RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 A8MTW9 85 aa6.57□□□□□ -1.36
SNX27-201ENST00000368838 K7EQG2 157 aa6.57□□□□□ -1.36
SNX27-201ENST00000368838 M0R3E3 92 aa6.57□□□□□ -1.36
SNX27-201ENST00000368838 SCO1O75880 301 aa6.57□□□□□ -1.36
SNX27-201ENST00000368838 MALP21145 153 aa6.57□□□□□ -1.36
SNX27-201ENST00000368838 RPL19P84098 196 aaKnown RBP6.57□□□□□ -1.36
SNX27-201ENST00000368838 RASL11AQ6T310 242 aa6.57□□□□□ -1.36
SNX27-201ENST00000368838 GOLT1AQ6ZVE7 132 aa6.57□□□□□ -1.36
SNX27-201ENST00000368838 TCF24Q7RTU0 167 aa6.57□□□□□ -1.36
SNX27-201ENST00000368838 V9GYV3 84 aa6.57□□□□□ -1.36
SNX27-201ENST00000368838 SMIM27A0A1W2PRY6 76 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 CSN3P07498 182 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 CXCL1P09341 107 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 CRISP2P16562 243 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 S100PP25815 95 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 CMC4P56277 68 aaPredicted RBP6.56□□□□□ -1.36
SNX27-201ENST00000368838 SYNJ2BPP57105 145 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 GNG5P63218 68 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 PAFAH1B2P68402 229 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 IBA57Q5T440 356 aaKnown RBP6.56□□□□□ -1.36
SNX27-201ENST00000368838 C9orf66Q5T8R8 295 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 KCNIP4Q6PIL6 250 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 ADAMTSL5Q6ZMM2 481 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 FAM19A4Q96LR4 140 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 LINC00479Q96M42 142 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 C1orf43Q9BWL3 253 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 IL36BQ9NZH7 164 aa6.56□□□□□ -1.36
SNX27-201ENST00000368838 RYR2Q92736 4967 aa6.55□□□□□ -1.36
SNX27-201ENST00000368838 ZNF138P52744 262 aa6.55□□□□□ -1.36
SNX27-201ENST00000368838 ERVFC1-1P60608 527 aa6.55□□□□□ -1.36
SNX27-201ENST00000368838 TMEM88Q6PEY1 159 aa6.55□□□□□ -1.36
SNX27-201ENST00000368838 CBLN2Q8IUK8 224 aa6.55□□□□□ -1.36
SNX27-201ENST00000368838 DLX4Q92988 240 aaPredicted RBP6.55□□□□□ -1.36
SNX27-201ENST00000368838 SPAG8Q99932 426 aaPredicted RBP6.55□□□□□ -1.36
SNX27-201ENST00000368838 NDFIP1Q9BT67 221 aa6.55□□□□□ -1.36
SNX27-201ENST00000368838 IGHV3OR16-8A0A075B7F1 116 aa6.54□□□□□ -1.36
SNX27-201ENST00000368838 A8MWL6 223 aa6.54□□□□□ -1.36
SNX27-201ENST00000368838 H3BTX0 84 aa6.54□□□□□ -1.36
SNX27-201ENST00000368838 ZNF207O43670 478 aaKnown RBP6.54□□□□□ -1.36
SNX27-201ENST00000368838 RAB5AP20339 215 aa6.54□□□□□ -1.36
SNX27-201ENST00000368838 SLURP1P55000 103 aa6.54□□□□□ -1.36
SNX27-201ENST00000368838 FAM3BP58499 235 aaPredicted RBP6.54□□□□□ -1.36
SNX27-201ENST00000368838 SNRPD3P62318 126 aaKnown RBP6.54□□□□□ -1.36
SNX27-201ENST00000368838 DEFB114Q30KQ6 69 aa6.54□□□□□ -1.36
SNX27-201ENST00000368838 Q6AWC8 147 aa6.54□□□□□ -1.36
SNX27-201ENST00000368838 NUDT10Q8NFP7 164 aa6.54□□□□□ -1.36
SNX27-201ENST00000368838 TSKUQ8WUA8 353 aa6.54□□□□□ -1.36
SNX27-201ENST00000368838 NUDT11Q96G61 164 aa6.54□□□□□ -1.36
SNX27-201ENST00000368838 SRD5A3Q9H8P0 318 aa6.54□□□□□ -1.36
SNX27-201ENST00000368838 ZNF256Q9Y2P7 627 aaPredicted RBP6.54□□□□□ -1.36
SNX27-201ENST00000368838 TENM2Q9NT68 2774 aa6.54□□□□□ -1.36
SNX27-201ENST00000368838 SACSQ9NZJ4 4579 aa6.54□□□□□ -1.36
SNX27-201ENST00000368838 IGHV3OR16-13A0A075B7E8 117 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 TRAV8-1A0A0A6YYK1 113 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 IGHV3-74A0A0B4J1X5 117 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 TRAV34A0A0B4J273 112 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 UBE2CO00762 179 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 CT45A10P0DMU9 189 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 INSL3P51460 131 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 RPS20P60866 119 aaKnown RBP6.53□□□□□ -1.36
SNX27-201ENST00000368838 HIST1H1AQ02539 215 aaPredicted RBP6.53□□□□□ -1.36
SNX27-201ENST00000368838 SMUG1Q53HV7 270 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 TMEM78Q5T7P6 136 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 ATP5L2Q7Z4Y8 100 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 FAM24BQ8N5W8 94 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 OR8A1Q8NGG7 326 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 AGPAT4-IT1Q9H0P7 198 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 MS4A6AQ9H2W1 248 aa6.53□□□□□ -1.36
SNX27-201ENST00000368838 IGHV3-49A0A0A0MS15 119 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 IGHV3-66A0A0C4DH42 116 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 XKRY2A2RUG3 117 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 OR4C46A6NHA9 309 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 FABP5P3A8MUU1 101 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 GATCO43716 136 aaKnown RBP6.52□□□□□ -1.37
SNX27-201ENST00000368838 SAP30O75446 220 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 DUSP14O95147 198 aaKnown RBP6.52□□□□□ -1.37
SNX27-201ENST00000368838 IGLV1-51P01701 117 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 P01737 135 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 MT-ND6P03923 174 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 SNRPCP09234 159 aaKnown RBP6.52□□□□□ -1.37
SNX27-201ENST00000368838 NHLRC4P0CG21 123 aaPredicted RBP6.52□□□□□ -1.37
SNX27-201ENST00000368838 CRIP1P50238 77 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 OR5I1Q13606 314 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 DNLZQ5SXM8 178 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 FAM162BQ5T6X4 162 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 FOXI2Q6ZQN5 318 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 PRNTQ86SH4 94 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 GBGT1Q8N5D6 347 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 GATD1Q8NB37 220 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 OR10J6PQ8NGY7 276 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 ZC2HC1AQ96GY0 325 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 FAM210BQ96KR6 192 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 CNFNQ9BYD5 112 aa6.52□□□□□ -1.37
SNX27-201ENST00000368838 RPP21Q9H633 154 aaKnown RBP6.52□□□□□ -1.37
SNX27-201ENST00000368838 A0A0J9YX75 114 aa6.51□□□□□ -1.37
SNX27-201ENST00000368838 A0A1B0GW15 77 aa6.51□□□□□ -1.37
SNX27-201ENST00000368838 KLLNB2CW77 178 aa6.51□□□□□ -1.37
SNX27-201ENST00000368838 PRAC2D3DTV9 90 aa6.51□□□□□ -1.37
SNX27-201ENST00000368838 LINC00322Q6ZN03 302 aaPredicted RBP6.51□□□□□ -1.37
SNX27-201ENST00000368838 SBSPONQ8IVN8 264 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms