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 PRSS46E5RG02 174 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 TFF1P04155 84 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 SCN2AQ99250 2005 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 ELANEP08246 267 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 CFC1BP0CG36 223 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 CFC1P0CG37 223 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 NMSQ5H8A3 153 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 IL17DQ8TAD2 202 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 COX7B2Q8TF08 81 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 LYZL4Q96KX0 146 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 K7EP13 123 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 TMEM14EPQ6UXP3 125 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 Q9H8V8 135 aa8.55□□□□□ -1.04
RTN3-206ENST00000377819 DYNAPQ8N1N2 210 aa8.54□□□□□ -1.04
RTN3-206ENST00000377819 C8orf49Q96NF6 230 aa8.54□□□□□ -1.04
RTN3-206ENST00000377819 PRRC2AP48634 2157 aaKnown RBP8.54□□□□□ -1.04
RTN3-206ENST00000377819 LTAP01374 205 aa8.54□□□□□ -1.04
RTN3-206ENST00000377819 TRPM7Q96QT4 1865 aa8.54□□□□□ -1.04
RTN3-206ENST00000377819 TMEM213A2RRL7 107 aa8.54□□□□□ -1.04
RTN3-206ENST00000377819 FNDC10F2Z333 226 aa8.54□□□□□ -1.04
RTN3-206ENST00000377819 HS3ST6Q96QI5 342 aa8.54□□□□□ -1.04
RTN3-206ENST00000377819 ICOSQ9Y6W8 199 aa8.54□□□□□ -1.04
RTN3-206ENST00000377819 FER1L5A0AVI2 2057 aa8.54□□□□□ -1.04
RTN3-206ENST00000377819 COX7A2LO14548 114 aa8.54□□□□□ -1.04
RTN3-206ENST00000377819 IGLC2P0DOY2 106 aa8.54□□□□□ -1.04
RTN3-206ENST00000377819 IGLC3P0DOY3 106 aa8.54□□□□□ -1.04
RTN3-206ENST00000377819 Q6ZQT7 251 aa8.54□□□□□ -1.04
RTN3-206ENST00000377819 FRMPD3Q5JV73 1810 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 IGHV1-69DA0A0B4J2H0 117 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 JMJD7-PLA2G4BH0Y9G9 81 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 H3BMG7 143 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 J3QLI3 93 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 NDUFA1O15239 70 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 EFNA2O43921 213 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 IGHV1-69P01742 117 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 CXCL1P09341 107 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 SEM1Q6ZVN7 128 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 Q96MF0 132 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 ZNF492Q9P255 531 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 FGF16O43320 207 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 ZNF493Q6ZR52 646 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 DEFB125Q8N687 156 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 MRPL35Q9NZE8 188 aaKnown RBP8.53□□□□□ -1.04
RTN3-206ENST00000377819 ATP6V0E1O15342 81 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 KIF26BQ2KJY2 2108 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 Q71RC1 249 aaPredicted RBP8.53□□□□□ -1.04
RTN3-206ENST00000377819 PYGO2Q9BRQ0 406 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 A0A1B0GUS0 222 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 NCOR1P1Q9H4R4 102 aa8.53□□□□□ -1.04
RTN3-206ENST00000377819 NPYP01303 97 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 B9D2Q9BPU9 175 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 SERP1Q9Y6X1 66 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 RALGAPA2Q2PPJ7 1873 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 MUC4Q99102 2169 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 IGKV1-9A0A0C4DH69 117 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 NTF4P34130 210 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 MRPL53Q96EL3 112 aaKnown RBP8.52□□□□□ -1.05
RTN3-206ENST00000377819 C20orf78Q9BR46 151 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 LGALS9BQ3B8N2 356 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 LGALS9CQ6DKI2 356 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 FGFBP3Q8TAT2 258 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 SND1-IT1Q9HBX3 110 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 KLF2Q9Y5W3 355 aaPredicted RBP8.52□□□□□ -1.05
RTN3-206ENST00000377819 MALRD1Q5VYJ5 2156 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 DOCK11Q5JSL3 2073 aa8.52□□□□□ -1.05
RTN3-206ENST00000377819 PDE6GP18545 87 aa8.51□□□□□ -1.05
RTN3-206ENST00000377819 NOP10Q9NPE3 64 aaKnown RBP8.51□□□□□ -1.05
RTN3-206ENST00000377819 J3KT08 172 aa8.51□□□□□ -1.05
RTN3-206ENST00000377819 GGNQ86UU5 652 aa8.51□□□□□ -1.05
RTN3-206ENST00000377819 ATP6V0E2Q8NHE4 81 aa8.51□□□□□ -1.05
RTN3-206ENST00000377819 RNF183Q96D59 192 aa8.51□□□□□ -1.05
RTN3-206ENST00000377819 SPANXB1Q9NS25 103 aaPredicted RBP8.51□□□□□ -1.05
RTN3-206ENST00000377819 CHD3Q12873 2000 aaKnown RBP8.51□□□□□ -1.05
RTN3-206ENST00000377819 PYY3Q5JQD4 70 aa8.51□□□□□ -1.05
RTN3-206ENST00000377819 PRSS57Q6UWY2 283 aa8.51□□□□□ -1.05
RTN3-206ENST00000377819 TMEM75Q8N9X5 138 aa8.51□□□□□ -1.05
RTN3-206ENST00000377819 Q0VG73 95 aa8.51□□□□□ -1.05
RTN3-206ENST00000377819 TRAV3A0A0B4J244 114 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 C8orf86Q6ZUL3 223 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 IGLV3-12A0A075B6K2 115 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 A0A0B4J2C4 111 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 IGKV3D-7A0A0C4DH55 119 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 A0A1B0GW64 132 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 C5orf63A6NC05 138 aa8.5□□□□□ -1.05
RTN3-206ENST00000377819 C9orf66Q5T8R8 295 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms