RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 USF3Q68DE3 2245 aa11.42□□□□□ -0.58
TRAF1-201ENST00000373887 WDR86Q86TI4 376 aa11.42□□□□□ -0.58
TRAF1-201ENST00000373887 C15orf53Q8NAA6 179 aa11.42□□□□□ -0.58
TRAF1-201ENST00000373887 KIAA2026Q5HYC2 2103 aa11.42□□□□□ -0.58
TRAF1-201ENST00000373887 RHODO00212 210 aa11.41□□□□□ -0.58
TRAF1-201ENST00000373887 DIAPH2-AS1Q14236 149 aa11.41□□□□□ -0.58
TRAF1-201ENST00000373887 TEX36Q5VZQ5 186 aa11.41□□□□□ -0.58
TRAF1-201ENST00000373887 IGKV1OR2-108A0A075B7D4 117 aa11.41□□□□□ -0.58
TRAF1-201ENST00000373887 IGHV1-24A0A0C4DH33 117 aa11.41□□□□□ -0.58
TRAF1-201ENST00000373887 CHKB-CPT1BH3BT56 60 aa11.41□□□□□ -0.58
TRAF1-201ENST00000373887 SPTBN1Q01082 2364 aaKnown RBP11.41□□□□□ -0.58
TRAF1-201ENST00000373887 PLXND1Q9Y4D7 1925 aa11.41□□□□□ -0.58
TRAF1-201ENST00000373887 ARTNQ5T4W7 220 aa11.41□□□□□ -0.58
TRAF1-201ENST00000373887 CEND1Q8N111 149 aa11.41□□□□□ -0.58
TRAF1-201ENST00000373887 SHISA9B4DS77 424 aa11.41□□□□□ -0.58
TRAF1-201ENST00000373887 EGR2P11161 476 aaPredicted RBP11.41□□□□□ -0.58
TRAF1-201ENST00000373887 FOXL2NBQ6ZUU3 175 aa11.41□□□□□ -0.58
TRAF1-201ENST00000373887 C8orf86Q6ZUL3 223 aa11.4□□□□□ -0.58
TRAF1-201ENST00000373887 A0A0J9YY99 117 aa11.4□□□□□ -0.58
TRAF1-201ENST00000373887 MST1LQ2TV78 715 aa11.4□□□□□ -0.58
TRAF1-201ENST00000373887 IGKV2D-24A0A075B6R9 120 aa11.4□□□□□ -0.59
TRAF1-201ENST00000373887 FHL1Q13642 323 aa11.4□□□□□ -0.59
TRAF1-201ENST00000373887 ANKRD29Q8N6D5 301 aa11.4□□□□□ -0.59
TRAF1-201ENST00000373887 NLRC5Q86WI3 1866 aa11.4□□□□□ -0.59
TRAF1-201ENST00000373887 A8MWP6 167 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 H3BMG7 143 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 XCL1P47992 114 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 PDE6HQ13956 83 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 K7EP34 96 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 NPSP0C0P6 89 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 MYLKQ15746 1914 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 NOTCH4Q99466 2003 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 LOXP28300 417 aaPredicted RBP11.39□□□□□ -0.59
TRAF1-201ENST00000373887 QRFPP83859 136 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 TPSG1Q9NRR2 321 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 F8W1H4 67 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 Q0VG73 95 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 PRO1854Q9UHT4 67 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 TRAV13-2A0A0B4J235 113 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 TMEM258P61165 79 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 Q6ZQT7 251 aa11.39□□□□□ -0.59
TRAF1-201ENST00000373887 ZNF407Q9C0G0 2248 aa11.38□□□□□ -0.59
TRAF1-201ENST00000373887 MRPL35Q9NZE8 188 aaKnown RBP11.38□□□□□ -0.59
TRAF1-201ENST00000373887 ROS1P08922 2347 aa11.38□□□□□ -0.59
TRAF1-201ENST00000373887 IGLV2-23P01705 113 aa11.38□□□□□ -0.59
TRAF1-201ENST00000373887 OR11H6Q8NGC7 330 aa11.38□□□□□ -0.59
TRAF1-201ENST00000373887 Q9HAA7 133 aa11.38□□□□□ -0.59
TRAF1-201ENST00000373887 ZNF492Q9P255 531 aa11.38□□□□□ -0.59
TRAF1-201ENST00000373887 IGLV3-9A0A075B6K5 115 aa11.38□□□□□ -0.59
TRAF1-201ENST00000373887 RPL18AQ02543 176 aaKnown RBP11.38□□□□□ -0.59
TRAF1-201ENST00000373887 DEFB112Q30KQ8 113 aa11.38□□□□□ -0.59
TRAF1-201ENST00000373887 K7EP13 123 aa11.38□□□□□ -0.59
TRAF1-201ENST00000373887 IGLC2P0DOY2 106 aa11.38□□□□□ -0.59
TRAF1-201ENST00000373887 IGLC3P0DOY3 106 aa11.38□□□□□ -0.59
TRAF1-201ENST00000373887 APOC4P55056 127 aa11.38□□□□□ -0.59
TRAF1-201ENST00000373887 IGHV4-59P01825 116 aa11.37□□□□□ -0.59
TRAF1-201ENST00000373887 DEFB113Q30KQ7 82 aa11.37□□□□□ -0.59
TRAF1-201ENST00000373887 CFHR4Q92496 578 aa11.37□□□□□ -0.59
TRAF1-201ENST00000373887 C17orf58Q2M2W7 97 aa11.37□□□□□ -0.59
TRAF1-201ENST00000373887 RMI2Q96E14 147 aa11.37□□□□□ -0.59
TRAF1-201ENST00000373887 A0A1W2PPM0 123 aa11.37□□□□□ -0.59
TRAF1-201ENST00000373887 DEFB136Q30KP8 78 aa11.37□□□□□ -0.59
TRAF1-201ENST00000373887 AMTNQ6UX39 209 aa11.37□□□□□ -0.59
TRAF1-201ENST00000373887 ABCA4P78363 2273 aa11.37□□□□□ -0.59
TRAF1-201ENST00000373887 CDKN1BP46527 198 aa11.37□□□□□ -0.59
TRAF1-201ENST00000373887 SS18L2Q9UHA2 77 aa11.37□□□□□ -0.59
TRAF1-201ENST00000373887 SIGLEC8Q9NYZ4 499 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 TRBV19A0A075B6N1 114 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 IGKV1-6A0A0C4DH72 117 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 BVES-AS1Q5T3Y7 98 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 Q8TCH9 128 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 SPRNQ5BIV9 151 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 Q6ZWC4 215 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 WFDC9Q8NEX5 89 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 GAGE12HA6NDE8 117 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 DKK4Q9UBT3 224 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 LRRK1Q38SD2 2015 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 KIF26AQ9ULI4 1882 aaPredicted RBP11.36□□□□□ -0.59
TRAF1-201ENST00000373887 IGHV4-30-2A0A087WSY4 118 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 TRBV6-6A0A0A6YYG2 114 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 NPYP01303 97 aa11.36□□□□□ -0.59
TRAF1-201ENST00000373887 ANAPC1Q9H1A4 1944 aa11.35□□□□□ -0.59
TRAF1-201ENST00000373887 C9JQL5 133 aa11.35□□□□□ -0.59
TRAF1-201ENST00000373887 NTN5Q8WTR8 489 aaPredicted RBP11.35□□□□□ -0.59
TRAF1-201ENST00000373887 PKDREJQ9NTG1 2253 aa11.35□□□□□ -0.59
TRAF1-201ENST00000373887 COX8AP10176 69 aa11.35□□□□□ -0.59
TRAF1-201ENST00000373887 HERVK_113P63121 156 aa11.35□□□□□ -0.59
TRAF1-201ENST00000373887 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.34□□□□□ -0.59
TRAF1-201ENST00000373887 IGKV2-29A2NJV5 120 aaPredicted RBP11.34□□□□□ -0.59
TRAF1-201ENST00000373887 IGLL1P15814 213 aa11.34□□□□□ -0.59
TRAF1-201ENST00000373887 FNDC10F2Z333 226 aa11.34□□□□□ -0.59
TRAF1-201ENST00000373887 J3QQQ9 107 aa11.34□□□□□ -0.59
TRAF1-201ENST00000373887 SLX1AQ9BQ83 275 aa11.34□□□□□ -0.59
TRAF1-201ENST00000373887 NBASA2RRP1 2371 aa11.34□□□□□ -0.59
TRAF1-201ENST00000373887 J3QLI3 93 aa11.34□□□□□ -0.59
TRAF1-201ENST00000373887 SPANXA1Q9NS26 97 aa11.34□□□□□ -0.59
TRAF1-201ENST00000373887 DKK2Q9UBU2 259 aa11.34□□□□□ -0.59
TRAF1-201ENST00000373887 E9PQ18 207 aa11.33□□□□□ -0.59
TRAF1-201ENST00000373887 HOXB4P17483 251 aaPredicted RBP11.33□□□□□ -0.59
TRAF1-201ENST00000373887 C20orf144Q9BQM9 153 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms