RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 UBE2L3P68036 154 aaKnown RBP9.3□□□□□ -0.92
CLCN6-205ENST00000376492 AMTNQ6UX39 209 aa9.3□□□□□ -0.92
CLCN6-205ENST00000376492 CCDC28AQ8IWP9 274 aa9.3□□□□□ -0.92
CLCN6-205ENST00000376492 ZNF738Q8NE65 137 aa9.3□□□□□ -0.92
CLCN6-205ENST00000376492 PCNPQ8WW12 178 aaKnown RBP9.3□□□□□ -0.92
CLCN6-205ENST00000376492 SLC35B3Q9H1N7 401 aa9.3□□□□□ -0.92
CLCN6-205ENST00000376492 ZNF586Q9NXT0 402 aa9.3□□□□□ -0.92
CLCN6-205ENST00000376492 GNG13Q9P2W3 67 aa9.3□□□□□ -0.92
CLCN6-205ENST00000376492 TRBV19A0A075B6N1 114 aa9.29□□□□□ -0.92
CLCN6-205ENST00000376492 SERTM2A0A1B0GWG4 89 aa9.29□□□□□ -0.92
CLCN6-205ENST00000376492 SNRPCP09234 159 aaKnown RBP9.29□□□□□ -0.92
CLCN6-205ENST00000376492 FAM74A3Q4VXF1 159 aa9.29□□□□□ -0.92
CLCN6-205ENST00000376492 FAM222AQ5U5X8 452 aa9.29□□□□□ -0.92
CLCN6-205ENST00000376492 OR8A1Q8NGG7 326 aa9.29□□□□□ -0.92
CLCN6-205ENST00000376492 HIST1H2BAQ96A08 127 aa9.29□□□□□ -0.92
CLCN6-205ENST00000376492 FAM210BQ96KR6 192 aa9.29□□□□□ -0.92
CLCN6-205ENST00000376492 NEU1Q99519 415 aa9.29□□□□□ -0.92
CLCN6-205ENST00000376492 DKK2Q9UBU2 259 aa9.29□□□□□ -0.92
CLCN6-205ENST00000376492 TMEM218A2RU14 115 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 FBLL1A6NHQ2 334 aaKnown RBP9.28□□□□□ -0.92
CLCN6-205ENST00000376492 H3BTX0 84 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 SLC17A3O00476 420 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 ICAM4Q14773 271 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 RNF212Q495C1 297 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 TOR2AQ5JU69 321 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 C10orf91Q5T1B1 145 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 TMEM88Q6PEY1 159 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 RXFP4Q8TDU9 374 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 C11orf52Q96A22 123 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 MRPL53Q96EL3 112 aaKnown RBP9.28□□□□□ -0.92
CLCN6-205ENST00000376492 NIPSNAP3BQ9BS92 247 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 SEC11CQ9BY50 192 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 TMPRSS5Q9H3S3 457 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 OTORQ9NRC9 128 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 PRELID1Q9Y255 219 aa9.28□□□□□ -0.92
CLCN6-205ENST00000376492 TMEM189A5PLL7 270 aa9.27□□□□□ -0.93
CLCN6-205ENST00000376492 SMIM9A6NGZ8 99 aa9.27□□□□□ -0.93
CLCN6-205ENST00000376492 HMGB3O15347 200 aaKnown RBP9.27□□□□□ -0.93
CLCN6-205ENST00000376492 PAGE4O60829 102 aa9.27□□□□□ -0.93
CLCN6-205ENST00000376492 S100A9P06702 114 aaKnown RBP9.27□□□□□ -0.93
CLCN6-205ENST00000376492 SLC7A5P1Q8MH63 180 aa9.27□□□□□ -0.93
CLCN6-205ENST00000376492 DNAH5Q8TE73 4624 aa9.27□□□□□ -0.93
CLCN6-205ENST00000376492 NDUFB4O95168 129 aa9.26□□□□□ -0.93
CLCN6-205ENST00000376492 SRP19P09132 144 aaKnown RBP9.26□□□□□ -0.93
CLCN6-205ENST00000376492 PYYP10082 97 aa9.26□□□□□ -0.93
CLCN6-205ENST00000376492 HIST1H1AQ02539 215 aaPredicted RBP9.26□□□□□ -0.93
CLCN6-205ENST00000376492 C1orf158Q8N1D5 194 aa9.26□□□□□ -0.93
CLCN6-205ENST00000376492 C5orf17Q8NAS9 161 aa9.26□□□□□ -0.93
CLCN6-205ENST00000376492 IGF2BP2-AS1Q96M15 143 aa9.26□□□□□ -0.93
CLCN6-205ENST00000376492 AAMDCQ9H7C9 122 aa9.26□□□□□ -0.93
CLCN6-205ENST00000376492 TREM1Q9NP99 234 aa9.26□□□□□ -0.93
CLCN6-205ENST00000376492 NACAE9PAV3 2078 aa9.25□□□□□ -0.93
CLCN6-205ENST00000376492 PRAC2D3DTV9 90 aa9.25□□□□□ -0.93
CLCN6-205ENST00000376492 CRXO43186 299 aaPredicted RBP9.25□□□□□ -0.93
CLCN6-205ENST00000376492 OR10J4P0C629 311 aa9.25□□□□□ -0.93
CLCN6-205ENST00000376492 IQCF2Q8IXL9 164 aa9.25□□□□□ -0.93
CLCN6-205ENST00000376492 Q8N1X5 172 aa9.25□□□□□ -0.93
CLCN6-205ENST00000376492 SMIM12Q96EX1 92 aa9.25□□□□□ -0.93
CLCN6-205ENST00000376492 CARHSP1Q9Y2V2 147 aaKnown RBP9.25□□□□□ -0.93
CLCN6-205ENST00000376492 GOLT1BQ9Y3E0 138 aa9.25□□□□□ -0.93
CLCN6-205ENST00000376492 YTHDF2Q9Y5A9 579 aaKnown RBP9.25□□□□□ -0.93
CLCN6-205ENST00000376492 TRBV6-1A0A0K0K1D8 114 aa9.24□□□□□ -0.93
CLCN6-205ENST00000376492 TEX48A0A1B0GUV7 120 aa9.24□□□□□ -0.93
CLCN6-205ENST00000376492 A0A1B0GV50 99 aa9.24□□□□□ -0.93
CLCN6-205ENST00000376492 M0R2Z0 102 aa9.24□□□□□ -0.93
CLCN6-205ENST00000376492 TAS2R60P59551 318 aa9.24□□□□□ -0.93
CLCN6-205ENST00000376492 SUMO1P63165 101 aaKnown RBP9.24□□□□□ -0.93
CLCN6-205ENST00000376492 SPINK13Q1W4C9 94 aa9.24□□□□□ -0.93
CLCN6-205ENST00000376492 CST9LP1Q5W188 147 aa9.24□□□□□ -0.93
CLCN6-205ENST00000376492 OR10J6PQ8NGY7 276 aa9.24□□□□□ -0.93
CLCN6-205ENST00000376492 KLF12Q9Y4X4 402 aa9.24□□□□□ -0.93
CLCN6-205ENST00000376492 LY96Q9Y6Y9 160 aa9.24□□□□□ -0.93
CLCN6-205ENST00000376492 RBAKDNA6NC62 111 aa9.23□□□□□ -0.93
CLCN6-205ENST00000376492 GGTLC3B5MD39 225 aa9.23□□□□□ -0.93
CLCN6-205ENST00000376492 K7EQM0 130 aa9.23□□□□□ -0.93
CLCN6-205ENST00000376492 ATP6V1G1O75348 118 aa9.23□□□□□ -0.93
CLCN6-205ENST00000376492 SFTA3P0C7M3 94 aa9.23□□□□□ -0.93
CLCN6-205ENST00000376492 RANP62826 216 aaKnown RBP9.23□□□□□ -0.93
CLCN6-205ENST00000376492 SRSF3P84103 164 aaKnown RBP9.23□□□□□ -0.93
CLCN6-205ENST00000376492 PNRC1Q12796 327 aaPredicted RBP9.23□□□□□ -0.93
CLCN6-205ENST00000376492 BLNKQ8WV28 456 aa9.23□□□□□ -0.93
CLCN6-205ENST00000376492 ATG101Q9BSB4 218 aa9.23□□□□□ -0.93
CLCN6-205ENST00000376492 Q9H3A6 140 aa9.23□□□□□ -0.93
CLCN6-205ENST00000376492 SCRT2Q9NQ03 307 aa9.23□□□□□ -0.93
CLCN6-205ENST00000376492 PPP1R14DQ9NXH3 145 aa9.23□□□□□ -0.93
CLCN6-205ENST00000376492 EPDR1Q9UM22 224 aa9.23□□□□□ -0.93
CLCN6-205ENST00000376492 NBDYA0A0U1RRE5 68 aa9.22□□□□□ -0.93
CLCN6-205ENST00000376492 PGPA6NDG6 321 aa9.22□□□□□ -0.93
CLCN6-205ENST00000376492 C9JCJ5 164 aa9.22□□□□□ -0.93
CLCN6-205ENST00000376492 NPIPB6E9PJ23 425 aa9.22□□□□□ -0.93
CLCN6-205ENST00000376492 M0R3E3 92 aa9.22□□□□□ -0.93
CLCN6-205ENST00000376492 INSP01308 110 aa9.22□□□□□ -0.93
CLCN6-205ENST00000376492 SLC25A5P05141 298 aaKnown RBP9.22□□□□□ -0.93
CLCN6-205ENST00000376492 PRB4P10163 310 aaPredicted RBP9.22□□□□□ -0.93
CLCN6-205ENST00000376492 CDKN1BP46527 198 aa9.22□□□□□ -0.93
CLCN6-205ENST00000376492 CSN1S1P47710 185 aa9.22□□□□□ -0.93
CLCN6-205ENST00000376492 DAD1P61803 113 aa9.22□□□□□ -0.93
CLCN6-205ENST00000376492 EXOC3-AS1Q8N2X6 119 aa9.22□□□□□ -0.93
CLCN6-205ENST00000376492 C6orf223Q8N319 242 aa9.22□□□□□ -0.93
CLCN6-205ENST00000376492 CMTM2Q8TAZ6 248 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms