RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 ERCC8Q13216 396 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 SLAQ13239 276 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 TM4SF20Q53R12 229 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 NDUFA11Q86Y39 141 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 TMEM256Q8N2U0 113 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 OR11H1Q8NG94 326 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 TP53TG3Q9ULZ0 132 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 MAST4O15021 2626 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 BTF3P20290 206 aaKnown RBP9.83□□□□□ -0.84
LDB3-203ENST00000372056 CAMPP49913 170 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 Q0VG73 95 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 IQCJQ1A5X6 159 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 KIAA1644Q3SXP7 199 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 TCTEX1D4Q5JR98 221 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 C16orf92Q96LL3 132 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 NDFIP1Q9BT67 221 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 RHPN1-AS1Q9BWJ2 59 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 IGHV4OR15-8A0A075B7B6 117 aa9.82□□□□□ -0.84
LDB3-203ENST00000372056 A0A087WW49 117 aa9.82□□□□□ -0.84
LDB3-203ENST00000372056 SOCS3O14543 225 aa9.82□□□□□ -0.84
LDB3-203ENST00000372056 KIR2DL5BA0A0G2JN68 375 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 KIR2DL5BA0A0G2JPC4 375 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 HAX1O00165 279 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 EREGO14944 169 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 NUPR1O60356 82 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 ZNF80P51504 273 aaPredicted RBP9.81□□□□□ -0.84
LDB3-203ENST00000372056 LINC00310P59036 64 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 Q6AWC8 147 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 MRPL52Q86TS9 123 aaKnown RBP9.81□□□□□ -0.84
LDB3-203ENST00000372056 KIR2DL5AQ8N109 375 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 AGPAT4-IT1Q9H0P7 198 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 NRN1Q9NPD7 142 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 SIGLEC8Q9NYZ4 499 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 CCL24O00175 119 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 CD28P10747 220 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 SRIP30626 198 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 FHL3Q13643 280 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 OR10J3Q5JRS4 329 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 C9orf47Q6ZRZ4 202 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 C20orf173Q96LM9 149 aa9.81□□□□□ -0.84
LDB3-203ENST00000372056 SSBP4Q9BWG4 385 aaPredicted RBP9.81□□□□□ -0.84
LDB3-203ENST00000372056 A0A1B0GUT8 65 aa9.8□□□□□ -0.84
LDB3-203ENST00000372056 TMEM189A5PLL7 270 aa9.8□□□□□ -0.84
LDB3-203ENST00000372056 F2Z2F3 143 aa9.8□□□□□ -0.84
LDB3-203ENST00000372056 SERF1AO75920 110 aa9.8□□□□□ -0.84
LDB3-203ENST00000372056 ESDP10768 282 aa9.8□□□□□ -0.84
LDB3-203ENST00000372056 ZNF138P52744 262 aa9.8□□□□□ -0.84
LDB3-203ENST00000372056 PAFAH1B2P68402 229 aa9.8□□□□□ -0.84
LDB3-203ENST00000372056 TMEM78Q5T7P6 136 aa9.8□□□□□ -0.84
LDB3-203ENST00000372056 CITED2Q99967 270 aaPredicted RBP9.8□□□□□ -0.84
LDB3-203ENST00000372056 SNHG12Q9BXW3 62 aa9.8□□□□□ -0.84
LDB3-203ENST00000372056 PPP1R14DQ9NXH3 145 aa9.8□□□□□ -0.84
LDB3-203ENST00000372056 TRAV2A0A0B4J234 112 aa9.79□□□□□ -0.84
LDB3-203ENST00000372056 ID1P41134 155 aa9.79□□□□□ -0.84
LDB3-203ENST00000372056 SYNJ2BPP57105 145 aa9.79□□□□□ -0.84
LDB3-203ENST00000372056 BAGE3Q86Y29 109 aa9.79□□□□□ -0.84
LDB3-203ENST00000372056 ZNF738Q8NE65 137 aa9.79□□□□□ -0.84
LDB3-203ENST00000372056 OR9G4Q8NGQ1 327 aa9.79□□□□□ -0.84
LDB3-203ENST00000372056 HIVEP1P15822 2718 aa9.79□□□□□ -0.84
LDB3-203ENST00000372056 TMEM213A2RRL7 107 aa9.79□□□□□ -0.84
LDB3-203ENST00000372056 ARMS2P0C7Q2 107 aa9.79□□□□□ -0.84
LDB3-203ENST00000372056 RAB4AP20338 218 aa9.79□□□□□ -0.84
LDB3-203ENST00000372056 EDN2P20800 178 aa9.79□□□□□ -0.84
LDB3-203ENST00000372056 RPL11P62913 178 aaKnown RBP9.79□□□□□ -0.84
LDB3-203ENST00000372056 SRSF2Q01130 221 aaKnown RBP9.79□□□□□ -0.84
LDB3-203ENST00000372056 NF1P21359 2839 aa9.78□□□□□ -0.84
LDB3-203ENST00000372056 MTORP42345 2549 aa9.78□□□□□ -0.84
LDB3-203ENST00000372056 TMSB15BA0A087X1C1 80 aa9.78□□□□□ -0.84
LDB3-203ENST00000372056 C2orf70A6NJV1 201 aa9.78□□□□□ -0.84
LDB3-203ENST00000372056 FABP5P3A8MUU1 101 aa9.78□□□□□ -0.84
LDB3-203ENST00000372056 M0R143 59 aa9.78□□□□□ -0.84
LDB3-203ENST00000372056 RPS20P60866 119 aaKnown RBP9.78□□□□□ -0.84
LDB3-203ENST00000372056 ZNF575Q86XF7 245 aa9.78□□□□□ -0.84
LDB3-203ENST00000372056 TRAV25A0A0B4J276 109 aa9.77□□□□□ -0.85
LDB3-203ENST00000372056 A0A1B0GW15 77 aa9.77□□□□□ -0.85
LDB3-203ENST00000372056 RIGQ13278 110 aa9.77□□□□□ -0.85
LDB3-203ENST00000372056 ALKBH7Q9BT30 221 aaPredicted RBP9.77□□□□□ -0.85
LDB3-203ENST00000372056 TPPP3Q9BW30 176 aa9.77□□□□□ -0.85
LDB3-203ENST00000372056 NAGKQ9UJ70 344 aa9.77□□□□□ -0.85
LDB3-203ENST00000372056 OVOL1O14753 267 aa9.76□□□□□ -0.85
LDB3-203ENST00000372056 PRR31Q5SQ13 230 aa9.76□□□□□ -0.85
LDB3-203ENST00000372056 GATD1Q8NB37 220 aa9.76□□□□□ -0.85
LDB3-203ENST00000372056 C18orf32Q8TCD1 76 aa9.76□□□□□ -0.85
LDB3-203ENST00000372056 RAX2Q96IS3 184 aa9.76□□□□□ -0.85
LDB3-203ENST00000372056 RCHY1Q96PM5 261 aa9.76□□□□□ -0.85
LDB3-203ENST00000372056 LENEPQ9Y5L5 61 aa9.76□□□□□ -0.85
LDB3-203ENST00000372056 IGKV3-7A0A075B6H7 116 aa9.76□□□□□ -0.85
LDB3-203ENST00000372056 ZNF705DP0CH99 300 aaPredicted RBP9.76□□□□□ -0.85
LDB3-203ENST00000372056 ZNF705BP0CI00 300 aaPredicted RBP9.76□□□□□ -0.85
LDB3-203ENST00000372056 CTRLP40313 264 aa9.76□□□□□ -0.85
LDB3-203ENST00000372056 CMC4P56277 68 aaPredicted RBP9.76□□□□□ -0.85
LDB3-203ENST00000372056 LINC01559Q495D7 138 aa9.76□□□□□ -0.85
LDB3-203ENST00000372056 LYZL1Q6UWQ5 148 aa9.76□□□□□ -0.85
LDB3-203ENST00000372056 OR2K2Q8NGT1 345 aa9.76□□□□□ -0.85
LDB3-203ENST00000372056 ORM1P02763 201 aa9.75□□□□□ -0.85
LDB3-203ENST00000372056 IGLC6P0CF74 106 aa9.75□□□□□ -0.85
LDB3-203ENST00000372056 HIST1H1AQ02539 215 aaPredicted RBP9.75□□□□□ -0.85
LDB3-203ENST00000372056 OR10J6PQ8NGY7 276 aa9.75□□□□□ -0.85
LDB3-203ENST00000372056 DCANP1Q8TF63 244 aa9.75□□□□□ -0.85
LDB3-203ENST00000372056 BORCS7Q96B45 105 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms