RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 MIR17HGQ75NE6 70 aa10.16□□□□□ -0.78
HDAC6-204ENST00000376643 Q8N1X5 172 aa10.16□□□□□ -0.78
HDAC6-204ENST00000376643 FAM167A-AS1Q96KT0 104 aa10.16□□□□□ -0.78
HDAC6-204ENST00000376643 WDR61Q9GZS3 305 aaKnown RBP10.16□□□□□ -0.78
HDAC6-204ENST00000376643 PGPEP1Q9NXJ5 209 aa10.16□□□□□ -0.78
HDAC6-204ENST00000376643 HHLA3Q9XRX5 114 aa10.16□□□□□ -0.78
HDAC6-204ENST00000376643 TRGV11A0A075B6L2 103 aa10.15□□□□□ -0.78
HDAC6-204ENST00000376643 NXPH4O95158 308 aa10.15□□□□□ -0.78
HDAC6-204ENST00000376643 ZNF266Q14584 549 aa10.15□□□□□ -0.78
HDAC6-204ENST00000376643 GCSAMLQ5JQS6 135 aa10.15□□□□□ -0.78
HDAC6-204ENST00000376643 NEGR1Q7Z3B1 354 aa10.15□□□□□ -0.78
HDAC6-204ENST00000376643 SPXQ9BT56 116 aa10.15□□□□□ -0.78
HDAC6-204ENST00000376643 BOLA1Q9Y3E2 137 aa10.15□□□□□ -0.78
HDAC6-204ENST00000376643 RYR1P21817 5038 aa10.14□□□□□ -0.79
HDAC6-204ENST00000376643 TRGV4A0A0C4DH28 118 aa10.14□□□□□ -0.79
HDAC6-204ENST00000376643 IFNA5P01569 189 aa10.14□□□□□ -0.79
HDAC6-204ENST00000376643 ORM1P02763 201 aa10.14□□□□□ -0.79
HDAC6-204ENST00000376643 CRYBA4P53673 196 aa10.14□□□□□ -0.79
HDAC6-204ENST00000376643 UBE2L3P68036 154 aaKnown RBP10.14□□□□□ -0.79
HDAC6-204ENST00000376643 LRRC37A5PQ49AS3 106 aa10.14□□□□□ -0.79
HDAC6-204ENST00000376643 FAM159AQ6UWV7 190 aa10.14□□□□□ -0.79
HDAC6-204ENST00000376643 SCGB1C1Q8TD33 95 aa10.14□□□□□ -0.79
HDAC6-204ENST00000376643 TMED6Q8WW62 240 aa10.14□□□□□ -0.79
HDAC6-204ENST00000376643 FXYD5Q96DB9 178 aa10.14□□□□□ -0.79
HDAC6-204ENST00000376643 ATP5SQ99766 215 aa10.14□□□□□ -0.79
HDAC6-204ENST00000376643 OR10J4P0C629 311 aa10.13□□□□□ -0.79
HDAC6-204ENST00000376643 SRIP30626 198 aa10.13□□□□□ -0.79
HDAC6-204ENST00000376643 SH2D6Q7Z4S9 175 aa10.13□□□□□ -0.79
HDAC6-204ENST00000376643 IQCF2Q8IXL9 164 aa10.13□□□□□ -0.79
HDAC6-204ENST00000376643 CMTM2Q8TAZ6 248 aa10.13□□□□□ -0.79
HDAC6-204ENST00000376643 BATF3Q9NR55 127 aa10.13□□□□□ -0.79
HDAC6-204ENST00000376643 MRPL16Q9NX20 251 aaKnown RBP10.13□□□□□ -0.79
HDAC6-204ENST00000376643 IGHV3-53P01767 116 aa10.12□□□□□ -0.79
HDAC6-204ENST00000376643 RANP62826 216 aaKnown RBP10.12□□□□□ -0.79
HDAC6-204ENST00000376643 Q6AWC8 147 aa10.12□□□□□ -0.79
HDAC6-204ENST00000376643 C10orf126Q8N4M7 172 aa10.12□□□□□ -0.79
HDAC6-204ENST00000376643 ARL6IP6Q8N6S5 226 aa10.12□□□□□ -0.79
HDAC6-204ENST00000376643 OR10G4Q8NGN3 311 aa10.12□□□□□ -0.79
HDAC6-204ENST00000376643 PHYHIPLQ96FC7 376 aa10.12□□□□□ -0.79
HDAC6-204ENST00000376643 TXNDC17Q9BRA2 123 aa10.12□□□□□ -0.79
HDAC6-204ENST00000376643 LY96Q9Y6Y9 160 aa10.12□□□□□ -0.79
HDAC6-204ENST00000376643 C9JCJ5 164 aa10.11□□□□□ -0.79
HDAC6-204ENST00000376643 UPK1BO75841 260 aa10.11□□□□□ -0.79
HDAC6-204ENST00000376643 EVI2AP22794 236 aa10.11□□□□□ -0.79
HDAC6-204ENST00000376643 FFAR4Q5NUL3 377 aa10.11□□□□□ -0.79
HDAC6-204ENST00000376643 PRR9Q5T870 116 aa10.11□□□□□ -0.79
HDAC6-204ENST00000376643 Q8TAT8 98 aa10.11□□□□□ -0.79
HDAC6-204ENST00000376643 RASL10AQ92737 203 aa10.11□□□□□ -0.79
HDAC6-204ENST00000376643 C8orf49Q96NF6 230 aa10.11□□□□□ -0.79
HDAC6-204ENST00000376643 SCRT2Q9NQ03 307 aa10.11□□□□□ -0.79
HDAC6-204ENST00000376643 OR5AC2Q9NZP5 309 aa10.11□□□□□ -0.79
HDAC6-204ENST00000376643 TP53TG3Q9ULZ0 132 aa10.11□□□□□ -0.79
HDAC6-204ENST00000376643 DIRC3C9JPN6 131 aa10.1□□□□□ -0.79
HDAC6-204ENST00000376643 INMT-MINDY4F8WBC2 141 aa10.1□□□□□ -0.79
HDAC6-204ENST00000376643 FHL2Q14192 279 aa10.1□□□□□ -0.79
HDAC6-204ENST00000376643 LYPD5Q6UWN5 251 aa10.1□□□□□ -0.79
HDAC6-204ENST00000376643 PQLC2Q6ZP29 291 aa10.1□□□□□ -0.79
HDAC6-204ENST00000376643 PPP1R1CQ8WVI7 109 aa10.1□□□□□ -0.79
HDAC6-204ENST00000376643 KRTAP4-5Q9BYR2 181 aa10.1□□□□□ -0.79
HDAC6-204ENST00000376643 OTORQ9NRC9 128 aa10.1□□□□□ -0.79
HDAC6-204ENST00000376643 HSPB11Q9Y547 144 aa10.1□□□□□ -0.79
HDAC6-204ENST00000376643 A0A1W2PPV4 95 aa10.09□□□□□ -0.79
HDAC6-204ENST00000376643 SIX6O95475 246 aa10.09□□□□□ -0.79
HDAC6-204ENST00000376643 DEFA1P59665 94 aa10.09□□□□□ -0.79
HDAC6-204ENST00000376643 DEFA3P59666 94 aa10.09□□□□□ -0.79
HDAC6-204ENST00000376643 KRTAP10-2P60368 255 aa10.09□□□□□ -0.79
HDAC6-204ENST00000376643 IFITM3Q01628 133 aa10.09□□□□□ -0.79
HDAC6-204ENST00000376643 TMEM183BQ1AE95 376 aa10.09□□□□□ -0.79
HDAC6-204ENST00000376643 ACOT6Q3I5F7 207 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-204ENST00000376643 TDRG1Q3Y452 100 aa10.09□□□□□ -0.79
HDAC6-204ENST00000376643 MUC21Q5SSG8 566 aa10.09□□□□□ -0.79
HDAC6-204ENST00000376643 Q6ZRN7 208 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-204ENST00000376643 TMEM183AQ8IXX5 376 aa10.09□□□□□ -0.79
HDAC6-204ENST00000376643 TRAV4A0A0B4J268 109 aa10.08□□□□□ -0.8
HDAC6-204ENST00000376643 TRAV21A0A0B4J279 112 aa10.08□□□□□ -0.8
HDAC6-204ENST00000376643 SERTM2A0A1B0GWG4 89 aa10.08□□□□□ -0.8
HDAC6-204ENST00000376643 K7EQD1 137 aa10.08□□□□□ -0.8
HDAC6-204ENST00000376643 M0R2P5 195 aa10.08□□□□□ -0.8
HDAC6-204ENST00000376643 SSNA1O43805 119 aa10.08□□□□□ -0.8
HDAC6-204ENST00000376643 CIDEAO60543 219 aa10.08□□□□□ -0.8
HDAC6-204ENST00000376643 KCNS1Q96KK3 526 aa10.08□□□□□ -0.8
HDAC6-204ENST00000376643 NDFIP1Q9BT67 221 aa10.08□□□□□ -0.8
HDAC6-204ENST00000376643 MSRB1Q9NZV6 116 aa10.08□□□□□ -0.8
HDAC6-204ENST00000376643 H0YIZ8 118 aa10.07□□□□□ -0.8
HDAC6-204ENST00000376643 MPC2O95563 127 aa10.07□□□□□ -0.8
HDAC6-204ENST00000376643 GYPEP15421 78 aa10.07□□□□□ -0.8
HDAC6-204ENST00000376643 RPL12P30050 165 aaKnown RBP10.07□□□□□ -0.8
HDAC6-204ENST00000376643 OR4C5Q8NGB2 326 aa10.07□□□□□ -0.8
HDAC6-204ENST00000376643 SDF2L1Q9HCN8 221 aa10.07□□□□□ -0.8
HDAC6-204ENST00000376643 NAGKQ9UJ70 344 aa10.07□□□□□ -0.8
HDAC6-204ENST00000376643 HSPG2P98160 4391 aa10.07□□□□□ -0.8
HDAC6-204ENST00000376643 LRP1BQ9NZR2 4599 aa10.06□□□□□ -0.8
HDAC6-204ENST00000376643 K7EQM0 130 aa10.06□□□□□ -0.8
HDAC6-204ENST00000376643 DNAH10OSP0CZ25 163 aa10.06□□□□□ -0.8
HDAC6-204ENST00000376643 HYLS1Q96M11 299 aa10.06□□□□□ -0.8
HDAC6-204ENST00000376643 MARVELD1Q9BSK0 173 aa10.06□□□□□ -0.8
HDAC6-204ENST00000376643 MDFICQ9P1T7 246 aa10.06□□□□□ -0.8
HDAC6-204ENST00000376643 MBD2Q9UBB5 411 aa10.06□□□□□ -0.8
HDAC6-204ENST00000376643 PGPA6NDG6 321 aa10.05□□□□□ -0.8
HDAC6-204ENST00000376643 EPM2AB3EWF7 344 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms