RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 K7EQM0 130 aa11.47□□□□□ -0.57
HDHD3-202ENST00000374180 ZFAND2AQ8N6M9 145 aa11.47□□□□□ -0.57
HDHD3-202ENST00000374180 NKX6-2Q9C056 277 aaPredicted RBP11.47□□□□□ -0.57
HDHD3-202ENST00000374180 LENEPQ9Y5L5 61 aa11.47□□□□□ -0.57
HDHD3-202ENST00000374180 TRAV8-1A0A0A6YYK1 113 aa11.46□□□□□ -0.57
HDHD3-202ENST00000374180 A0A1B0GV50 99 aa11.46□□□□□ -0.57
HDHD3-202ENST00000374180 APOC3P02656 99 aa11.46□□□□□ -0.57
HDHD3-202ENST00000374180 TCRAP04437 139 aa11.46□□□□□ -0.57
HDHD3-202ENST00000374180 SPART-AS1P0CW21 52 aa11.46□□□□□ -0.57
HDHD3-202ENST00000374180 AZU1P20160 251 aa11.46□□□□□ -0.57
HDHD3-202ENST00000374180 BTN1A1Q13410 526 aa11.46□□□□□ -0.57
HDHD3-202ENST00000374180 CELA1Q9UNI1 258 aa11.46□□□□□ -0.57
HDHD3-202ENST00000374180 FAM74A7A6NL05 159 aa11.45□□□□□ -0.58
HDHD3-202ENST00000374180 PHLDA1Q8WV24 401 aaPredicted RBP11.45□□□□□ -0.58
HDHD3-202ENST00000374180 PYGO2Q9BRQ0 406 aa11.45□□□□□ -0.58
HDHD3-202ENST00000374180 STARD9Q9P2P6 4700 aa11.45□□□□□ -0.58
HDHD3-202ENST00000374180 TMEM218A2RU14 115 aa11.44□□□□□ -0.58
HDHD3-202ENST00000374180 ZNF324O75467 553 aaPredicted RBP11.44□□□□□ -0.58
HDHD3-202ENST00000374180 FAM222AQ5U5X8 452 aa11.44□□□□□ -0.58
HDHD3-202ENST00000374180 CST9LP1Q5W188 147 aa11.44□□□□□ -0.58
HDHD3-202ENST00000374180 CYB561D1Q8N8Q1 229 aa11.44□□□□□ -0.58
HDHD3-202ENST00000374180 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.44□□□□□ -0.58
HDHD3-202ENST00000374180 SGK494Q96LW2 274 aa11.44□□□□□ -0.58
HDHD3-202ENST00000374180 ATG101Q9BSB4 218 aa11.44□□□□□ -0.58
HDHD3-202ENST00000374180 DKK2Q9UBU2 259 aa11.44□□□□□ -0.58
HDHD3-202ENST00000374180 TEX48A0A1B0GUV7 120 aa11.44□□□□□ -0.58
HDHD3-202ENST00000374180 NUPR2A6NF83 97 aa11.44□□□□□ -0.58
HDHD3-202ENST00000374180 PRR9Q5T870 116 aa11.44□□□□□ -0.58
HDHD3-202ENST00000374180 CEMP1Q6PRD7 247 aaPredicted RBP11.44□□□□□ -0.58
HDHD3-202ENST00000374180 ZNF493Q6ZR52 646 aa11.44□□□□□ -0.58
HDHD3-202ENST00000374180 C16orf74Q96GX8 76 aa11.44□□□□□ -0.58
HDHD3-202ENST00000374180 LOC105371267A0A1B0GV96 52 aa11.43□□□□□ -0.58
HDHD3-202ENST00000374180 C12orf74Q32Q52 190 aa11.43□□□□□ -0.58
HDHD3-202ENST00000374180 SVBPQ8N300 66 aa11.43□□□□□ -0.58
HDHD3-202ENST00000374180 TMEM263Q8WUH6 116 aaKnown RBP11.43□□□□□ -0.58
HDHD3-202ENST00000374180 NDFIP1Q9BT67 221 aa11.43□□□□□ -0.58
HDHD3-202ENST00000374180 TREM1Q9NP99 234 aa11.43□□□□□ -0.58
HDHD3-202ENST00000374180 ARL2-SNX15V9GYD0 113 aa11.43□□□□□ -0.58
HDHD3-202ENST00000374180 F6UZH7 168 aa11.42□□□□□ -0.58
HDHD3-202ENST00000374180 PAGE4O60829 102 aa11.42□□□□□ -0.58
HDHD3-202ENST00000374180 PPT1P50897 306 aa11.42□□□□□ -0.58
HDHD3-202ENST00000374180 FLI1Q01543 452 aaPredicted RBP11.42□□□□□ -0.58
HDHD3-202ENST00000374180 Q6ZTC4 211 aa11.42□□□□□ -0.58
HDHD3-202ENST00000374180 TMEM75Q8N9X5 138 aa11.42□□□□□ -0.58
HDHD3-202ENST00000374180 RNASE8Q8TDE3 154 aaKnown RBP11.42□□□□□ -0.58
HDHD3-202ENST00000374180 HIST1H2BAQ96A08 127 aa11.42□□□□□ -0.58
HDHD3-202ENST00000374180 TVP23CQ96ET8 276 aa11.42□□□□□ -0.58
HDHD3-202ENST00000374180 PSG8Q9UQ74 426 aa11.42□□□□□ -0.58
HDHD3-202ENST00000374180 TRAV1-1A0A0B4J248 108 aa11.41□□□□□ -0.58
HDHD3-202ENST00000374180 FBLL1A6NHQ2 334 aaKnown RBP11.41□□□□□ -0.58
HDHD3-202ENST00000374180 C11orf94C9JXX5 98 aa11.41□□□□□ -0.58
HDHD3-202ENST00000374180 PEX7O00628 323 aa11.41□□□□□ -0.58
HDHD3-202ENST00000374180 Q6ZQT7 251 aa11.41□□□□□ -0.58
HDHD3-202ENST00000374180 PRNTQ86SH4 94 aa11.41□□□□□ -0.58
HDHD3-202ENST00000374180 LINC00479Q96M42 142 aa11.41□□□□□ -0.58
HDHD3-202ENST00000374180 LINC00467Q9BRT7 94 aa11.41□□□□□ -0.58
HDHD3-202ENST00000374180 CARHSP1Q9Y2V2 147 aaKnown RBP11.41□□□□□ -0.58
HDHD3-202ENST00000374180 KLK5Q9Y337 293 aaPredicted RBP11.41□□□□□ -0.58
HDHD3-202ENST00000374180 TIMM8BQ9Y5J9 83 aaPredicted RBP11.41□□□□□ -0.58
HDHD3-202ENST00000374180 DYNC2H1Q8NCM8 4307 aaKnown RBP11.4□□□□□ -0.58
HDHD3-202ENST00000374180 PLAC8L1A1L4L8 177 aa11.4□□□□□ -0.58
HDHD3-202ENST00000374180 CBY3A6NI87 242 aa11.4□□□□□ -0.58
HDHD3-202ENST00000374180 LYRM9A8MSI8 78 aa11.4□□□□□ -0.58
HDHD3-202ENST00000374180 IGLV2-11P01706 119 aa11.4□□□□□ -0.58
HDHD3-202ENST00000374180 C10orf91Q5T1B1 145 aa11.4□□□□□ -0.58
HDHD3-202ENST00000374180 Q6AWC8 147 aa11.4□□□□□ -0.58
HDHD3-202ENST00000374180 TCEAL7Q9BRU2 100 aa11.4□□□□□ -0.58
HDHD3-202ENST00000374180 SEC11CQ9BY50 192 aa11.4□□□□□ -0.58
HDHD3-202ENST00000374180 IGHV1OR15-1A0A075B7D0 117 aa11.39□□□□□ -0.59
HDHD3-202ENST00000374180 TRAV10A0A0B4J240 114 aa11.39□□□□□ -0.59
HDHD3-202ENST00000374180 TRAV34A0A0B4J273 112 aa11.39□□□□□ -0.59
HDHD3-202ENST00000374180 F8W036 122 aa11.39□□□□□ -0.59
HDHD3-202ENST00000374180 ATP5G3P48201 142 aa11.39□□□□□ -0.59
HDHD3-202ENST00000374180 DAD1P61803 113 aa11.39□□□□□ -0.59
HDHD3-202ENST00000374180 CCL20P78556 96 aa11.39□□□□□ -0.59
HDHD3-202ENST00000374180 SAPCD1Q5SSQ6 148 aa11.39□□□□□ -0.59
HDHD3-202ENST00000374180 NOP10Q9NPE3 64 aaKnown RBP11.39□□□□□ -0.59
HDHD3-202ENST00000374180 GNG13Q9P2W3 67 aa11.39□□□□□ -0.59
HDHD3-202ENST00000374180 SNURFLB1AK76 121 aa11.38□□□□□ -0.59
HDHD3-202ENST00000374180 SNAPINO95295 136 aa11.38□□□□□ -0.59
HDHD3-202ENST00000374180 ANXA2RQ3ZCQ2 193 aa11.38□□□□□ -0.59
HDHD3-202ENST00000374180 DEFB131BA0A096LNP1 70 aa11.38□□□□□ -0.59
HDHD3-202ENST00000374180 TRAV21A0A0B4J279 112 aa11.38□□□□□ -0.59
HDHD3-202ENST00000374180 DEFB130BP0DP73 79 aa11.38□□□□□ -0.59
HDHD3-202ENST00000374180 DEFB130AP0DP74 79 aa11.38□□□□□ -0.59
HDHD3-202ENST00000374180 MUC21Q5SSG8 566 aa11.38□□□□□ -0.59
HDHD3-202ENST00000374180 LYPD6BQ8NI32 183 aa11.38□□□□□ -0.59
HDHD3-202ENST00000374180 C2CD4CQ8TF44 421 aa11.38□□□□□ -0.59
HDHD3-202ENST00000374180 C8orf49Q96NF6 230 aa11.38□□□□□ -0.59
HDHD3-202ENST00000374180 MANBALQ9NQG1 85 aa11.38□□□□□ -0.59
HDHD3-202ENST00000374180 UBE2G1P62253 170 aa11.37□□□□□ -0.59
HDHD3-202ENST00000374180 SMUG1Q53HV7 270 aa11.37□□□□□ -0.59
HDHD3-202ENST00000374180 FAM159AQ6UWV7 190 aa11.37□□□□□ -0.59
HDHD3-202ENST00000374180 GSN-AS1Q9NRJ2 163 aa11.37□□□□□ -0.59
HDHD3-202ENST00000374180 TP53TG3Q9ULZ0 132 aa11.37□□□□□ -0.59
HDHD3-202ENST00000374180 PEA15Q15121 130 aa11.36□□□□□ -0.59
HDHD3-202ENST00000374180 FMC1Q96HJ9 113 aa11.36□□□□□ -0.59
HDHD3-202ENST00000374180 NAGKQ9UJ70 344 aa11.36□□□□□ -0.59
HDHD3-202ENST00000374180 KLF12Q9Y4X4 402 aa11.36□□□□□ -0.59
HDHD3-202ENST00000374180 LYSTQ99698 3801 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms