RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 PGPA6NDG6 321 aa13.61□□□□□ -0.23
LMNA-204ENST00000368298 CXCL1P09341 107 aa13.61□□□□□ -0.23
LMNA-204ENST00000368298 GNG4P50150 75 aa13.61□□□□□ -0.23
LMNA-204ENST00000368298 TGIF2-C20orf24A0A0A6YYL0 155 aa13.61□□□□□ -0.23
LMNA-204ENST00000368298 PPP1R2P9O14990 202 aa13.61□□□□□ -0.23
LMNA-204ENST00000368298 IGKV3-20P01619 116 aa13.61□□□□□ -0.23
LMNA-204ENST00000368298 ZNF705DP0CH99 300 aaPredicted RBP13.61□□□□□ -0.23
LMNA-204ENST00000368298 ZNF705BP0CI00 300 aaPredicted RBP13.61□□□□□ -0.23
LMNA-204ENST00000368298 EXOC3-AS1Q8N2X6 119 aa13.61□□□□□ -0.23
LMNA-204ENST00000368298 Q9H3A6 140 aa13.61□□□□□ -0.23
LMNA-204ENST00000368298 C1orf196B1AJZ1 125 aa13.6□□□□□ -0.23
LMNA-204ENST00000368298 PRAC2D3DTV9 90 aa13.6□□□□□ -0.23
LMNA-204ENST00000368298 M0R3E3 92 aa13.6□□□□□ -0.23
LMNA-204ENST00000368298 TAS2R60P59551 318 aa13.6□□□□□ -0.23
LMNA-204ENST00000368298 GNG5P63218 68 aa13.6□□□□□ -0.23
LMNA-204ENST00000368298 FLI1Q01543 452 aaPredicted RBP13.6□□□□□ -0.23
LMNA-204ENST00000368298 SFRP2Q96HF1 295 aa13.6□□□□□ -0.23
LMNA-204ENST00000368298 IGF2BP2-AS1Q96M15 143 aa13.6□□□□□ -0.23
LMNA-204ENST00000368298 EDA2RQ9HAV5 297 aa13.6□□□□□ -0.23
LMNA-204ENST00000368298 OTORQ9NRC9 128 aa13.6□□□□□ -0.23
LMNA-204ENST00000368298 EPDR1Q9UM22 224 aa13.6□□□□□ -0.23
LMNA-204ENST00000368298 K7EN84 100 aa13.59□□□□□ -0.23
LMNA-204ENST00000368298 S100PP25815 95 aa13.59□□□□□ -0.23
LMNA-204ENST00000368298 HIST1H1AQ02539 215 aaPredicted RBP13.59□□□□□ -0.23
LMNA-204ENST00000368298 OR10J6PQ8NGY7 276 aa13.59□□□□□ -0.23
LMNA-204ENST00000368298 WWC2-AS2Q96NR7 200 aa13.59□□□□□ -0.23
LMNA-204ENST00000368298 XCL2Q9UBD3 114 aa13.59□□□□□ -0.23
LMNA-204ENST00000368298 NPIPB6E9PJ23 425 aa13.58□□□□□ -0.24
LMNA-204ENST00000368298 AMBPP02760 352 aa13.58□□□□□ -0.24
LMNA-204ENST00000368298 PFN1P07737 140 aaKnown RBP13.58□□□□□ -0.24
LMNA-204ENST00000368298 RAB5BP61020 215 aa13.58□□□□□ -0.24
LMNA-204ENST00000368298 ARL6IP6Q8N6S5 226 aa13.58□□□□□ -0.24
LMNA-204ENST00000368298 C5orf17Q8NAS9 161 aa13.58□□□□□ -0.24
LMNA-204ENST00000368298 OR10G8Q8NGN5 311 aa13.58□□□□□ -0.24
LMNA-204ENST00000368298 RPH3ALQ9UNE2 315 aa13.58□□□□□ -0.24
LMNA-204ENST00000368298 RPS10P46783 165 aaKnown RBP13.57□□□□□ -0.24
LMNA-204ENST00000368298 ZFP82Q8N141 532 aa13.57□□□□□ -0.24
LMNA-204ENST00000368298 OR11H2Q8NH07 326 aa13.57□□□□□ -0.24
LMNA-204ENST00000368298 FAM210BQ96KR6 192 aa13.57□□□□□ -0.24
LMNA-204ENST00000368298 LINC00479Q96M42 142 aa13.57□□□□□ -0.24
LMNA-204ENST00000368298 TRBV24-1A0A075B6N3 115 aa13.56□□□□□ -0.24
LMNA-204ENST00000368298 TRAV34A0A0B4J273 112 aa13.56□□□□□ -0.24
LMNA-204ENST00000368298 ODF3Q96PU9 254 aa13.56□□□□□ -0.24
LMNA-204ENST00000368298 ATG101Q9BSB4 218 aa13.56□□□□□ -0.24
LMNA-204ENST00000368298 CRXO43186 299 aaPredicted RBP13.55□□□□□ -0.24
LMNA-204ENST00000368298 IGLV2-8P01709 118 aa13.55□□□□□ -0.24
LMNA-204ENST00000368298 FXYD7P58549 80 aa13.55□□□□□ -0.24
LMNA-204ENST00000368298 OR5I1Q13606 314 aa13.55□□□□□ -0.24
LMNA-204ENST00000368298 TMEM183BQ1AE95 376 aa13.55□□□□□ -0.24
LMNA-204ENST00000368298 ZNF705AQ6ZN79 300 aaPredicted RBP13.55□□□□□ -0.24
LMNA-204ENST00000368298 C9orf47Q6ZRZ4 202 aa13.55□□□□□ -0.24
LMNA-204ENST00000368298 GCGP01275 180 aa13.55□□□□□ -0.24
LMNA-204ENST00000368298 S100A9P06702 114 aaKnown RBP13.55□□□□□ -0.24
LMNA-204ENST00000368298 PRB4P10163 310 aaPredicted RBP13.55□□□□□ -0.24
LMNA-204ENST00000368298 UBE2G1P62253 170 aa13.55□□□□□ -0.24
LMNA-204ENST00000368298 KCNIP4Q6PIL6 250 aa13.55□□□□□ -0.24
LMNA-204ENST00000368298 LINC00477Q96M19 166 aa13.55□□□□□ -0.24
LMNA-204ENST00000368298 NEU1Q99519 415 aa13.55□□□□□ -0.24
LMNA-204ENST00000368298 PYGO2Q9BRQ0 406 aa13.55□□□□□ -0.24
LMNA-204ENST00000368298 X6R8D5 127 aa13.55□□□□□ -0.24
LMNA-204ENST00000368298 RBAKDNA6NC62 111 aa13.54□□□□□ -0.24
LMNA-204ENST00000368298 M0R2Z0 102 aa13.54□□□□□ -0.24
LMNA-204ENST00000368298 TCRAP04437 139 aa13.54□□□□□ -0.24
LMNA-204ENST00000368298 MGST1P10620 155 aaKnown RBP13.54□□□□□ -0.24
LMNA-204ENST00000368298 CSN1S1P47710 185 aa13.54□□□□□ -0.24
LMNA-204ENST00000368298 SPINK13Q1W4C9 94 aa13.54□□□□□ -0.24
LMNA-204ENST00000368298 BAGE2Q86Y30 109 aa13.54□□□□□ -0.24
LMNA-204ENST00000368298 CMTM2Q8TAZ6 248 aa13.54□□□□□ -0.24
LMNA-204ENST00000368298 IMMP2LQ96T52 175 aa13.54□□□□□ -0.24
LMNA-204ENST00000368298 KLF12Q9Y4X4 402 aa13.54□□□□□ -0.24
LMNA-204ENST00000368298 CT45A10P0DMU9 189 aa13.53□□□□□ -0.24
LMNA-204ENST00000368298 CDKN1BP46527 198 aa13.53□□□□□ -0.24
LMNA-204ENST00000368298 ERVFC1-1P60608 527 aa13.53□□□□□ -0.24
LMNA-204ENST00000368298 C1orf158Q8N1D5 194 aa13.53□□□□□ -0.24
LMNA-204ENST00000368298 FMC1Q96HJ9 113 aa13.53□□□□□ -0.24
LMNA-204ENST00000368298 FAM19A4Q96LR4 140 aa13.53□□□□□ -0.24
LMNA-204ENST00000368298 AGPAT4-IT1Q9H0P7 198 aa13.53□□□□□ -0.24
LMNA-204ENST00000368298 OSTCQ9NRP0 149 aa13.53□□□□□ -0.24
LMNA-204ENST00000368298 PPP1R14DQ9NXH3 145 aa13.53□□□□□ -0.24
LMNA-204ENST00000368298 A0A1W2PPQ1 181 aa13.52□□□□□ -0.25
LMNA-204ENST00000368298 DIRC3C9JPN6 131 aa13.52□□□□□ -0.25
LMNA-204ENST00000368298 MIFP14174 115 aa13.52□□□□□ -0.25
LMNA-204ENST00000368298 TSPOP30536 169 aa13.52□□□□□ -0.25
LMNA-204ENST00000368298 Q8NAQ8 132 aa13.52□□□□□ -0.25
LMNA-204ENST00000368298 NHLRC2Q8NBF2 726 aa13.52□□□□□ -0.25
LMNA-204ENST00000368298 C11orf68Q9H3H3 251 aaKnown RBP13.52□□□□□ -0.25
LMNA-204ENST00000368298 SMIM9A6NGZ8 99 aa13.51□□□□□ -0.25
LMNA-204ENST00000368298 ERCC8Q13216 396 aa13.51□□□□□ -0.25
LMNA-204ENST00000368298 IGKV2-40A0A087WW87 121 aaPredicted RBP13.5□□□□□ -0.25
LMNA-204ENST00000368298 TRBV7-9A0A0J9YWB2 115 aa13.5□□□□□ -0.25
LMNA-204ENST00000368298 A0A0J9YWU9 116 aa13.5□□□□□ -0.25
LMNA-204ENST00000368298 IGKV2D-40P01614 121 aaPredicted RBP13.5□□□□□ -0.25
LMNA-204ENST00000368298 FAM3BP58499 235 aaPredicted RBP13.5□□□□□ -0.25
LMNA-204ENST00000368298 GOLT1AQ6ZVE7 132 aa13.5□□□□□ -0.25
LMNA-204ENST00000368298 SGK494Q96LW2 274 aa13.5□□□□□ -0.25
LMNA-204ENST00000368298 VGLL1Q99990 258 aa13.5□□□□□ -0.25
LMNA-204ENST00000368298 C20orf144Q9BQM9 153 aa13.5□□□□□ -0.25
LMNA-204ENST00000368298 RNASE7Q9H1E1 156 aaKnown RBP13.5□□□□□ -0.25
LMNA-204ENST00000368298 IL36BQ9NZH7 164 aa13.5□□□□□ -0.25
LMNA-204ENST00000368298 ZNF492Q9P255 531 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms