RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SLURP1P55000 103 aa11.6□□□□□ -0.55
NDC1-201ENST00000371429 NPC2P61916 151 aa11.6□□□□□ -0.55
NDC1-201ENST00000371429 FOXI2Q6ZQN5 318 aa11.6□□□□□ -0.55
NDC1-201ENST00000371429 HIST1H2BLQ99880 126 aa11.6□□□□□ -0.55
NDC1-201ENST00000371429 PRIMA1Q86XR5 153 aa11.6□□□□□ -0.55
NDC1-201ENST00000371429 NPBQ8NG41 125 aa11.6□□□□□ -0.55
NDC1-201ENST00000371429 SPCS1Q9Y6A9 102 aa11.6□□□□□ -0.55
NDC1-201ENST00000371429 C5orf30Q96GV9 206 aa11.6□□□□□ -0.55
NDC1-201ENST00000371429 PRSS46E5RG02 174 aa11.59□□□□□ -0.55
NDC1-201ENST00000371429 SPXQ9BT56 116 aa11.59□□□□□ -0.55
NDC1-201ENST00000371429 ZNF561-AS1K7EIQ3 104 aa11.59□□□□□ -0.55
NDC1-201ENST00000371429 CYYR1Q96J86 154 aa11.59□□□□□ -0.55
NDC1-201ENST00000371429 CT83Q5H943 113 aa11.59□□□□□ -0.55
NDC1-201ENST00000371429 F6UB75 175 aa11.58□□□□□ -0.56
NDC1-201ENST00000371429 M0R2P5 195 aa11.58□□□□□ -0.56
NDC1-201ENST00000371429 GP9P14770 177 aa11.58□□□□□ -0.56
NDC1-201ENST00000371429 SPAG8Q99932 426 aaPredicted RBP11.58□□□□□ -0.56
NDC1-201ENST00000371429 H3BUT2 72 aa11.58□□□□□ -0.56
NDC1-201ENST00000371429 TMEM256Q8N2U0 113 aa11.58□□□□□ -0.56
NDC1-201ENST00000371429 AJUBAQ96IF1 538 aa11.58□□□□□ -0.56
NDC1-201ENST00000371429 Q6ZSR3 168 aa11.58□□□□□ -0.56
NDC1-201ENST00000371429 TIMM21Q9BVV7 248 aa11.58□□□□□ -0.56
NDC1-201ENST00000371429 SDHAF1A6NFY7 115 aa11.57□□□□□ -0.56
NDC1-201ENST00000371429 MYMXA0A1B0GTQ4 84 aa11.57□□□□□ -0.56
NDC1-201ENST00000371429 I3L3M4 83 aa11.57□□□□□ -0.56
NDC1-201ENST00000371429 FAM104BQ5XKR9 115 aa11.57□□□□□ -0.56
NDC1-201ENST00000371429 Q8N9W7 124 aa11.57□□□□□ -0.56
NDC1-201ENST00000371429 FXYD5Q96DB9 178 aa11.57□□□□□ -0.56
NDC1-201ENST00000371429 IGF2BP2-AS1Q96M15 143 aa11.57□□□□□ -0.56
NDC1-201ENST00000371429 TMEM243Q9BU79 118 aa11.57□□□□□ -0.56
NDC1-201ENST00000371429 TP53TG1Q9Y2A0 90 aa11.57□□□□□ -0.56
NDC1-201ENST00000371429 C19orf84I3L1E1 186 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 PRR20EP86478 221 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 PRR20CP86479 221 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 PRR20DP86480 221 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 PRR20BP86481 221 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 PRR20AP86496 221 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 MSMPQ1L6U9 139 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 ZC2HC1BQ5TFG8 222 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 IGHV3-38A0A0C4DH36 116 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 SLAQ13239 276 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 ZNF726P1Q15940 193 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 VWC2Q2TAL6 325 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 C5orf56Q8N8D9 126 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 ERG28Q9UKR5 140 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 NAV3Q8IVL0 2385 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 A0A096LPF7 62 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 TSPAN13O95857 204 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 HIST3H2BBQ8N257 126 aa11.56□□□□□ -0.56
NDC1-201ENST00000371429 GAGE6Q13070 117 aa11.55□□□□□ -0.56
NDC1-201ENST00000371429 C2orf66Q6UXQ4 117 aa11.55□□□□□ -0.56
NDC1-201ENST00000371429 GATD1Q8NB37 220 aa11.55□□□□□ -0.56
NDC1-201ENST00000371429 PIFOQ8TCI5 191 aa11.55□□□□□ -0.56
NDC1-201ENST00000371429 HLA-DMBP28068 263 aa11.55□□□□□ -0.56
NDC1-201ENST00000371429 Q8N7P7 452 aa11.55□□□□□ -0.56
NDC1-201ENST00000371429 ORAOV1Q8WV07 137 aa11.55□□□□□ -0.56
NDC1-201ENST00000371429 RITA1Q96K30 269 aa11.55□□□□□ -0.56
NDC1-201ENST00000371429 APRG1Q8IVJ8 170 aa11.55□□□□□ -0.56
NDC1-201ENST00000371429 C17orf77Q96MU5 243 aa11.55□□□□□ -0.56
NDC1-201ENST00000371429 GSN-AS1Q9NRJ2 163 aa11.55□□□□□ -0.56
NDC1-201ENST00000371429 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.54□□□□□ -0.56
NDC1-201ENST00000371429 TLN1Q9Y490 2541 aaKnown RBP11.54□□□□□ -0.56
NDC1-201ENST00000371429 IGLV1-47P01700 117 aa11.54□□□□□ -0.56
NDC1-201ENST00000371429 TTC32Q5I0X7 151 aa11.54□□□□□ -0.56
NDC1-201ENST00000371429 NOP10Q9NPE3 64 aaKnown RBP11.54□□□□□ -0.56
NDC1-201ENST00000371429 EREGO14944 169 aa11.54□□□□□ -0.56
NDC1-201ENST00000371429 LOXL1Q08397 574 aaPredicted RBP11.54□□□□□ -0.56
NDC1-201ENST00000371429 RMI2Q96E14 147 aa11.54□□□□□ -0.56
NDC1-201ENST00000371429 PYGO2Q9BRQ0 406 aa11.54□□□□□ -0.56
NDC1-201ENST00000371429 IGLV11-55A0A075B6I3 123 aa11.54□□□□□ -0.56
NDC1-201ENST00000371429 CLPSL1A2RUU4 121 aa11.54□□□□□ -0.56
NDC1-201ENST00000371429 HSD52Q0P140 79 aa11.54□□□□□ -0.56
NDC1-201ENST00000371429 AGPAT4-IT1Q9H0P7 198 aa11.54□□□□□ -0.56
NDC1-201ENST00000371429 GUSBP1Q15486 140 aa11.53□□□□□ -0.56
NDC1-201ENST00000371429 MRPL53Q96EL3 112 aaKnown RBP11.53□□□□□ -0.56
NDC1-201ENST00000371429 ZC2HC1AQ96GY0 325 aa11.53□□□□□ -0.56
NDC1-201ENST00000371429 PLXNB3Q9ULL4 1909 aa11.53□□□□□ -0.56
NDC1-201ENST00000371429 SYS1-DBNDD2H3BUS1 97 aa11.53□□□□□ -0.56
NDC1-201ENST00000371429 K7EIM0 57 aa11.53□□□□□ -0.56
NDC1-201ENST00000371429 C3orf79P0CE67 100 aa11.53□□□□□ -0.56
NDC1-201ENST00000371429 PRSS57Q6UWY2 283 aa11.53□□□□□ -0.56
NDC1-201ENST00000371429 EML6Q6ZMW3 1958 aa11.53□□□□□ -0.56
NDC1-201ENST00000371429 FAM231DQ6ZW35 169 aa11.52□□□□□ -0.56
NDC1-201ENST00000371429 DYNAPQ8N1N2 210 aa11.52□□□□□ -0.56
NDC1-201ENST00000371429 SIRPDQ9H106 197 aa11.52□□□□□ -0.56
NDC1-201ENST00000371429 COL4A3Q01955 1670 aa11.52□□□□□ -0.57
NDC1-201ENST00000371429 C9JQL5 133 aa11.52□□□□□ -0.57
NDC1-201ENST00000371429 ZNF625Q96I27 306 aaPredicted RBP11.52□□□□□ -0.57
NDC1-201ENST00000371429 A0A0J9YY99 117 aa11.52□□□□□ -0.57
NDC1-201ENST00000371429 UBE2CO00762 179 aa11.52□□□□□ -0.57
NDC1-201ENST00000371429 ZNF843Q8N446 348 aa11.52□□□□□ -0.57
NDC1-201ENST00000371429 TRAV26-2A0A0B4J265 109 aa11.52□□□□□ -0.57
NDC1-201ENST00000371429 I3L2K1 104 aa11.52□□□□□ -0.57
NDC1-201ENST00000371429 CGB3P0DN86 165 aa11.52□□□□□ -0.57
NDC1-201ENST00000371429 BCL6BQ8N143 479 aaPredicted RBP11.52□□□□□ -0.57
NDC1-201ENST00000371429 INS-IGF2F8WCM5 200 aa11.51□□□□□ -0.57
NDC1-201ENST00000371429 LEPROTO15243 131 aa11.51□□□□□ -0.57
NDC1-201ENST00000371429 CTSGP08311 255 aa11.51□□□□□ -0.57
NDC1-201ENST00000371429 IGHV4OR15-8A0A075B7B6 117 aa11.51□□□□□ -0.57
NDC1-201ENST00000371429 A0A087WW49 117 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms