RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 A0A0G2JNJ9 132 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 A0A1W2PPM0 123 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 DAD1P61803 113 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 Q9UFV3 132 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 PRSS46E5RG02 174 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 RNASE2P10153 161 aaKnown RBP10.07□□□□□ -0.8
HCFC1-202ENST00000369984 DKK4Q9UBT3 224 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 K7ERJ3 54 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 A0A1B0GUS0 222 aa10.06□□□□□ -0.8
HCFC1-202ENST00000369984 TMEM213A2RRL7 107 aa10.06□□□□□ -0.8
HCFC1-202ENST00000369984 J3KT08 172 aa10.06□□□□□ -0.8
HCFC1-202ENST00000369984 OTOGLQ3ZCN5 2332 aa10.06□□□□□ -0.8
HCFC1-202ENST00000369984 TRBV6-6A0A0A6YYG2 114 aa10.06□□□□□ -0.8
HCFC1-202ENST00000369984 SHANK2-AS3Q9BTD1 123 aa10.06□□□□□ -0.8
HCFC1-202ENST00000369984 F5H768 121 aa10.06□□□□□ -0.8
HCFC1-202ENST00000369984 SPINK13Q1W4C9 94 aa10.06□□□□□ -0.8
HCFC1-202ENST00000369984 KLHDC3Q9BQ90 382 aa10.06□□□□□ -0.8
HCFC1-202ENST00000369984 ADCYAP1P18509 176 aa10.06□□□□□ -0.8
HCFC1-202ENST00000369984 U3KQE9 123 aa10.06□□□□□ -0.8
HCFC1-202ENST00000369984 PFN1P07737 140 aaKnown RBP10.05□□□□□ -0.8
HCFC1-202ENST00000369984 KNCNA6PVL3 124 aa10.05□□□□□ -0.8
HCFC1-202ENST00000369984 C18orf32Q8TCD1 76 aa10.05□□□□□ -0.8
HCFC1-202ENST00000369984 TRAV26-2A0A0B4J265 109 aa10.05□□□□□ -0.8
HCFC1-202ENST00000369984 IGHV1-24A0A0C4DH33 117 aa10.05□□□□□ -0.8
HCFC1-202ENST00000369984 K7EP34 96 aa10.05□□□□□ -0.8
HCFC1-202ENST00000369984 APOC4P55056 127 aa10.05□□□□□ -0.8
HCFC1-202ENST00000369984 FAM104BQ5XKR9 115 aa10.05□□□□□ -0.8
HCFC1-202ENST00000369984 LINC01356Q8N9X3 169 aa10.05□□□□□ -0.8
HCFC1-202ENST00000369984 KLK9Q9UKQ9 250 aa10.05□□□□□ -0.8
HCFC1-202ENST00000369984 IGKV1D-17A0A075B6S4 117 aa10.05□□□□□ -0.8
HCFC1-202ENST00000369984 MLANAQ16655 118 aa10.05□□□□□ -0.8
HCFC1-202ENST00000369984 HS3ST6Q96QI5 342 aa10.05□□□□□ -0.8
HCFC1-202ENST00000369984 CFHR1Q03591 330 aa10.04□□□□□ -0.8
HCFC1-202ENST00000369984 ZFP36L1Q07352 338 aaKnown RBP10.04□□□□□ -0.8
HCFC1-202ENST00000369984 RIF1Q5UIP0 2472 aaKnown RBP10.04□□□□□ -0.8
HCFC1-202ENST00000369984 Q8N8P6 123 aa10.04□□□□□ -0.8
HCFC1-202ENST00000369984 TMEM14BQ9NUH8 114 aa10.04□□□□□ -0.8
HCFC1-202ENST00000369984 QRFPP83859 136 aa10.04□□□□□ -0.8
HCFC1-202ENST00000369984 DEFB131AP59861 70 aa10.04□□□□□ -0.8
HCFC1-202ENST00000369984 CYYR1Q96J86 154 aa10.04□□□□□ -0.8
HCFC1-202ENST00000369984 MESP1Q9BRJ9 268 aa10.04□□□□□ -0.8
HCFC1-202ENST00000369984 LYPD2Q6UXB3 125 aa10.04□□□□□ -0.8
HCFC1-202ENST00000369984 A0A0U1RQV1 116 aa10.04□□□□□ -0.8
HCFC1-202ENST00000369984 C2orf66Q6UXQ4 117 aa10.04□□□□□ -0.8
HCFC1-202ENST00000369984 PRO1854Q9UHT4 67 aa10.04□□□□□ -0.8
HCFC1-202ENST00000369984 H3BQ85 93 aa10.03□□□□□ -0.8
HCFC1-202ENST00000369984 MST1P26927 711 aa10.03□□□□□ -0.8
HCFC1-202ENST00000369984 MRPL51Q4U2R6 128 aaKnown RBP10.03□□□□□ -0.8
HCFC1-202ENST00000369984 OR11H6Q8NGC7 330 aa10.03□□□□□ -0.8
HCFC1-202ENST00000369984 XCL2Q9UBD3 114 aa10.03□□□□□ -0.8
HCFC1-202ENST00000369984 ZNF581Q9P0T4 197 aa10.03□□□□□ -0.8
HCFC1-202ENST00000369984 DUX4L9Q6RFH8 374 aaPredicted RBP10.03□□□□□ -0.8
HCFC1-202ENST00000369984 RHODO00212 210 aa10.03□□□□□ -0.8
HCFC1-202ENST00000369984 COX8AP10176 69 aa10.03□□□□□ -0.8
HCFC1-202ENST00000369984 NDUFB8O95169 186 aa10.02□□□□□ -0.8
HCFC1-202ENST00000369984 A0A0G2JRQ6 117 aa10.02□□□□□ -0.8
HCFC1-202ENST00000369984 SMIM27A0A1W2PRY6 76 aa10.02□□□□□ -0.8
HCFC1-202ENST00000369984 OVOL3O00110 214 aa10.02□□□□□ -0.8
HCFC1-202ENST00000369984 TANC1Q9C0D5 1861 aa10.02□□□□□ -0.8
HCFC1-202ENST00000369984 IGHV4-28A0A0C4DH34 117 aa10.02□□□□□ -0.81
HCFC1-202ENST00000369984 C20orf144Q9BQM9 153 aa10.02□□□□□ -0.81
HCFC1-202ENST00000369984 CSPG4Q6UVK1 2322 aa10.02□□□□□ -0.81
HCFC1-202ENST00000369984 A0A1B0GX51 115 aa10.02□□□□□ -0.81
HCFC1-202ENST00000369984 C5orf63A6NC05 138 aa10.02□□□□□ -0.81
HCFC1-202ENST00000369984 HLA-DRB4P13762 266 aa10.02□□□□□ -0.81
HCFC1-202ENST00000369984 HLA-DRB4X5D2U9 266 aa10.02□□□□□ -0.81
HCFC1-202ENST00000369984 Q6ZS49 121 aa10.02□□□□□ -0.81
HCFC1-202ENST00000369984 F6UB75 175 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 PROP1O75360 226 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 ZNF492Q9P255 531 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 TMEM105Q8N8V8 129 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 COL8A2P25067 703 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 RNF144BQ7Z419 303 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 CREBBPQ92793 2442 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 NXPH4O95158 308 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 HLA-DMBP28068 263 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 VWC2Q2TAL6 325 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 BPESC1Q9GZL8 116 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 LY6HO94772 140 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 Q6ZRM9 215 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 C8orf86Q6ZUL3 223 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 VWCEQ96DN2 955 aa10.01□□□□□ -0.81
HCFC1-202ENST00000369984 IGHV3-38A0A0C4DH36 116 aa10□□□□□ -0.81
HCFC1-202ENST00000369984 MPLKIPQ8TAP9 179 aa10□□□□□ -0.81
HCFC1-202ENST00000369984 ZNRD1Q9P1U0 126 aa10□□□□□ -0.81
HCFC1-202ENST00000369984 PAX9P55771 341 aa10□□□□□ -0.81
HCFC1-202ENST00000369984 SDHAF1A6NFY7 115 aa10□□□□□ -0.81
HCFC1-202ENST00000369984 MUSTN1Q8IVN3 82 aa10□□□□□ -0.81
HCFC1-202ENST00000369984 IGLC2P0DOY2 106 aa10□□□□□ -0.81
HCFC1-202ENST00000369984 IGLC3P0DOY3 106 aa10□□□□□ -0.81
HCFC1-202ENST00000369984 ATP6V0E1O15342 81 aa10□□□□□ -0.81
HCFC1-202ENST00000369984 Q6ZWC4 215 aa10□□□□□ -0.81
HCFC1-202ENST00000369984 CLPSL2Q6UWE3 100 aa9.99□□□□□ -0.81
HCFC1-202ENST00000369984 FAM236AA0A1B0GUQ0 79 aa9.99□□□□□ -0.81
HCFC1-202ENST00000369984 FAM236BA0A1B0GV22 79 aa9.99□□□□□ -0.81
HCFC1-202ENST00000369984 RUSC1-AS1Q66K80 236 aa9.99□□□□□ -0.81
HCFC1-202ENST00000369984 AMTNQ6UX39 209 aa9.99□□□□□ -0.81
HCFC1-202ENST00000369984 LINC01619G3V211 115 aa9.99□□□□□ -0.81
HCFC1-202ENST00000369984 CRYGCP07315 174 aa9.99□□□□□ -0.81
HCFC1-202ENST00000369984 CFHR4Q92496 578 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms