RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 KIR3DS1Q14943 382 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 TRPT1Q86TN4 253 aaKnown RBP7.2□□□□□ -1.26
SYNE1-205ENST00000367251 TRBV25-1A0A075B6N4 114 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 LTAP01374 205 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 IGLC2P0DOY2 106 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 IGLC3P0DOY3 106 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 ZNF134P52741 427 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 C11orf53Q8IXP5 236 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 IGF2BP2-AS1Q96M15 143 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 CHAC1Q9BUX1 264 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 WT1-ASQ06250 92 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 A0A087X0K7 114 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 IGHV2-70DA0A0C4DH43 119 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 ANGP03950 147 aaKnown RBP7.19□□□□□ -1.26
SYNE1-205ENST00000367251 Q6ZWC4 215 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 H3BUA1 57 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 SIVA1O15304 175 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 NXPH4O95158 308 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 PFN2P35080 140 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 PIP4P1Q86T03 277 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 MRPL53Q96EL3 112 aaKnown RBP7.19□□□□□ -1.26
SYNE1-205ENST00000367251 NDUFA4O00483 81 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 ZC2HC1BQ5TFG8 222 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 DMRTC2Q8IXT2 367 aaPredicted RBP7.19□□□□□ -1.26
SYNE1-205ENST00000367251 LTBP2Q14767 1821 aa7.19□□□□□ -1.26
SYNE1-205ENST00000367251 hADV29S1A0JD25 119 aa7.18□□□□□ -1.26
SYNE1-205ENST00000367251 PRSS29PA6NIE9 313 aa7.18□□□□□ -1.26
SYNE1-205ENST00000367251 NEGR1Q7Z3B1 354 aa7.18□□□□□ -1.26
SYNE1-205ENST00000367251 PRR25Q96S07 402 aa7.18□□□□□ -1.26
SYNE1-205ENST00000367251 IGHV3-16A0A0C4DH30 117 aa7.18□□□□□ -1.26
SYNE1-205ENST00000367251 WNK1Q9H4A3 2382 aa7.18□□□□□ -1.26
SYNE1-205ENST00000367251 IGLC1P0CG04 106 aa7.18□□□□□ -1.26
SYNE1-205ENST00000367251 COL4A3Q01955 1670 aa7.18□□□□□ -1.26
SYNE1-205ENST00000367251 RBAKDNA6NC62 111 aa7.18□□□□□ -1.26
SYNE1-205ENST00000367251 K7EMI3 77 aa7.18□□□□□ -1.26
SYNE1-205ENST00000367251 RHODO00212 210 aa7.18□□□□□ -1.26
SYNE1-205ENST00000367251 FAM215AQ9Y5M1 114 aa7.18□□□□□ -1.26
SYNE1-205ENST00000367251 ATP6V0E1O15342 81 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 COX8AP10176 69 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 PMVKQ15126 192 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 C14orf178Q8N769 122 aaPredicted RBP7.17□□□□□ -1.26
SYNE1-205ENST00000367251 IL17DQ8TAD2 202 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 ZNF503Q96F45 646 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 DENND4CQ5VZ89 1909 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 IGHV1-69DA0A0B4J2H0 117 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 IGHV1-24A0A0C4DH33 117 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 A0A0J9YY99 117 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 MYMXA0A1B0GTQ4 84 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 IGHV1-69P01742 117 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 SLAQ13239 276 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 OR11H6Q8NGC7 330 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 HEATR5AQ86XA9 2040 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 A0A087WWL8 130 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 AZU1P20160 251 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 LY6G5BQ8NDX9 201 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 C8orf49Q96NF6 230 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 C1orf43Q9BWL3 253 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 SPANXA1Q9NS26 97 aa7.17□□□□□ -1.26
SYNE1-205ENST00000367251 CHKB-CPT1BH3BT56 60 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 GAGE6Q13070 117 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 MRPL51Q4U2R6 128 aaKnown RBP7.16□□□□□ -1.26
SYNE1-205ENST00000367251 GAGE2EQ4V326 116 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 FANCD2OSQ96PS1 177 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 GAGE2DQ9UEU5 116 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 TMEM213A2RRL7 107 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 PIFOQ8TCI5 191 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 FGF23Q9GZV9 251 aaPredicted RBP7.16□□□□□ -1.26
SYNE1-205ENST00000367251 LRRK1Q38SD2 2015 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 J3QLI3 93 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 TCTEX1D4Q5JR98 221 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 C20orf78Q9BR46 151 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 ZNRD1Q9P1U0 126 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 LENEPQ9Y5L5 61 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 C9orf118A6NHY6 69 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 K7EN84 100 aa7.16□□□□□ -1.26
SYNE1-205ENST00000367251 PRR30Q53SZ7 412 aaPredicted RBP7.15□□□□□ -1.26
SYNE1-205ENST00000367251 GPHB5Q86YW7 130 aa7.15□□□□□ -1.26
SYNE1-205ENST00000367251 SMKR1H3BMG3 65 aa7.15□□□□□ -1.26
SYNE1-205ENST00000367251 TIRAPP58753 221 aa7.15□□□□□ -1.26
SYNE1-205ENST00000367251 TIMM21Q9BVV7 248 aa7.15□□□□□ -1.26
SYNE1-205ENST00000367251 SPANXDQ9BXN6 97 aa7.15□□□□□ -1.26
SYNE1-205ENST00000367251 CCDC168Q8NDH2 2452 aa7.15□□□□□ -1.26
SYNE1-205ENST00000367251 MPDZO75970 2070 aa7.15□□□□□ -1.26
SYNE1-205ENST00000367251 SPINK13Q1W4C9 94 aa7.15□□□□□ -1.27
SYNE1-205ENST00000367251 DUX4L9Q6RFH8 374 aaPredicted RBP7.15□□□□□ -1.27
SYNE1-205ENST00000367251 CLPSL2Q6UWE3 100 aa7.15□□□□□ -1.27
SYNE1-205ENST00000367251 RNF183Q96D59 192 aa7.15□□□□□ -1.27
SYNE1-205ENST00000367251 TRBV20-1A0A075B6N2 111 aa7.15□□□□□ -1.27
SYNE1-205ENST00000367251 RPL18AQ02543 176 aaKnown RBP7.15□□□□□ -1.27
SYNE1-205ENST00000367251 C8orf86Q6ZUL3 223 aa7.15□□□□□ -1.27
SYNE1-205ENST00000367251 SPXQ9BT56 116 aa7.15□□□□□ -1.27
SYNE1-205ENST00000367251 IGLC7A0M8Q6 106 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 MYO18BQ8IUG5 2567 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 OBSL1O75147 1896 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 ZC2HC1AQ96GY0 325 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 ANAPC13Q9BS18 74 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 PRB1P04280 392 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 IGFL4Q6B9Z1 124 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 I3L3M4 83 aa7.14□□□□□ -1.27
SYNE1-205ENST00000367251 C2orf66Q6UXQ4 117 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms