RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 SFRP2Q96HF1 295 aa12.7□□□□□ -0.38
HLA-DMA-201ENST00000374843 WFDC10AQ9H1F0 79 aa12.7□□□□□ -0.38
HLA-DMA-201ENST00000374843 OSTCQ9NRP0 149 aa12.7□□□□□ -0.38
HLA-DMA-201ENST00000374843 C7orf77A4D0Y5 90 aa12.69□□□□□ -0.38
HLA-DMA-201ENST00000374843 TSPOP30536 169 aa12.69□□□□□ -0.38
HLA-DMA-201ENST00000374843 CRIP1P50238 77 aa12.69□□□□□ -0.38
HLA-DMA-201ENST00000374843 ZNF80P51504 273 aaPredicted RBP12.69□□□□□ -0.38
HLA-DMA-201ENST00000374843 FAM162BQ5T6X4 162 aa12.69□□□□□ -0.38
HLA-DMA-201ENST00000374843 ATRAIDQ6UW56 229 aa12.69□□□□□ -0.38
HLA-DMA-201ENST00000374843 LINC00322Q6ZN03 302 aaPredicted RBP12.69□□□□□ -0.38
HLA-DMA-201ENST00000374843 STHQ8IWL8 128 aa12.69□□□□□ -0.38
HLA-DMA-201ENST00000374843 Q8N1Y9 231 aa12.69□□□□□ -0.38
HLA-DMA-201ENST00000374843 OR4B1Q8NGF8 309 aa12.69□□□□□ -0.38
HLA-DMA-201ENST00000374843 RNF212Q495C1 297 aa12.68□□□□□ -0.38
HLA-DMA-201ENST00000374843 Q6AWC8 147 aa12.68□□□□□ -0.38
HLA-DMA-201ENST00000374843 PRR27Q6MZM9 219 aa12.68□□□□□ -0.38
HLA-DMA-201ENST00000374843 CTDSP1Q9GZU7 261 aa12.68□□□□□ -0.38
HLA-DMA-201ENST00000374843 SORL1Q92673 2214 aa12.68□□□□□ -0.38
HLA-DMA-201ENST00000374843 PPP1R2P9O14990 202 aa12.67□□□□□ -0.38
HLA-DMA-201ENST00000374843 SH2D1AO60880 128 aa12.67□□□□□ -0.38
HLA-DMA-201ENST00000374843 IGKV3-20P01619 116 aa12.67□□□□□ -0.38
HLA-DMA-201ENST00000374843 MT-ND4LP03901 98 aa12.67□□□□□ -0.38
HLA-DMA-201ENST00000374843 PFN1P07737 140 aaKnown RBP12.67□□□□□ -0.38
HLA-DMA-201ENST00000374843 CDKN1BP46527 198 aa12.67□□□□□ -0.38
HLA-DMA-201ENST00000374843 KRTAP10-11P60412 298 aa12.67□□□□□ -0.38
HLA-DMA-201ENST00000374843 ERVFC1-1P60608 527 aa12.67□□□□□ -0.38
HLA-DMA-201ENST00000374843 IBA57Q5T440 356 aaKnown RBP12.67□□□□□ -0.38
HLA-DMA-201ENST00000374843 ANAPC16Q96DE5 110 aa12.67□□□□□ -0.38
HLA-DMA-201ENST00000374843 RNASE7Q9H1E1 156 aaKnown RBP12.67□□□□□ -0.38
HLA-DMA-201ENST00000374843 TMEM242Q9NWH2 141 aa12.67□□□□□ -0.38
HLA-DMA-201ENST00000374843 AMBPP02760 352 aa12.66□□□□□ -0.38
HLA-DMA-201ENST00000374843 CT83Q5H943 113 aa12.66□□□□□ -0.38
HLA-DMA-201ENST00000374843 C15orf54Q8N8G6 183 aa12.66□□□□□ -0.38
HLA-DMA-201ENST00000374843 OR10G8Q8NGN5 311 aa12.66□□□□□ -0.38
HLA-DMA-201ENST00000374843 V9GYV3 84 aa12.66□□□□□ -0.38
HLA-DMA-201ENST00000374843 C7orf71A4D174 169 aa12.65□□□□□ -0.38
HLA-DMA-201ENST00000374843 G3V4G9 280 aa12.65□□□□□ -0.38
HLA-DMA-201ENST00000374843 GPX1P07203 203 aa12.65□□□□□ -0.38
HLA-DMA-201ENST00000374843 BTN1A1Q13410 526 aa12.65□□□□□ -0.38
HLA-DMA-201ENST00000374843 SPINK13Q1W4C9 94 aa12.65□□□□□ -0.38
HLA-DMA-201ENST00000374843 GFI1BQ5VTD9 330 aa12.65□□□□□ -0.38
HLA-DMA-201ENST00000374843 DEFB125Q8N687 156 aa12.65□□□□□ -0.38
HLA-DMA-201ENST00000374843 NUDT10Q8NFP7 164 aa12.65□□□□□ -0.38
HLA-DMA-201ENST00000374843 NUDT11Q96G61 164 aa12.65□□□□□ -0.38
HLA-DMA-201ENST00000374843 RPS10P5Q9NQ39 176 aa12.65□□□□□ -0.38
HLA-DMA-201ENST00000374843 TRAV21A0A0B4J279 112 aa12.64□□□□□ -0.39
HLA-DMA-201ENST00000374843 FABP5P3A8MUU1 101 aa12.64□□□□□ -0.39
HLA-DMA-201ENST00000374843 H7BYZ3 331 aa12.64□□□□□ -0.39
HLA-DMA-201ENST00000374843 M0R2Z0 102 aa12.64□□□□□ -0.39
HLA-DMA-201ENST00000374843 CRXO43186 299 aaPredicted RBP12.64□□□□□ -0.39
HLA-DMA-201ENST00000374843 P01737 135 aa12.64□□□□□ -0.39
HLA-DMA-201ENST00000374843 KIR3DS1Q14943 382 aa12.64□□□□□ -0.39
HLA-DMA-201ENST00000374843 KPRPQ5T749 579 aaPredicted RBP12.64□□□□□ -0.39
HLA-DMA-201ENST00000374843 MORN3Q6PF18 240 aaPredicted RBP12.64□□□□□ -0.39
HLA-DMA-201ENST00000374843 RPP21Q9H633 154 aaKnown RBP12.64□□□□□ -0.39
HLA-DMA-201ENST00000374843 AGRNO00468 2067 aa12.63□□□□□ -0.39
HLA-DMA-201ENST00000374843 GATCO43716 136 aaKnown RBP12.63□□□□□ -0.39
HLA-DMA-201ENST00000374843 RNASE4P34096 147 aaKnown RBP12.63□□□□□ -0.39
HLA-DMA-201ENST00000374843 LINC01559Q495D7 138 aa12.63□□□□□ -0.39
HLA-DMA-201ENST00000374843 DAZAP1Q96EP5 407 aaKnown RBP12.63□□□□□ -0.39
HLA-DMA-201ENST00000374843 C20orf144Q9BQM9 153 aa12.63□□□□□ -0.39
HLA-DMA-201ENST00000374843 SRD5A3Q9H8P0 318 aa12.63□□□□□ -0.39
HLA-DMA-201ENST00000374843 NUTF2P61970 127 aaKnown RBP12.62□□□□□ -0.39
HLA-DMA-201ENST00000374843 C11orf21Q9P2W6 132 aa12.62□□□□□ -0.39
HLA-DMA-201ENST00000374843 CXorf65A6NEN9 183 aa12.61□□□□□ -0.39
HLA-DMA-201ENST00000374843 ZNF705GA8MUZ8 300 aaPredicted RBP12.61□□□□□ -0.39
HLA-DMA-201ENST00000374843 J3KRW8 73 aa12.61□□□□□ -0.39
HLA-DMA-201ENST00000374843 ZNF324O75467 553 aaPredicted RBP12.61□□□□□ -0.39
HLA-DMA-201ENST00000374843 INSP01308 110 aa12.61□□□□□ -0.39
HLA-DMA-201ENST00000374843 CXCL1P09341 107 aa12.61□□□□□ -0.39
HLA-DMA-201ENST00000374843 GIG44P09565 113 aaPredicted RBP12.61□□□□□ -0.39
HLA-DMA-201ENST00000374843 IMMP2LQ96T52 175 aa12.61□□□□□ -0.39
HLA-DMA-201ENST00000374843 TRAV12-2A0A075B6T6 113 aa12.6□□□□□ -0.39
HLA-DMA-201ENST00000374843 A8MZ25 164 aa12.6□□□□□ -0.39
HLA-DMA-201ENST00000374843 FXYD7P58549 80 aa12.6□□□□□ -0.39
HLA-DMA-201ENST00000374843 RPS20P60866 119 aaKnown RBP12.6□□□□□ -0.39
HLA-DMA-201ENST00000374843 Q6ZQT7 251 aa12.6□□□□□ -0.39
HLA-DMA-201ENST00000374843 OR2D3Q8NGH3 330 aa12.6□□□□□ -0.39
HLA-DMA-201ENST00000374843 TRAV12-3A0A0B4J271 114 aa12.59□□□□□ -0.39
HLA-DMA-201ENST00000374843 IGKV3D-20A0A0C4DH25 116 aa12.59□□□□□ -0.39
HLA-DMA-201ENST00000374843 RBMY1A1P0DJD3 496 aaKnown RBP12.59□□□□□ -0.39
HLA-DMA-201ENST00000374843 RBMY1CP0DJD4 496 aa12.59□□□□□ -0.39
HLA-DMA-201ENST00000374843 RPL35AP18077 110 aaKnown RBP12.59□□□□□ -0.39
HLA-DMA-201ENST00000374843 RBMY1FQ15415 496 aaKnown RBP12.59□□□□□ -0.39
HLA-DMA-201ENST00000374843 TDRG1Q3Y452 100 aa12.59□□□□□ -0.39
HLA-DMA-201ENST00000374843 TSKUQ8WUA8 353 aa12.59□□□□□ -0.39
HLA-DMA-201ENST00000374843 C1QTNF4Q9BXJ3 329 aa12.59□□□□□ -0.39
HLA-DMA-201ENST00000374843 GFRA4Q9GZZ7 299 aa12.59□□□□□ -0.39
HLA-DMA-201ENST00000374843 TUBA4BQ9H853 241 aa12.59□□□□□ -0.39
HLA-DMA-201ENST00000374843 SMCO4Q9NRQ5 59 aa12.59□□□□□ -0.39
HLA-DMA-201ENST00000374843 IL36BQ9NZH7 164 aa12.59□□□□□ -0.39
HLA-DMA-201ENST00000374843 LOC102724200A0A096LPH7 203 aaPredicted RBP12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 KIR2DL5BA0A0G2JN68 375 aa12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 KIR2DL5BA0A0G2JPC4 375 aa12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 SMIM27A0A1W2PRY6 76 aa12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 TMEM189A5PLL7 270 aa12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 FAM231BA6NCW3 169 aa12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 A8MWL6 223 aa12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 SCO1O75880 301 aa12.58□□□□□ -0.4
HLA-DMA-201ENST00000374843 CA1P00915 261 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms