RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 PDZD11Q5EBL8 140 aa13.31□□□□□ -0.28
CTTN-203ENST00000376561 Q6AWC8 147 aa13.31□□□□□ -0.28
CTTN-203ENST00000376561 APCSP02743 223 aa13.3□□□□□ -0.28
CTTN-203ENST00000376561 TFPI2P48307 235 aa13.3□□□□□ -0.28
CTTN-203ENST00000376561 SRSF2Q01130 221 aaKnown RBP13.3□□□□□ -0.28
CTTN-203ENST00000376561 KIAA1644Q3SXP7 199 aa13.3□□□□□ -0.28
CTTN-203ENST00000376561 OR9G4Q8NGQ1 327 aa13.3□□□□□ -0.28
CTTN-203ENST00000376561 PEMTQ9UBM1 199 aa13.3□□□□□ -0.28
CTTN-203ENST00000376561 GRIFINA4D1Z8 144 aa13.29□□□□□ -0.28
CTTN-203ENST00000376561 INAFM1C9JVW0 142 aa13.29□□□□□ -0.28
CTTN-203ENST00000376561 HIST1H1AQ02539 215 aaPredicted RBP13.29□□□□□ -0.28
CTTN-203ENST00000376561 DLX4Q92988 240 aaPredicted RBP13.29□□□□□ -0.28
CTTN-203ENST00000376561 A0A1B0GUT8 65 aa13.29□□□□□ -0.28
CTTN-203ENST00000376561 K7EQG2 157 aa13.29□□□□□ -0.28
CTTN-203ENST00000376561 HAX1O00165 279 aa13.29□□□□□ -0.28
CTTN-203ENST00000376561 ORM1P02763 201 aa13.29□□□□□ -0.28
CTTN-203ENST00000376561 RPS20P60866 119 aaKnown RBP13.29□□□□□ -0.28
CTTN-203ENST00000376561 ZNF575Q86XF7 245 aa13.29□□□□□ -0.28
CTTN-203ENST00000376561 SSBP4Q9BWG4 385 aaPredicted RBP13.29□□□□□ -0.28
CTTN-203ENST00000376561 NDUFA7O95182 113 aa13.28□□□□□ -0.28
CTTN-203ENST00000376561 ARMS2P0C7Q2 107 aa13.28□□□□□ -0.28
CTTN-203ENST00000376561 CRISP2P16562 243 aa13.28□□□□□ -0.28
CTTN-203ENST00000376561 TPPP3Q9BW30 176 aa13.28□□□□□ -0.28
CTTN-203ENST00000376561 LINC01559Q495D7 138 aa13.28□□□□□ -0.28
CTTN-203ENST00000376561 RAX2Q96IS3 184 aa13.28□□□□□ -0.28
CTTN-203ENST00000376561 CITED2Q99967 270 aaPredicted RBP13.28□□□□□ -0.28
CTTN-203ENST00000376561 A0A1B0GUS0 222 aa13.27□□□□□ -0.28
CTTN-203ENST00000376561 A0A1W2PRX2 142 aa13.27□□□□□ -0.28
CTTN-203ENST00000376561 S100A8P05109 93 aa13.27□□□□□ -0.28
CTTN-203ENST00000376561 ZNF688P0C7X2 276 aa13.27□□□□□ -0.28
CTTN-203ENST00000376561 FOSL1P15407 271 aa13.27□□□□□ -0.28
CTTN-203ENST00000376561 S100A2P29034 98 aa13.27□□□□□ -0.28
CTTN-203ENST00000376561 SNRPD3P62318 126 aaKnown RBP13.27□□□□□ -0.29
CTTN-203ENST00000376561 PRR9Q5T870 116 aa13.27□□□□□ -0.29
CTTN-203ENST00000376561 ZFAND2AQ8N6M9 145 aa13.27□□□□□ -0.29
CTTN-203ENST00000376561 FAM19A4Q96LR4 140 aa13.27□□□□□ -0.29
CTTN-203ENST00000376561 TSSC4Q9Y5U2 329 aaPredicted RBP13.27□□□□□ -0.29
CTTN-203ENST00000376561 RIGQ13278 110 aa13.26□□□□□ -0.29
CTTN-203ENST00000376561 FHL3Q13643 280 aa13.26□□□□□ -0.29
CTTN-203ENST00000376561 PSMG4Q5JS54 123 aa13.26□□□□□ -0.29
CTTN-203ENST00000376561 LYZL1Q6UWQ5 148 aa13.26□□□□□ -0.29
CTTN-203ENST00000376561 C11orf21Q9P2W6 132 aa13.26□□□□□ -0.29
CTTN-203ENST00000376561 RNF114Q9Y508 228 aa13.26□□□□□ -0.29
CTTN-203ENST00000376561 IGKV3D-20A0A0C4DH25 116 aa13.25□□□□□ -0.29
CTTN-203ENST00000376561 CSN3P07498 182 aa13.25□□□□□ -0.29
CTTN-203ENST00000376561 SRIP30626 198 aa13.25□□□□□ -0.29
CTTN-203ENST00000376561 PAFAH1B2P68402 229 aa13.25□□□□□ -0.29
CTTN-203ENST00000376561 BORCS7Q96B45 105 aa13.25□□□□□ -0.29
CTTN-203ENST00000376561 TP53TG3Q9ULZ0 132 aa13.25□□□□□ -0.29
CTTN-203ENST00000376561 IGLC6P0CF74 106 aa13.25□□□□□ -0.29
CTTN-203ENST00000376561 Q0VG73 95 aa13.25□□□□□ -0.29
CTTN-203ENST00000376561 PRR31Q5SQ13 230 aa13.25□□□□□ -0.29
CTTN-203ENST00000376561 LINC00518Q8N0U6 118 aa13.25□□□□□ -0.29
CTTN-203ENST00000376561 TMEM256Q8N2U0 113 aa13.25□□□□□ -0.29
CTTN-203ENST00000376561 FER1L6-AS1Q8NA97 138 aa13.25□□□□□ -0.29
CTTN-203ENST00000376561 TRBV7-9A0A0J9YWB2 115 aa13.24□□□□□ -0.29
CTTN-203ENST00000376561 J3KRW8 73 aa13.24□□□□□ -0.29
CTTN-203ENST00000376561 CCL24O00175 119 aa13.24□□□□□ -0.29
CTTN-203ENST00000376561 FABP4P15090 132 aa13.24□□□□□ -0.29
CTTN-203ENST00000376561 Q6ZQT7 251 aa13.24□□□□□ -0.29
CTTN-203ENST00000376561 HIST1H2BLQ99880 126 aa13.24□□□□□ -0.29
CTTN-203ENST00000376561 A0A1B0GW15 77 aa13.24□□□□□ -0.29
CTTN-203ENST00000376561 CTRLP40313 264 aa13.24□□□□□ -0.29
CTTN-203ENST00000376561 PROK1P58294 105 aa13.24□□□□□ -0.29
CTTN-203ENST00000376561 SETD2Q9BYW2 2564 aaPredicted RBP13.23□□□□□ -0.29
CTTN-203ENST00000376561 F2Z2F3 143 aa13.23□□□□□ -0.29
CTTN-203ENST00000376561 TCF21O43680 179 aa13.23□□□□□ -0.29
CTTN-203ENST00000376561 GPX1P07203 203 aa13.23□□□□□ -0.29
CTTN-203ENST00000376561 CD33P20138 364 aa13.23□□□□□ -0.29
CTTN-203ENST00000376561 OR10J3Q5JRS4 329 aa13.23□□□□□ -0.29
CTTN-203ENST00000376561 APRG1Q8IVJ8 170 aa13.23□□□□□ -0.29
CTTN-203ENST00000376561 GATD1Q8NB37 220 aa13.23□□□□□ -0.29
CTTN-203ENST00000376561 HIVEP1P15822 2718 aa13.22□□□□□ -0.29
CTTN-203ENST00000376561 NUPR1O60356 82 aa13.22□□□□□ -0.29
CTTN-203ENST00000376561 BAGE3Q86Y29 109 aa13.22□□□□□ -0.29
CTTN-203ENST00000376561 NSD1Q96L73 2696 aaPredicted RBP13.22□□□□□ -0.29
CTTN-203ENST00000376561 A0A0J9YX75 114 aa13.21□□□□□ -0.29
CTTN-203ENST00000376561 AMBPP02760 352 aa13.21□□□□□ -0.29
CTTN-203ENST00000376561 LINC00310P59036 64 aa13.21□□□□□ -0.29
CTTN-203ENST00000376561 TMEM61Q8N0U2 210 aa13.21□□□□□ -0.29
CTTN-203ENST00000376561 OR10D4PQ8NGN7 298 aa13.21□□□□□ -0.29
CTTN-203ENST00000376561 DYNLRB2Q8TF09 96 aa13.21□□□□□ -0.29
CTTN-203ENST00000376561 TRAV21A0A0B4J279 112 aa13.21□□□□□ -0.29
CTTN-203ENST00000376561 MUC21A0A0G2JKD1 596 aa13.21□□□□□ -0.29
CTTN-203ENST00000376561 MUC21A0A140T8X8 626 aa13.21□□□□□ -0.29
CTTN-203ENST00000376561 SSTP61278 116 aa13.21□□□□□ -0.29
CTTN-203ENST00000376561 KIR3DS1Q14943 382 aa13.21□□□□□ -0.29
CTTN-203ENST00000376561 MUC21Q5SSG8 566 aa13.21□□□□□ -0.29
CTTN-203ENST00000376561 ALKBH7Q9BT30 221 aaPredicted RBP13.21□□□□□ -0.29
CTTN-203ENST00000376561 SERF1AO75920 110 aa13.2□□□□□ -0.3
CTTN-203ENST00000376561 SETXQ7Z333 2677 aaKnown RBP13.2□□□□□ -0.3
CTTN-203ENST00000376561 TRAV2A0A0B4J234 112 aa13.2□□□□□ -0.3
CTTN-203ENST00000376561 RNASE4P34096 147 aaKnown RBP13.2□□□□□ -0.3
CTTN-203ENST00000376561 DEFB114Q30KQ6 69 aa13.2□□□□□ -0.3
CTTN-203ENST00000376561 EBLN2Q6P2I7 272 aa13.2□□□□□ -0.3
CTTN-203ENST00000376561 C18orf32Q8TCD1 76 aa13.2□□□□□ -0.3
CTTN-203ENST00000376561 PACRGQ96M98 296 aaPredicted RBP13.2□□□□□ -0.3
CTTN-203ENST00000376561 CNFNQ9BYD5 112 aa13.2□□□□□ -0.3
CTTN-203ENST00000376561 FN1P02751 2386 aaKnown RBP13.19□□□□□ -0.3
CTTN-203ENST00000376561 LOC102724200A0A096LPH7 203 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms