RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 PRO1933Q9H354 126 aa10.56□□□□□ -0.72
HMGCS2-201ENST00000369406 TCAPO15273 167 aa10.55□□□□□ -0.72
HMGCS2-201ENST00000369406 P01737 135 aa10.55□□□□□ -0.72
HMGCS2-201ENST00000369406 TYMSP04818 313 aa10.55□□□□□ -0.72
HMGCS2-201ENST00000369406 TMEM61Q8N0U2 210 aa10.55□□□□□ -0.72
HMGCS2-201ENST00000369406 PPP1R14DQ9NXH3 145 aa10.55□□□□□ -0.72
HMGCS2-201ENST00000369406 IZUMO1RA6ND01 250 aa10.55□□□□□ -0.72
HMGCS2-201ENST00000369406 NDUFA6P56556 154 aa10.55□□□□□ -0.72
HMGCS2-201ENST00000369406 NUP35Q8NFH5 326 aa10.55□□□□□ -0.72
HMGCS2-201ENST00000369406 OR10D4PQ8NGN7 298 aa10.55□□□□□ -0.72
HMGCS2-201ENST00000369406 C11orf21Q9P2W6 132 aa10.55□□□□□ -0.72
HMGCS2-201ENST00000369406 CMYA5Q8N3K9 4069 aa10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 ZNF138P52744 262 aa10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 SPATA3Q8NHX4 192 aa10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 FRZBQ92765 325 aa10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 C2orf88Q9BSF0 95 aa10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 SRD5A3Q9H8P0 318 aa10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 TMSB15BA0A087X1C1 80 aa10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 CD33P20138 364 aa10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 HIST1H1AQ02539 215 aaPredicted RBP10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 PSMG4Q5JS54 123 aa10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 MRPL54Q6P161 138 aaKnown RBP10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 OR8A1Q8NGG7 326 aa10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 OR2D3Q8NGH3 330 aa10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 TSKUQ8WUA8 353 aa10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 STAB1Q9NY15 2570 aa10.54□□□□□ -0.72
HMGCS2-201ENST00000369406 HIGD1CA8MV81 97 aa10.53□□□□□ -0.72
HMGCS2-201ENST00000369406 J3KRW8 73 aa10.53□□□□□ -0.72
HMGCS2-201ENST00000369406 PKIAP61925 76 aa10.53□□□□□ -0.72
HMGCS2-201ENST00000369406 DEFB114Q30KQ6 69 aa10.53□□□□□ -0.72
HMGCS2-201ENST00000369406 CD300EQ496F6 205 aaPredicted RBP10.53□□□□□ -0.72
HMGCS2-201ENST00000369406 SAPCD1Q5SSQ6 148 aa10.53□□□□□ -0.72
HMGCS2-201ENST00000369406 TMEM78Q5T7P6 136 aa10.53□□□□□ -0.72
HMGCS2-201ENST00000369406 FAM19A4Q96LR4 140 aa10.53□□□□□ -0.72
HMGCS2-201ENST00000369406 PEMTQ9UBM1 199 aa10.53□□□□□ -0.72
HMGCS2-201ENST00000369406 NOTCH3Q9UM47 2321 aa10.52□□□□□ -0.72
HMGCS2-201ENST00000369406 BMI1P35226 326 aa10.52□□□□□ -0.73
HMGCS2-201ENST00000369406 FAM162BQ5T6X4 162 aa10.52□□□□□ -0.73
HMGCS2-201ENST00000369406 ZFAND2AQ8N6M9 145 aa10.52□□□□□ -0.73
HMGCS2-201ENST00000369406 DAZAP1Q96EP5 407 aaKnown RBP10.52□□□□□ -0.73
HMGCS2-201ENST00000369406 TSTD3H0UI37 97 aa10.52□□□□□ -0.73
HMGCS2-201ENST00000369406 OVOL1O14753 267 aa10.52□□□□□ -0.73
HMGCS2-201ENST00000369406 RAB4BP61018 213 aa10.52□□□□□ -0.73
HMGCS2-201ENST00000369406 ACTL10Q5JWF8 245 aa10.52□□□□□ -0.73
HMGCS2-201ENST00000369406 CLEC5AQ9NY25 188 aa10.52□□□□□ -0.73
HMGCS2-201ENST00000369406 HIST1H2BKO60814 126 aa10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 HIST1H2BJP06899 126 aa10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 HIST1H2BOP23527 126 aa10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 HIST1H2BBP33778 126 aa10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 HIST1H2BDP58876 126 aa10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 HIST1H2BCP62807 126 aa10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 HIST2H2BEQ16778 126 aa10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 CT83Q5H943 113 aa10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 HIST1H2BHQ93079 126 aa10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 BTF3L4Q96K17 158 aa10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 PGLYRP4Q96LB8 373 aa10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 HIST1H2BNQ99877 126 aa10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 HIST1H2BMQ99879 126 aa10.51□□□□□ -0.73
HMGCS2-201ENST00000369406 FBLL1A6NHQ2 334 aaKnown RBP10.5□□□□□ -0.73
HMGCS2-201ENST00000369406 M0QZ24 198 aa10.5□□□□□ -0.73
HMGCS2-201ENST00000369406 PDZD11Q5EBL8 140 aa10.5□□□□□ -0.73
HMGCS2-201ENST00000369406 TRGC1P0CF51 173 aa10.5□□□□□ -0.73
HMGCS2-201ENST00000369406 ID1P41134 155 aa10.5□□□□□ -0.73
HMGCS2-201ENST00000369406 OR10J6PQ8NGY7 276 aa10.5□□□□□ -0.73
HMGCS2-201ENST00000369406 NAT8BQ9UHF3 227 aa10.5□□□□□ -0.73
HMGCS2-201ENST00000369406 LBHQ53QV2 105 aaPredicted RBP10.49□□□□□ -0.73
HMGCS2-201ENST00000369406 GFI1BQ5VTD9 330 aa10.49□□□□□ -0.73
HMGCS2-201ENST00000369406 OR4B1Q8NGF8 309 aa10.49□□□□□ -0.73
HMGCS2-201ENST00000369406 DYNLRB2Q8TF09 96 aa10.49□□□□□ -0.73
HMGCS2-201ENST00000369406 TRAV9-1A0A075B6T8 112 aa10.49□□□□□ -0.73
HMGCS2-201ENST00000369406 IGKV3D-20A0A0C4DH25 116 aa10.49□□□□□ -0.73
HMGCS2-201ENST00000369406 A8MWL6 223 aa10.49□□□□□ -0.73
HMGCS2-201ENST00000369406 IGKV3-20P01619 116 aa10.49□□□□□ -0.73
HMGCS2-201ENST00000369406 TMEM136Q6ZRR5 245 aa10.49□□□□□ -0.73
HMGCS2-201ENST00000369406 NDFIP1Q9BT67 221 aa10.49□□□□□ -0.73
HMGCS2-201ENST00000369406 PKD1L1Q8TDX9 2849 aa10.49□□□□□ -0.73
HMGCS2-201ENST00000369406 MUC21A0A0G2JKD1 596 aa10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 A0A0J9YX75 114 aa10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 MUC21A0A140T8X8 626 aa10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 A0A1B0GXF2 115 aa10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 NUTF2P61970 127 aaKnown RBP10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 MUC21Q5SSG8 566 aa10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 LINC00477Q96M19 166 aa10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 ZNF256Q9Y2P7 627 aaPredicted RBP10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 GRIFINA4D1Z8 144 aa10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 TMEM189A5PLL7 270 aa10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 KNCNA6PVL3 124 aa10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 G0S2P27469 103 aa10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 RBPMS2Q6ZRY4 209 aaKnown RBP10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 NDUFA11Q86Y39 141 aa10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 TRAPPC1Q9Y5R8 145 aa10.48□□□□□ -0.73
HMGCS2-201ENST00000369406 HIST3H2BBQ8N257 126 aa10.47□□□□□ -0.73
HMGCS2-201ENST00000369406 A0A1B0GUS0 222 aa10.47□□□□□ -0.73
HMGCS2-201ENST00000369406 SNURFLB1AK76 121 aa10.47□□□□□ -0.73
HMGCS2-201ENST00000369406 ARMS2P0C7Q2 107 aa10.47□□□□□ -0.73
HMGCS2-201ENST00000369406 DEFB131AP59861 70 aa10.47□□□□□ -0.73
HMGCS2-201ENST00000369406 SNRPD3P62318 126 aaKnown RBP10.47□□□□□ -0.73
HMGCS2-201ENST00000369406 DNLZQ5SXM8 178 aa10.47□□□□□ -0.73
HMGCS2-201ENST00000369406 SSBP4Q9BWG4 385 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms