RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 E9PLN8 166 aa5.33□□□□□ -1.56
CHD6-203ENST00000373233 HLA-DRB4P13762 266 aa5.33□□□□□ -1.56
CHD6-203ENST00000373233 LGALS9BQ3B8N2 356 aa5.33□□□□□ -1.56
CHD6-203ENST00000373233 LGALS9CQ6DKI2 356 aa5.33□□□□□ -1.56
CHD6-203ENST00000373233 ZNF497Q6ZNH5 498 aa5.33□□□□□ -1.56
CHD6-203ENST00000373233 Q6ZS49 121 aa5.33□□□□□ -1.56
CHD6-203ENST00000373233 C20orf78Q9BR46 151 aa5.33□□□□□ -1.56
CHD6-203ENST00000373233 RETNQ9HD89 108 aa5.33□□□□□ -1.56
CHD6-203ENST00000373233 HLA-DRB4X5D2U9 266 aa5.33□□□□□ -1.56
CHD6-203ENST00000373233 ANAPC10Q9UM13 185 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 H0YJW9 148 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 K7ENP7 123 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 FXYD2P54710 66 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 C12orf77C9JDV5 145 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 DUSP14O95147 198 aaKnown RBP5.32□□□□□ -1.56
CHD6-203ENST00000373233 LINC01545Q5VT33 79 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 DTX2Q86UW9 622 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 MBD3L4A6NDZ8 208 aaPredicted RBP5.32□□□□□ -1.56
CHD6-203ENST00000373233 MBD3L3A6NE82 208 aaPredicted RBP5.32□□□□□ -1.56
CHD6-203ENST00000373233 MBD3L5A6NJ08 208 aaPredicted RBP5.32□□□□□ -1.56
CHD6-203ENST00000373233 ZNF474Q6S9Z5 364 aaPredicted RBP5.32□□□□□ -1.56
CHD6-203ENST00000373233 LRRC75A-AS1Q8N1F1 130 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 RNF152Q8N8N0 203 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 MBD3L2Q8NHZ7 208 aaPredicted RBP5.32□□□□□ -1.56
CHD6-203ENST00000373233 MTORP42345 2549 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 NTF4P34130 210 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 VWC2Q2TAL6 325 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 RNF144BQ7Z419 303 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 WIPF2Q8TF74 440 aaPredicted RBP5.32□□□□□ -1.56
CHD6-203ENST00000373233 ZNF492Q9P255 531 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 A0A0G2JNJ9 132 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 C5orf24Q7Z6I8 188 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 Q9UFV3 132 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 B9A039 149 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 SEC61GP60059 68 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 PRR30Q53SZ7 412 aaPredicted RBP5.32□□□□□ -1.56
CHD6-203ENST00000373233 NUPR1O60356 82 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 EGR2P11161 476 aaPredicted RBP5.32□□□□□ -1.56
CHD6-203ENST00000373233 WFDC11Q8NEX6 87 aa5.32□□□□□ -1.56
CHD6-203ENST00000373233 WT1P19544 449 aaPredicted RBP5.32□□□□□ -1.56
CHD6-203ENST00000373233 IGKV3D-7A0A0C4DH55 119 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 LINC00158P58513 81 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 C3orf36Q3SXR2 165 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 RNASE6Q93091 150 aaKnown RBP5.31□□□□□ -1.56
CHD6-203ENST00000373233 IGKV1-12A0A0C4DH73 117 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 IGKV1D-12P01611 117 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 ZNF493Q6ZR52 646 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 FAM90A1Q86YD7 464 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 RNF166Q96A37 237 aaPredicted RBP5.31□□□□□ -1.56
CHD6-203ENST00000373233 IGHV3-72A0A0B4J1Y9 119 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 HAMPP81172 84 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 JPT2Q9H910 190 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 RNASE2P10153 161 aaKnown RBP5.31□□□□□ -1.56
CHD6-203ENST00000373233 DUTP33316 252 aaKnown RBP5.31□□□□□ -1.56
CHD6-203ENST00000373233 LY6DQ14210 128 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 IL17RELQ6ZVW7 336 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 C10orf105Q8TEF2 133 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 SLC50A1Q9BRV3 221 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 SH2D1AO60880 128 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 SUMO4Q6EEV6 95 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 M0R1W7 72 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 ARMS2P0C7Q2 107 aa5.31□□□□□ -1.56
CHD6-203ENST00000373233 HIGD1BQ9P298 99 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 MUC4Q99102 2169 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 SAA2P0DJI9 122 aaPredicted RBP5.3□□□□□ -1.56
CHD6-203ENST00000373233 NDUFS7O75251 213 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 Q8N8P6 123 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 WFDC9Q8NEX5 89 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 TRBV6-6A0A0A6YYG2 114 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 NDUFC2-KCTD14E9PQ53 114 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 MRPL35Q9NZE8 188 aaKnown RBP5.3□□□□□ -1.56
CHD6-203ENST00000373233 VPREB3Q9UKI3 123 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 TINCRA0A1B0GVN0 87 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 SNRPD3P62318 126 aaKnown RBP5.3□□□□□ -1.56
CHD6-203ENST00000373233 EXOC3-AS1Q8N2X6 119 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 NAV2Q8IVL1 2488 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 TRBV25-1A0A075B6N4 114 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 hADV29S1A0JD25 119 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 CFC1BP0CG36 223 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 CFC1P0CG37 223 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 WIPF3A6NGB9 483 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 F6UB75 175 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 TIMM23O14925 209 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 NDUFB8O95169 186 aa5.3□□□□□ -1.56
CHD6-203ENST00000373233 PRB2P02812 416 aaPredicted RBP5.3□□□□□ -1.56
CHD6-203ENST00000373233 ANKRD17O75179 2603 aaKnown RBP5.3□□□□□ -1.56
CHD6-203ENST00000373233 IGKV1-5P01602 117 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 RASL10AQ92737 203 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 IGFL2Q6UWQ7 119 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 DDB2Q92466 427 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 LINC00694P0DN24 101 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 CXCL5P42830 114 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 LINC00479Q96M42 142 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 A0A0B4J2C4 111 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 FAM104BQ5XKR9 115 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 FAM215AQ9Y5M1 114 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 IGKV2-40A0A087WW87 121 aaPredicted RBP5.29□□□□□ -1.56
CHD6-203ENST00000373233 IGKV2D-40P01614 121 aaPredicted RBP5.29□□□□□ -1.56
CHD6-203ENST00000373233 TMEM213A2RRL7 107 aa5.29□□□□□ -1.56
CHD6-203ENST00000373233 ZNF503-AS2A6NEH8 195 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms