RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 ZANQ9Y493 2812 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 IGHV3-66A0A0C4DH42 116 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 A0A0G2JNJ9 132 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 PRSS29PA6NIE9 313 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 IGLL5B9A064 214 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 TRGV9Q99603 122 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 Q9UFV3 132 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 IGHV3-49A0A0A0MS15 119 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 ZNF785A8K8V0 405 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 SH2D1AO60880 128 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 IGKCP01834 107 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 CLEC3BP05452 202 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 PGPEP1Q9NXJ5 209 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 SLC25A15Q9Y619 301 aa9.61□□□□□ -0.87
SF1-204ENST00000377390 TEX29Q8N6K0 151 aa9.6□□□□□ -0.87
SF1-204ENST00000377390 TMEM158Q8WZ71 300 aa9.6□□□□□ -0.87
SF1-204ENST00000377390 ONECUT1Q9UBC0 465 aa9.6□□□□□ -0.87
SF1-204ENST00000377390 TMEM8BA6NDV4 472 aa9.6□□□□□ -0.87
SF1-204ENST00000377390 NCBP2LA6PVI3 153 aaKnown RBP9.59□□□□□ -0.87
SF1-204ENST00000377390 SHISA2Q6UWI4 295 aa9.59□□□□□ -0.87
SF1-204ENST00000377390 MYCNOSP40205 109 aa9.59□□□□□ -0.87
SF1-204ENST00000377390 PPP1R27Q86WC6 154 aa9.59□□□□□ -0.87
SF1-204ENST00000377390 THAP8Q8NA92 274 aa9.59□□□□□ -0.87
SF1-204ENST00000377390 ZNF502Q8TBZ5 544 aa9.59□□□□□ -0.87
SF1-204ENST00000377390 C12orf74Q32Q52 190 aa9.59□□□□□ -0.87
SF1-204ENST00000377390 CD40P25942 277 aa9.58□□□□□ -0.88
SF1-204ENST00000377390 ZNF833PQ6ZTB9 187 aa9.58□□□□□ -0.88
SF1-204ENST00000377390 CEND1Q8N111 149 aa9.58□□□□□ -0.88
SF1-204ENST00000377390 RNF125Q96EQ8 232 aa9.58□□□□□ -0.88
SF1-204ENST00000377390 HLA-DMBP28068 263 aa9.58□□□□□ -0.88
SF1-204ENST00000377390 CRIP1P50238 77 aa9.58□□□□□ -0.88
SF1-204ENST00000377390 TTC32Q5I0X7 151 aa9.58□□□□□ -0.88
SF1-204ENST00000377390 PIP4P1Q86T03 277 aa9.58□□□□□ -0.88
SF1-204ENST00000377390 SMPXQ9UHP9 88 aa9.58□□□□□ -0.88
SF1-204ENST00000377390 A0A1B0GW15 77 aa9.58□□□□□ -0.88
SF1-204ENST00000377390 DPM2O94777 84 aa9.58□□□□□ -0.88
SF1-204ENST00000377390 GAS8-AS1O95177 125 aa9.58□□□□□ -0.88
SF1-204ENST00000377390 TRBV19A0A075B6N1 114 aa9.57□□□□□ -0.88
SF1-204ENST00000377390 CR1LQ2VPA4 569 aa9.57□□□□□ -0.88
SF1-204ENST00000377390 C1orf162Q8NEQ5 155 aaPredicted RBP9.57□□□□□ -0.88
SF1-204ENST00000377390 MRPL35Q9NZE8 188 aaKnown RBP9.57□□□□□ -0.88
SF1-204ENST00000377390 LHBP01229 141 aa9.57□□□□□ -0.88
SF1-204ENST00000377390 UBTD1Q9HAC8 227 aa9.57□□□□□ -0.88
SF1-204ENST00000377390 A0A096LNJ9 63 aa9.57□□□□□ -0.88
SF1-204ENST00000377390 TRAV26-2A0A0B4J265 109 aa9.57□□□□□ -0.88
SF1-204ENST00000377390 SPRY2O43597 315 aa9.57□□□□□ -0.88
SF1-204ENST00000377390 ZFAND6Q6FIF0 208 aa9.57□□□□□ -0.88
SF1-204ENST00000377390 VKORC1Q9BQB6 163 aa9.57□□□□□ -0.88
SF1-204ENST00000377390 TRAV8-2A0A0B4J237 113 aa9.56□□□□□ -0.88
SF1-204ENST00000377390 VSTM5A8MXK1 200 aa9.56□□□□□ -0.88
SF1-204ENST00000377390 HOXA3O43365 443 aaPredicted RBP9.56□□□□□ -0.88
SF1-204ENST00000377390 IGLV1-44P01699 117 aa9.56□□□□□ -0.88
SF1-204ENST00000377390 EFNA4P52798 201 aa9.56□□□□□ -0.88
SF1-204ENST00000377390 Q6AWC8 147 aa9.56□□□□□ -0.88
SF1-204ENST00000377390 SIGLEC9Q9Y336 463 aa9.56□□□□□ -0.88
SF1-204ENST00000377390 LINC01549A6NIU2 74 aa9.56□□□□□ -0.88
SF1-204ENST00000377390 EGR2P11161 476 aaPredicted RBP9.56□□□□□ -0.88
SF1-204ENST00000377390 SPANXN1Q5VSR9 72 aa9.56□□□□□ -0.88
SF1-204ENST00000377390 BEX4Q9NWD9 120 aaPredicted RBP9.56□□□□□ -0.88
SF1-204ENST00000377390 NACAE9PAV3 2078 aa9.56□□□□□ -0.88
SF1-204ENST00000377390 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.55□□□□□ -0.88
SF1-204ENST00000377390 OR11H12B2RN74 326 aa9.55□□□□□ -0.88
SF1-204ENST00000377390 RPL7P18124 248 aaKnown RBP9.55□□□□□ -0.88
SF1-204ENST00000377390 XGP55808 180 aa9.55□□□□□ -0.88
SF1-204ENST00000377390 FOXI1Q12951 378 aa9.55□□□□□ -0.88
SF1-204ENST00000377390 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
SF1-204ENST00000377390 OR11H2Q8NH07 326 aa9.55□□□□□ -0.88
SF1-204ENST00000377390 TNFRSF6BO95407 300 aa9.55□□□□□ -0.88
SF1-204ENST00000377390 ERCC8Q13216 396 aa9.55□□□□□ -0.88
SF1-204ENST00000377390 KIR2DL4Q99706 377 aa9.55□□□□□ -0.88
SF1-204ENST00000377390 IGLV2-11P01706 119 aa9.55□□□□□ -0.88
SF1-204ENST00000377390 IGSF10Q6WRI0 2623 aa9.55□□□□□ -0.88
SF1-204ENST00000377390 IGKV3-7A0A075B6H7 116 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 IGKV1-17P01599 117 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 EMP1P54849 157 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 GAGE5Q13069 117 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 GAGE6Q13070 117 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 PIP4P2Q8N4L2 257 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 MAPK1IP1LQ8NDC0 245 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 ANKRD17O75179 2603 aaKnown RBP9.54□□□□□ -0.88
SF1-204ENST00000377390 FSTL3O95633 263 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 PRB1P04280 392 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 Q1RN00 199 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 TCTEX1D4Q5JR98 221 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 C1QTNF4Q9BXJ3 329 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 CDSNQ15517 529 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 MAPKAPK5-AS1Q8N8E1 139 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 SPATA25Q9BR10 227 aa9.54□□□□□ -0.88
SF1-204ENST00000377390 TNRC6BQ9UPQ9 1833 aaKnown RBP9.54□□□□□ -0.88
SF1-204ENST00000377390 PRRC2AP48634 2157 aaKnown RBP9.53□□□□□ -0.88
SF1-204ENST00000377390 SIVA1O15304 175 aa9.53□□□□□ -0.88
SF1-204ENST00000377390 SNCGO76070 127 aa9.53□□□□□ -0.88
SF1-204ENST00000377390 IGLV2-23P01705 113 aa9.53□□□□□ -0.88
SF1-204ENST00000377390 S100A4P26447 101 aaKnown RBP9.53□□□□□ -0.88
SF1-204ENST00000377390 SIGLEC15Q6ZMC9 328 aa9.53□□□□□ -0.88
SF1-204ENST00000377390 ZFP2Q6ZN57 461 aa9.53□□□□□ -0.88
SF1-204ENST00000377390 Q6ZUT4 128 aa9.53□□□□□ -0.88
SF1-204ENST00000377390 C17orf100A8MU93 164 aa9.53□□□□□ -0.88
SF1-204ENST00000377390 SHANK2-AS3Q9BTD1 123 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms