RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 IGHV1-3A0A0C4DH29 117 aa14.01□□□□□ -0.17
TUBGCP3-202ENST00000375669 MORN3Q6PF18 240 aaPredicted RBP14.01□□□□□ -0.17
TUBGCP3-202ENST00000375669 TMEM158Q8WZ71 300 aa14.01□□□□□ -0.17
TUBGCP3-202ENST00000375669 RNF185Q96GF1 192 aa14.01□□□□□ -0.17
TUBGCP3-202ENST00000375669 MRPL35Q9NZE8 188 aaKnown RBP14.01□□□□□ -0.17
TUBGCP3-202ENST00000375669 DLX6P56179 175 aa14.01□□□□□ -0.17
TUBGCP3-202ENST00000375669 TMEM155Q4W5P6 130 aa14□□□□□ -0.17
TUBGCP3-202ENST00000375669 DEFB123Q8N688 67 aa14□□□□□ -0.17
TUBGCP3-202ENST00000375669 PGPEP1Q9NXJ5 209 aa14□□□□□ -0.17
TUBGCP3-202ENST00000375669 COL12A1Q99715 3063 aa14□□□□□ -0.17
TUBGCP3-202ENST00000375669 SHANK2-AS3Q9BTD1 123 aa14□□□□□ -0.17
TUBGCP3-202ENST00000375669 A6NJY4 79 aa13.99□□□□□ -0.17
TUBGCP3-202ENST00000375669 HOXA3O43365 443 aaPredicted RBP13.99□□□□□ -0.17
TUBGCP3-202ENST00000375669 TNFRSF6BO95407 300 aa13.99□□□□□ -0.17
TUBGCP3-202ENST00000375669 GATA1P15976 413 aaPredicted RBP13.99□□□□□ -0.17
TUBGCP3-202ENST00000375669 ZNF491Q8N8L2 437 aa13.99□□□□□ -0.17
TUBGCP3-202ENST00000375669 DLX4Q92988 240 aaPredicted RBP13.99□□□□□ -0.17
TUBGCP3-202ENST00000375669 ANAPC13Q9BS18 74 aa13.99□□□□□ -0.17
TUBGCP3-202ENST00000375669 K7EIM0 57 aa13.99□□□□□ -0.17
TUBGCP3-202ENST00000375669 ZNF80P51504 273 aaPredicted RBP13.99□□□□□ -0.17
TUBGCP3-202ENST00000375669 RNF125Q96EQ8 232 aa13.99□□□□□ -0.17
TUBGCP3-202ENST00000375669 DYNLRB1Q9NP97 96 aa13.99□□□□□ -0.17
TUBGCP3-202ENST00000375669 CRYGBP07316 175 aa13.99□□□□□ -0.17
TUBGCP3-202ENST00000375669 EGR2P11161 476 aaPredicted RBP13.99□□□□□ -0.17
TUBGCP3-202ENST00000375669 CUL9Q8IWT3 2517 aa13.98□□□□□ -0.17
TUBGCP3-202ENST00000375669 SPTBN1Q01082 2364 aaKnown RBP13.98□□□□□ -0.17
TUBGCP3-202ENST00000375669 NCBP2LA6PVI3 153 aaKnown RBP13.98□□□□□ -0.17
TUBGCP3-202ENST00000375669 GAGE5Q13069 117 aa13.98□□□□□ -0.17
TUBGCP3-202ENST00000375669 GAGE6Q13070 117 aa13.98□□□□□ -0.17
TUBGCP3-202ENST00000375669 LINC00311Q8N616 119 aa13.98□□□□□ -0.17
TUBGCP3-202ENST00000375669 RPEQ96AT9 228 aa13.98□□□□□ -0.17
TUBGCP3-202ENST00000375669 LINC01619G3V211 115 aa13.97□□□□□ -0.17
TUBGCP3-202ENST00000375669 H3BRN7 92 aa13.97□□□□□ -0.17
TUBGCP3-202ENST00000375669 LY6HO94772 140 aa13.97□□□□□ -0.17
TUBGCP3-202ENST00000375669 IGLC6P0CF74 106 aa13.97□□□□□ -0.17
TUBGCP3-202ENST00000375669 A0A0G2JNJ9 132 aa13.97□□□□□ -0.17
TUBGCP3-202ENST00000375669 BUB1B-PAK6H3BSN5 160 aa13.97□□□□□ -0.17
TUBGCP3-202ENST00000375669 Q9UFV3 132 aa13.97□□□□□ -0.17
TUBGCP3-202ENST00000375669 VPS13CQ709C8 3753 aa13.96□□□□□ -0.17
TUBGCP3-202ENST00000375669 PPDPFLQ8WWR9 84 aa13.96□□□□□ -0.18
TUBGCP3-202ENST00000375669 RNASE6Q93091 150 aaKnown RBP13.96□□□□□ -0.18
TUBGCP3-202ENST00000375669 CARD19Q96LW7 228 aa13.96□□□□□ -0.18
TUBGCP3-202ENST00000375669 RALYQ9UKM9 306 aaKnown RBP13.96□□□□□ -0.18
TUBGCP3-202ENST00000375669 AKAP6Q13023 2319 aa13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 PRSS29PA6NIE9 313 aa13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 MYOZ3Q8TDC0 251 aa13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 PTH2Q96A98 100 aa13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 MAP1AP78559 2803 aaPredicted RBP13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 A0A087WX48 190 aa13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 TNFRSF13BO14836 293 aaPredicted RBP13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 TIMM23O14925 209 aa13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 MRPS12O15235 138 aaKnown RBP13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 CEACAM4O75871 244 aa13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 PSMB2P49721 201 aa13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 Q8N8P6 123 aa13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 NUP37Q8NFH4 326 aa13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 AAMDCQ9H7C9 122 aa13.95□□□□□ -0.18
TUBGCP3-202ENST00000375669 TLN1Q9Y490 2541 aaKnown RBP13.94□□□□□ -0.18
TUBGCP3-202ENST00000375669 NDUFA3O95167 84 aa13.94□□□□□ -0.18
TUBGCP3-202ENST00000375669 IGLV1-47P01700 117 aa13.94□□□□□ -0.18
TUBGCP3-202ENST00000375669 ORM1P02763 201 aa13.94□□□□□ -0.18
TUBGCP3-202ENST00000375669 CEP295Q9C0D2 2601 aa13.94□□□□□ -0.18
TUBGCP3-202ENST00000375669 PTPRZ1P23471 2315 aaPredicted RBP13.94□□□□□ -0.18
TUBGCP3-202ENST00000375669 COX8CQ7Z4L0 72 aa13.94□□□□□ -0.18
TUBGCP3-202ENST00000375669 IGHV3OR16-13A0A075B7E8 117 aa13.93□□□□□ -0.18
TUBGCP3-202ENST00000375669 IGHV3-74A0A0B4J1X5 117 aa13.93□□□□□ -0.18
TUBGCP3-202ENST00000375669 MYMXA0A1B0GTQ4 84 aa13.93□□□□□ -0.18
TUBGCP3-202ENST00000375669 HES1Q14469 280 aa13.93□□□□□ -0.18
TUBGCP3-202ENST00000375669 VCX2Q9H322 139 aa13.93□□□□□ -0.18
TUBGCP3-202ENST00000375669 PLNP26678 52 aa13.93□□□□□ -0.18
TUBGCP3-202ENST00000375669 ERCC8Q13216 396 aa13.93□□□□□ -0.18
TUBGCP3-202ENST00000375669 ZFAND6Q6FIF0 208 aa13.93□□□□□ -0.18
TUBGCP3-202ENST00000375669 PRR25Q96S07 402 aa13.93□□□□□ -0.18
TUBGCP3-202ENST00000375669 ONECUT1Q9UBC0 465 aa13.93□□□□□ -0.18
TUBGCP3-202ENST00000375669 IGLV2-18A0A075B6J9 118 aa13.92□□□□□ -0.18
TUBGCP3-202ENST00000375669 IGHV3-66A0A0C4DH42 116 aa13.92□□□□□ -0.18
TUBGCP3-202ENST00000375669 GFRALQ6UXV0 394 aa13.92□□□□□ -0.18
TUBGCP3-202ENST00000375669 TEN1Q86WV5 123 aa13.92□□□□□ -0.18
TUBGCP3-202ENST00000375669 ZNF575Q86XF7 245 aa13.92□□□□□ -0.18
TUBGCP3-202ENST00000375669 UFC1Q9Y3C8 167 aa13.92□□□□□ -0.18
TUBGCP3-202ENST00000375669 LOC107984156A0A0G2JMH3 177 aa13.92□□□□□ -0.18
TUBGCP3-202ENST00000375669 B5MCH6 92 aa13.92□□□□□ -0.18
TUBGCP3-202ENST00000375669 ARL17AQ8IVW1 177 aa13.92□□□□□ -0.18
TUBGCP3-202ENST00000375669 LINC01549A6NIU2 74 aa13.92□□□□□ -0.18
TUBGCP3-202ENST00000375669 ZFP2Q6ZN57 461 aa13.92□□□□□ -0.18
TUBGCP3-202ENST00000375669 CNFNQ9BYD5 112 aa13.91□□□□□ -0.18
TUBGCP3-202ENST00000375669 LINC01548A6NM66 108 aa13.91□□□□□ -0.18
TUBGCP3-202ENST00000375669 E7EQL1 145 aa13.91□□□□□ -0.18
TUBGCP3-202ENST00000375669 PDE6HQ13956 83 aa13.91□□□□□ -0.18
TUBGCP3-202ENST00000375669 SFTA2Q6UW10 78 aa13.91□□□□□ -0.18
TUBGCP3-202ENST00000375669 Q6ZQT7 251 aa13.91□□□□□ -0.18
TUBGCP3-202ENST00000375669 TEX29Q8N6K0 151 aa13.91□□□□□ -0.18
TUBGCP3-202ENST00000375669 TRAV26-2A0A0B4J265 109 aa13.9□□□□□ -0.18
TUBGCP3-202ENST00000375669 ZNF292O60281 2723 aa13.9□□□□□ -0.18
TUBGCP3-202ENST00000375669 CUBNO60494 3623 aa13.9□□□□□ -0.18
TUBGCP3-202ENST00000375669 LAGE3Q14657 143 aa13.9□□□□□ -0.18
TUBGCP3-202ENST00000375669 RNF182Q8N6D2 247 aa13.9□□□□□ -0.18
TUBGCP3-202ENST00000375669 SPRY2O43597 315 aa13.89□□□□□ -0.19
TUBGCP3-202ENST00000375669 ZNF688P0C7X2 276 aa13.89□□□□□ -0.19
TUBGCP3-202ENST00000375669 C8orf31Q8N9H6 132 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms