RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 OR4B1Q8NGF8 309 aa11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 DAZAP1Q96EP5 407 aaKnown RBP11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 C11orf21Q9P2W6 132 aa11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 LENEPQ9Y5L5 61 aa11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 TRAV9-1A0A075B6T8 112 aa11.68□□□□□ -0.54
NIPAL3-204ENST00000374399 A0A0J9YX75 114 aa11.68□□□□□ -0.54
NIPAL3-204ENST00000374399 CD33P20138 364 aa11.68□□□□□ -0.54
NIPAL3-204ENST00000374399 KIR3DS1Q14943 382 aa11.68□□□□□ -0.54
NIPAL3-204ENST00000374399 APRG1Q8IVJ8 170 aa11.68□□□□□ -0.54
NIPAL3-204ENST00000374399 NUP35Q8NFH5 326 aa11.68□□□□□ -0.54
NIPAL3-204ENST00000374399 OR2D3Q8NGH3 330 aa11.68□□□□□ -0.54
NIPAL3-204ENST00000374399 NDFIP1Q9BT67 221 aa11.68□□□□□ -0.54
NIPAL3-204ENST00000374399 TRAV25A0A0B4J276 109 aa11.67□□□□□ -0.54
NIPAL3-204ENST00000374399 SRD5A3Q9H8P0 318 aa11.67□□□□□ -0.54
NIPAL3-204ENST00000374399 TRRAPQ9Y4A5 3859 aa11.67□□□□□ -0.54
NIPAL3-204ENST00000374399 HIGD1CA8MV81 97 aa11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 A8MWL6 223 aa11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 IGLV1-51P01701 117 aa11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 CRISP2P16562 243 aa11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 SPAG8Q99932 426 aaPredicted RBP11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 SAV1Q9H4B6 383 aaPredicted RBP11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 TRBV7-9A0A0J9YWB2 115 aa11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 SPINK4O60575 86 aa11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 TRGC2P03986 189 aa11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 FOXA3P55318 350 aaPredicted RBP11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 DEFB131AP59861 70 aa11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 ZNF124Q15973 351 aa11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 BTF3L4Q96K17 158 aa11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 GFRA4Q9GZZ7 299 aa11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 MAP6D1Q9H9H5 199 aa11.66□□□□□ -0.54
NIPAL3-204ENST00000374399 FABP5P3A8MUU1 101 aa11.65□□□□□ -0.54
NIPAL3-204ENST00000374399 SAP30O75446 220 aa11.65□□□□□ -0.54
NIPAL3-204ENST00000374399 FOXI2Q6ZQN5 318 aa11.65□□□□□ -0.54
NIPAL3-204ENST00000374399 NAT8BQ9UHF3 227 aa11.65□□□□□ -0.54
NIPAL3-204ENST00000374399 IGKV3D-20A0A0C4DH25 116 aa11.64□□□□□ -0.55
NIPAL3-204ENST00000374399 FAM231BA6NCW3 169 aa11.64□□□□□ -0.55
NIPAL3-204ENST00000374399 KLLNB2CW77 178 aa11.64□□□□□ -0.55
NIPAL3-204ENST00000374399 ODF3L2Q3SX64 289 aa11.64□□□□□ -0.55
NIPAL3-204ENST00000374399 AMTNQ6UX39 209 aa11.64□□□□□ -0.55
NIPAL3-204ENST00000374399 ZFP82Q8N141 532 aa11.64□□□□□ -0.55
NIPAL3-204ENST00000374399 TMEM189A5PLL7 270 aa11.63□□□□□ -0.55
NIPAL3-204ENST00000374399 KNCNA6PVL3 124 aa11.63□□□□□ -0.55
NIPAL3-204ENST00000374399 A8MTW9 85 aa11.63□□□□□ -0.55
NIPAL3-204ENST00000374399 LINC01559Q495D7 138 aa11.63□□□□□ -0.55
NIPAL3-204ENST00000374399 TMSB15BA0A087X1C1 80 aa11.63□□□□□ -0.55
NIPAL3-204ENST00000374399 J3KRW8 73 aa11.63□□□□□ -0.55
NIPAL3-204ENST00000374399 PF4P02776 101 aa11.63□□□□□ -0.55
NIPAL3-204ENST00000374399 ACTL10Q5JWF8 245 aa11.63□□□□□ -0.55
NIPAL3-204ENST00000374399 MRPL54Q6P161 138 aaKnown RBP11.63□□□□□ -0.55
NIPAL3-204ENST00000374399 ODF3Q96PU9 254 aa11.63□□□□□ -0.55
NIPAL3-204ENST00000374399 A0A1B0GXF2 115 aa11.62□□□□□ -0.55
NIPAL3-204ENST00000374399 RBMY1BA6NDE4 496 aaKnown RBP11.62□□□□□ -0.55
NIPAL3-204ENST00000374399 RBMY1EA6NEQ0 496 aaKnown RBP11.62□□□□□ -0.55
NIPAL3-204ENST00000374399 OR4C46A6NHA9 309 aa11.62□□□□□ -0.55
NIPAL3-204ENST00000374399 C1orf196B1AJZ1 125 aa11.62□□□□□ -0.55
NIPAL3-204ENST00000374399 RBMY1DP0C7P1 496 aaKnown RBP11.62□□□□□ -0.55
NIPAL3-204ENST00000374399 Q6AWC8 147 aa11.62□□□□□ -0.55
NIPAL3-204ENST00000374399 EBLN2Q6P2I7 272 aa11.62□□□□□ -0.55
NIPAL3-204ENST00000374399 FRZBQ92765 325 aa11.62□□□□□ -0.55
NIPAL3-204ENST00000374399 PGLYRP4Q96LB8 373 aa11.62□□□□□ -0.55
NIPAL3-204ENST00000374399 H3BMM0 161 aa11.61□□□□□ -0.55
NIPAL3-204ENST00000374399 IGKV3-20P01619 116 aa11.61□□□□□ -0.55
NIPAL3-204ENST00000374399 HLA-DRB4P13762 266 aa11.61□□□□□ -0.55
NIPAL3-204ENST00000374399 HLA-DRB4X5D2U9 266 aa11.61□□□□□ -0.55
NIPAL3-204ENST00000374399 CMYA5Q8N3K9 4069 aa11.61□□□□□ -0.55
NIPAL3-204ENST00000374399 ORM1P02763 201 aa11.6□□□□□ -0.55
NIPAL3-204ENST00000374399 GPX1P07203 203 aa11.6□□□□□ -0.55
NIPAL3-204ENST00000374399 IGLC6P0CF74 106 aa11.6□□□□□ -0.55
NIPAL3-204ENST00000374399 RNASE4P34096 147 aaKnown RBP11.6□□□□□ -0.55
NIPAL3-204ENST00000374399 TMEM136Q6ZRR5 245 aa11.6□□□□□ -0.55
NIPAL3-204ENST00000374399 DUSP14O95147 198 aaKnown RBP11.6□□□□□ -0.55
NIPAL3-204ENST00000374399 BEAN1Q3B7T3 259 aa11.6□□□□□ -0.55
NIPAL3-204ENST00000374399 OR2K2Q8NGT1 345 aa11.6□□□□□ -0.55
NIPAL3-204ENST00000374399 GRIFINA4D1Z8 144 aa11.59□□□□□ -0.55
NIPAL3-204ENST00000374399 FABP9Q0Z7S8 132 aa11.59□□□□□ -0.55
NIPAL3-204ENST00000374399 GNB1LQ9BYB4 327 aa11.59□□□□□ -0.55
NIPAL3-204ENST00000374399 C19orf73Q9NVV2 129 aa11.59□□□□□ -0.55
NIPAL3-204ENST00000374399 TRAV21A0A0B4J279 112 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 M0R2Z0 102 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 HIST1H2BKO60814 126 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 ZNF324O75467 553 aaPredicted RBP11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 HIST1H2BJP06899 126 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 ARMS2P0C7Q2 107 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 HIST1H2BOP23527 126 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 HIST1H2BBP33778 126 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 HIST1H2BDP58876 126 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 RPS20P60866 119 aaKnown RBP11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 RAB5BP61020 215 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 HIST1H2BCP62807 126 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 HIST2H2BEQ16778 126 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 GFI1BQ5VTD9 330 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 ATP5L2Q7Z4Y8 100 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 HIST1H2BHQ93079 126 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 HIST1H2BNQ99877 126 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 HIST1H2BMQ99879 126 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 TRAPPC1Q9Y5R8 145 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 STAB1Q9NY15 2570 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 NOTCH3Q9UM47 2321 aa11.58□□□□□ -0.56
NIPAL3-204ENST00000374399 TRAV12-2A0A075B6T6 113 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms