RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 SLC25A16P16260 332 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 COA6Q5JTJ3 125 aaKnown RBP5.91□□□□□ -1.46
SYNE1-208ENST00000367256 WIPF2Q8TF74 440 aaPredicted RBP5.91□□□□□ -1.46
SYNE1-208ENST00000367256 RMI2Q96E14 147 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 TRAV26-2A0A0B4J265 109 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 C22orf46C9J442 243 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 GGNQ86UU5 652 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 IGHV3-16A0A0C4DH30 117 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 TMEM213A2RRL7 107 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 GAGE12JA6NER3 117 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 GAGE4Q13068 117 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 GAGE5Q13069 117 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 GAGE6Q13070 117 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 FOXL2NBQ6ZUU3 175 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 SPACA3Q8IXA5 215 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 HS3ST6Q96QI5 342 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 TMEM14CQ9P0S9 112 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 KLF2Q9Y5W3 355 aaPredicted RBP5.91□□□□□ -1.46
SYNE1-208ENST00000367256 LINC01356Q8N9X3 169 aa5.91□□□□□ -1.46
SYNE1-208ENST00000367256 RNASE2P10153 161 aaKnown RBP5.9□□□□□ -1.46
SYNE1-208ENST00000367256 FGF6P10767 208 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 LY6DQ14210 128 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 KIR2DL5BA0A0G2JN68 375 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 KIR2DL5BA0A0G2JPC4 375 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 KLF5Q13887 457 aaPredicted RBP5.9□□□□□ -1.46
SYNE1-208ENST00000367256 ANXA2RQ3ZCQ2 193 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 KIR2DL5AQ8N109 375 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 PINLYPA6NC86 204 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 J3KT08 172 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 VWC2Q2TAL6 325 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 Q6ZWC4 215 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 TMEM243Q9BU79 118 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 CHKB-CPT1BH3BT56 60 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 LHBP01229 141 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 AZU1P20160 251 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 NBL1P41271 181 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 GAGE7O76087 117 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 ACYP1P07311 99 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 GAGE12FP0CL80 117 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 GAGE12GP0CL81 117 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 GAGE12IP0CL82 117 aa5.9□□□□□ -1.46
SYNE1-208ENST00000367256 RBM3P98179 157 aaKnown RBP5.9□□□□□ -1.46
SYNE1-208ENST00000367256 TTC28Q96AY4 2481 aa5.9□□□□□ -1.47
SYNE1-208ENST00000367256 CGB7P0DN87 165 aa5.9□□□□□ -1.47
SYNE1-208ENST00000367256 C2orf66Q6UXQ4 117 aa5.9□□□□□ -1.47
SYNE1-208ENST00000367256 NDUFA12Q9UI09 145 aa5.9□□□□□ -1.47
SYNE1-208ENST00000367256 OTOGLQ3ZCN5 2332 aa5.9□□□□□ -1.47
SYNE1-208ENST00000367256 OVOL3O00110 214 aa5.9□□□□□ -1.47
SYNE1-208ENST00000367256 SYNJ2BPP57105 145 aa5.9□□□□□ -1.47
SYNE1-208ENST00000367256 A0A1B0GUS0 222 aa5.9□□□□□ -1.47
SYNE1-208ENST00000367256 PRB1P04280 392 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 A0A1W2PPI3 338 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 SAA4P35542 130 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 PRO1854Q9UHT4 67 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 IGHG2P01859 326 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 PRDM6Q9NQX0 595 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 BVES-AS1Q5T3Y7 98 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 LYPD6BQ8NI32 183 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 F8VRH5 84 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 PSPNO60542 156 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 V9GYY9 64 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 TINCRA0A1B0GVN0 87 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 HLA-DRB4P13762 266 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 HERVK_113P63121 156 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 ANKRD29Q8N6D5 301 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 HLA-DRB4X5D2U9 266 aa5.89□□□□□ -1.47
SYNE1-208ENST00000367256 SDHAF1A6NFY7 115 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 IGKV1-16P04430 117 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 CFHR4Q92496 578 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 PYGO2Q9BRQ0 406 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 LINC01619G3V211 115 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 NPSP0C0P6 89 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 GATA4P43694 442 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 ZNF134P52741 427 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 SPINK13Q1W4C9 94 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 MRPL51Q4U2R6 128 aaKnown RBP5.88□□□□□ -1.47
SYNE1-208ENST00000367256 XCL2Q9UBD3 114 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 NXPH4O95158 308 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 PAX9P55771 341 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 APOC4P55056 127 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 IGKV1D-17A0A075B6S4 117 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 ETDBQ3ZM63 59 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 V9GYV3 84 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 E9PQ18 207 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 LINC00479Q96M42 142 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 C20orf78Q9BR46 151 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 ORMDL1Q9P0S3 153 aa5.88□□□□□ -1.47
SYNE1-208ENST00000367256 C9JQL5 133 aa5.87□□□□□ -1.47
SYNE1-208ENST00000367256 CRYGCP07315 174 aa5.87□□□□□ -1.47
SYNE1-208ENST00000367256 C15orf53Q8NAA6 179 aa5.87□□□□□ -1.47
SYNE1-208ENST00000367256 KNCNA6PVL3 124 aa5.87□□□□□ -1.47
SYNE1-208ENST00000367256 C8orf86Q6ZUL3 223 aa5.87□□□□□ -1.47
SYNE1-208ENST00000367256 C3orf56Q8N813 242 aa5.87□□□□□ -1.47
SYNE1-208ENST00000367256 CLPSL2Q6UWE3 100 aa5.87□□□□□ -1.47
SYNE1-208ENST00000367256 H3BQ85 93 aa5.87□□□□□ -1.47
SYNE1-208ENST00000367256 IGHV2-70DA0A0C4DH43 119 aa5.87□□□□□ -1.47
SYNE1-208ENST00000367256 A0A0G2JNJ9 132 aa5.87□□□□□ -1.47
SYNE1-208ENST00000367256 Q9UFV3 132 aa5.87□□□□□ -1.47
SYNE1-208ENST00000367256 CYYR1Q96J86 154 aa5.87□□□□□ -1.47
SYNE1-208ENST00000367256 LMO1P25800 156 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms