RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 PDE6HQ13956 83 aa10.6□□□□□ -0.71
PTPRK-204ENST00000368210 AMN1Q8IY45 258 aa10.6□□□□□ -0.71
PTPRK-204ENST00000368210 CYYR1Q96J86 154 aa10.6□□□□□ -0.71
PTPRK-204ENST00000368210 COL4A4P53420 1690 aaPredicted RBP10.6□□□□□ -0.71
PTPRK-204ENST00000368210 SRRM4A7MD48 611 aaKnown RBP10.6□□□□□ -0.71
PTPRK-204ENST00000368210 WFDC2Q14508 124 aa10.6□□□□□ -0.71
PTPRK-204ENST00000368210 VWC2Q2TAL6 325 aa10.6□□□□□ -0.71
PTPRK-204ENST00000368210 STHQ8IWL8 128 aa10.6□□□□□ -0.71
PTPRK-204ENST00000368210 FXYD7P58549 80 aa10.59□□□□□ -0.71
PTPRK-204ENST00000368210 TMEM258P61165 79 aa10.59□□□□□ -0.71
PTPRK-204ENST00000368210 TPSG1Q9NRR2 321 aa10.59□□□□□ -0.71
PTPRK-204ENST00000368210 FOXI1Q12951 378 aa10.59□□□□□ -0.71
PTPRK-204ENST00000368210 DIAPH2-AS1Q14236 149 aa10.59□□□□□ -0.71
PTPRK-204ENST00000368210 TMEM158Q8WZ71 300 aa10.59□□□□□ -0.71
PTPRK-204ENST00000368210 SMIM27A0A1W2PRY6 76 aa10.59□□□□□ -0.71
PTPRK-204ENST00000368210 TEN1Q86WV5 123 aa10.59□□□□□ -0.71
PTPRK-204ENST00000368210 TRGV2A0A075B6R0 118 aa10.59□□□□□ -0.71
PTPRK-204ENST00000368210 FAM223BA6NKX1 122 aa10.59□□□□□ -0.71
PTPRK-204ENST00000368210 NDUFB8O95169 186 aa10.59□□□□□ -0.71
PTPRK-204ENST00000368210 GHRHP01286 108 aa10.59□□□□□ -0.71
PTPRK-204ENST00000368210 FAM223AQ8IWN6 122 aa10.59□□□□□ -0.71
PTPRK-204ENST00000368210 ATP6V0E1O15342 81 aa10.58□□□□□ -0.72
PTPRK-204ENST00000368210 OVOL2Q9BRP0 275 aa10.58□□□□□ -0.72
PTPRK-204ENST00000368210 IGLL5B9A064 214 aa10.58□□□□□ -0.72
PTPRK-204ENST00000368210 SLC25A16P16260 332 aa10.58□□□□□ -0.72
PTPRK-204ENST00000368210 IGF2-ASQ6U949 168 aa10.58□□□□□ -0.72
PTPRK-204ENST00000368210 FAM231DQ6ZW35 169 aa10.58□□□□□ -0.72
PTPRK-204ENST00000368210 NTN5Q8WTR8 489 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-204ENST00000368210 LINC00477Q96M19 166 aa10.58□□□□□ -0.72
PTPRK-204ENST00000368210 NPYP01303 97 aa10.58□□□□□ -0.72
PTPRK-204ENST00000368210 KLF5Q13887 457 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-204ENST00000368210 GOLGB1Q14789 3259 aaKnown RBP10.58□□□□□ -0.72
PTPRK-204ENST00000368210 TRGV11A0A075B6L2 103 aa10.57□□□□□ -0.72
PTPRK-204ENST00000368210 FAM110DQ8TAY7 271 aaPredicted RBP10.57□□□□□ -0.72
PTPRK-204ENST00000368210 SCRT2Q9NQ03 307 aa10.57□□□□□ -0.72
PTPRK-204ENST00000368210 MSMBP08118 114 aa10.57□□□□□ -0.72
PTPRK-204ENST00000368210 ZNF114Q8NC26 417 aa10.57□□□□□ -0.72
PTPRK-204ENST00000368210 ATP6V0E2Q8NHE4 81 aa10.57□□□□□ -0.72
PTPRK-204ENST00000368210 RHPN1-AS1Q9BWJ2 59 aa10.57□□□□□ -0.72
PTPRK-204ENST00000368210 PRR14LQ5THK1 2151 aa10.57□□□□□ -0.72
PTPRK-204ENST00000368210 IGHG4P01861 327 aa10.57□□□□□ -0.72
PTPRK-204ENST00000368210 TCF15Q12870 199 aa10.57□□□□□ -0.72
PTPRK-204ENST00000368210 RUSC1-AS1Q66K80 236 aa10.57□□□□□ -0.72
PTPRK-204ENST00000368210 MYMXA0A1B0GTQ4 84 aa10.57□□□□□ -0.72
PTPRK-204ENST00000368210 PRO1854Q9UHT4 67 aa10.57□□□□□ -0.72
PTPRK-204ENST00000368210 PIP4P2Q8N4L2 257 aa10.56□□□□□ -0.72
PTPRK-204ENST00000368210 HLA-DMBP28068 263 aa10.56□□□□□ -0.72
PTPRK-204ENST00000368210 OVOL3O00110 214 aa10.56□□□□□ -0.72
PTPRK-204ENST00000368210 LINC01356Q8N9X3 169 aa10.56□□□□□ -0.72
PTPRK-204ENST00000368210 CTSZQ9UBR2 303 aa10.56□□□□□ -0.72
PTPRK-204ENST00000368210 SHISA9B4DS77 424 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 G3V318 75 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 ACYP1P07311 99 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 NEGR1Q7Z3B1 354 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 ZNF492Q9P255 531 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 TRBV19A0A075B6N1 114 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 LHBP01229 141 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 MRPL23Q16540 153 aaKnown RBP10.55□□□□□ -0.72
PTPRK-204ENST00000368210 SPRNQ5BIV9 151 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 DENND4AQ7Z401 1863 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 IGHV1-69DA0A0B4J2H0 117 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 IGHV1-69P01742 117 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 SYNJ2BPP57105 145 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 PRR20EP86478 221 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 PRR20CP86479 221 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 PRR20DP86480 221 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 PRR20BP86481 221 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 PRR20AP86496 221 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
PTPRK-204ENST00000368210 WDR87Q6ZQQ6 2873 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 FGF6P10767 208 aa10.55□□□□□ -0.72
PTPRK-204ENST00000368210 PCNX3Q9H6A9 2034 aa10.54□□□□□ -0.72
PTPRK-204ENST00000368210 WIPF2Q8TF74 440 aaPredicted RBP10.54□□□□□ -0.72
PTPRK-204ENST00000368210 C11orf52Q96A22 123 aa10.54□□□□□ -0.72
PTPRK-204ENST00000368210 CSPG4Q6UVK1 2322 aa10.54□□□□□ -0.72
PTPRK-204ENST00000368210 ARMS2P0C7Q2 107 aa10.54□□□□□ -0.72
PTPRK-204ENST00000368210 ZNF747Q9BV97 191 aa10.53□□□□□ -0.72
PTPRK-204ENST00000368210 KIAA1549LQ6ZVL6 1849 aa10.53□□□□□ -0.72
PTPRK-204ENST00000368210 GRNP28799 593 aaKnown RBP10.53□□□□□ -0.72
PTPRK-204ENST00000368210 ERCC8Q13216 396 aa10.53□□□□□ -0.72
PTPRK-204ENST00000368210 GATA3P23771 443 aa10.53□□□□□ -0.72
PTPRK-204ENST00000368210 ADAMTS9Q9P2N4 1935 aa10.53□□□□□ -0.72
PTPRK-204ENST00000368210 ATOX1O00244 68 aa10.53□□□□□ -0.72
PTPRK-204ENST00000368210 TMEM75Q8N9X5 138 aa10.53□□□□□ -0.72
PTPRK-204ENST00000368210 Q6ZUT4 128 aa10.52□□□□□ -0.72
PTPRK-204ENST00000368210 C8orf31Q8N9H6 132 aa10.52□□□□□ -0.72
PTPRK-204ENST00000368210 DPH3P1Q9H4G8 78 aa10.52□□□□□ -0.72
PTPRK-204ENST00000368210 RBM3P98179 157 aaKnown RBP10.52□□□□□ -0.73
PTPRK-204ENST00000368210 DNAJC30Q96LL9 226 aa10.52□□□□□ -0.73
PTPRK-204ENST00000368210 THAP8Q8NA92 274 aa10.52□□□□□ -0.73
PTPRK-204ENST00000368210 C14orf178Q8N769 122 aaPredicted RBP10.51□□□□□ -0.73
PTPRK-204ENST00000368210 NDUFV3P56181 108 aaKnown RBP10.51□□□□□ -0.73
PTPRK-204ENST00000368210 TOMM7Q9P0U1 55 aa10.51□□□□□ -0.73
PTPRK-204ENST00000368210 RNF223E7ERA6 249 aa10.51□□□□□ -0.73
PTPRK-204ENST00000368210 LINC01545Q5VT33 79 aa10.51□□□□□ -0.73
PTPRK-204ENST00000368210 SEM1Q6ZVN7 128 aa10.51□□□□□ -0.73
PTPRK-204ENST00000368210 TMEM131Q92545 1883 aa10.51□□□□□ -0.73
PTPRK-204ENST00000368210 PIEZO1Q92508 2521 aa10.51□□□□□ -0.73
PTPRK-204ENST00000368210 FAM236AA0A1B0GUQ0 79 aa10.51□□□□□ -0.73
PTPRK-204ENST00000368210 FAM236BA0A1B0GV22 79 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms