RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 OR4F17Q8NGA8 305 aa9.34□□□□□ -0.91
CAPN9-203ENST00000366666 TCL1AP56279 114 aa9.34□□□□□ -0.91
CAPN9-203ENST00000366666 KLF5Q13887 457 aaPredicted RBP9.34□□□□□ -0.91
CAPN9-203ENST00000366666 MRPL54Q6P161 138 aaKnown RBP9.34□□□□□ -0.91
CAPN9-203ENST00000366666 KLHL30-AS1Q8NEE0 82 aa9.34□□□□□ -0.91
CAPN9-203ENST00000366666 GRAMD2BQ96HH9 432 aa9.34□□□□□ -0.91
CAPN9-203ENST00000366666 FAM167A-AS1Q96KT0 104 aa9.34□□□□□ -0.91
CAPN9-203ENST00000366666 ATP6V0BQ99437 205 aa9.34□□□□□ -0.91
CAPN9-203ENST00000366666 SLC25A2Q9BXI2 301 aa9.34□□□□□ -0.91
CAPN9-203ENST00000366666 SLC25A39Q9BZJ4 359 aaPredicted RBP9.34□□□□□ -0.91
CAPN9-203ENST00000366666 SELENOKQ9Y6D0 94 aa9.34□□□□□ -0.91
CAPN9-203ENST00000366666 IGHV3-66A0A0C4DH42 116 aa9.33□□□□□ -0.92
CAPN9-203ENST00000366666 KRTAP24-1Q3LI83 254 aa9.33□□□□□ -0.92
CAPN9-203ENST00000366666 HIGD1AQ9Y241 93 aa9.33□□□□□ -0.92
CAPN9-203ENST00000366666 ADARB2-AS1A8MUL3 147 aa9.33□□□□□ -0.92
CAPN9-203ENST00000366666 PYYP10082 97 aa9.33□□□□□ -0.92
CAPN9-203ENST00000366666 SLURP1P55000 103 aa9.33□□□□□ -0.92
CAPN9-203ENST00000366666 OR1L4Q8NGR5 311 aa9.33□□□□□ -0.92
CAPN9-203ENST00000366666 C18orf32Q8TCD1 76 aa9.33□□□□□ -0.92
CAPN9-203ENST00000366666 C4orf3Q8WVX3 66 aa9.33□□□□□ -0.92
CAPN9-203ENST00000366666 H3BRN7 92 aa9.32□□□□□ -0.92
CAPN9-203ENST00000366666 FAM162BQ5T6X4 162 aa9.32□□□□□ -0.92
CAPN9-203ENST00000366666 Q6ZVH6 145 aa9.32□□□□□ -0.92
CAPN9-203ENST00000366666 OR11H1Q8NG94 326 aa9.32□□□□□ -0.92
CAPN9-203ENST00000366666 HOXD3P31249 432 aaPredicted RBP9.31□□□□□ -0.92
CAPN9-203ENST00000366666 UBE2L3P68036 154 aaKnown RBP9.31□□□□□ -0.92
CAPN9-203ENST00000366666 TM4SF20Q53R12 229 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 RAX2Q96IS3 184 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 TRAV9-2A0A087WT02 112 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 H3BTX0 84 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 NDUFA4O00483 81 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 TAX1BP3O14907 124 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 SCGB2A1O75556 95 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 SYNJ2BPP57105 145 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 SLAQ13239 276 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 ATP5L2Q7Z4Y8 100 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 WFDC12Q8WWY7 111 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 SHANK2-AS3Q9BTD1 123 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 RNF24Q9Y225 148 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 STAB1Q9NY15 2570 aa9.31□□□□□ -0.92
CAPN9-203ENST00000366666 SCGB1A1P11684 91 aa9.3□□□□□ -0.92
CAPN9-203ENST00000366666 FAM19A2Q8N3H0 131 aa9.3□□□□□ -0.92
CAPN9-203ENST00000366666 TMEM190Q8WZ59 177 aa9.3□□□□□ -0.92
CAPN9-203ENST00000366666 PAXXQ9BUH6 204 aa9.3□□□□□ -0.92
CAPN9-203ENST00000366666 RABAC1Q9UI14 185 aa9.3□□□□□ -0.92
CAPN9-203ENST00000366666 PEX7O00628 323 aa9.3□□□□□ -0.92
CAPN9-203ENST00000366666 HSBP1O75506 76 aa9.3□□□□□ -0.92
CAPN9-203ENST00000366666 HIST1H1EP10412 219 aaKnown RBP9.3□□□□□ -0.92
CAPN9-203ENST00000366666 NTF3P20783 257 aa9.3□□□□□ -0.92
CAPN9-203ENST00000366666 NSUN5P1Q3KNT7 163 aa9.3□□□□□ -0.92
CAPN9-203ENST00000366666 DEFB125Q8N687 156 aa9.3□□□□□ -0.92
CAPN9-203ENST00000366666 NUP35Q8NFH5 326 aa9.3□□□□□ -0.92
CAPN9-203ENST00000366666 TSSC4Q9Y5U2 329 aaPredicted RBP9.3□□□□□ -0.92
CAPN9-203ENST00000366666 TRAV34A0A0B4J273 112 aa9.29□□□□□ -0.92
CAPN9-203ENST00000366666 GP9P14770 177 aa9.29□□□□□ -0.92
CAPN9-203ENST00000366666 GPHB5Q86YW7 130 aa9.29□□□□□ -0.92
CAPN9-203ENST00000366666 OR1N2Q8NGR9 330 aa9.29□□□□□ -0.92
CAPN9-203ENST00000366666 C17orf77Q96MU5 243 aa9.29□□□□□ -0.92
CAPN9-203ENST00000366666 COL6A5A8TX70 2615 aa9.29□□□□□ -0.92
CAPN9-203ENST00000366666 BUB3O43684 328 aa9.29□□□□□ -0.92
CAPN9-203ENST00000366666 PRB4P10163 310 aaPredicted RBP9.29□□□□□ -0.92
CAPN9-203ENST00000366666 STXBP6Q8NFX7 210 aa9.29□□□□□ -0.92
CAPN9-203ENST00000366666 DLX4Q92988 240 aaPredicted RBP9.29□□□□□ -0.92
CAPN9-203ENST00000366666 FXYD5Q96DB9 178 aa9.29□□□□□ -0.92
CAPN9-203ENST00000366666 TMEM213A2RRL7 107 aa9.28□□□□□ -0.92
CAPN9-203ENST00000366666 LINC01619G3V211 115 aa9.28□□□□□ -0.92
CAPN9-203ENST00000366666 M0R2Z0 102 aa9.28□□□□□ -0.92
CAPN9-203ENST00000366666 MRPS12O15235 138 aaKnown RBP9.28□□□□□ -0.92
CAPN9-203ENST00000366666 CA1P00915 261 aaPredicted RBP9.28□□□□□ -0.92
CAPN9-203ENST00000366666 S100A7P31151 101 aa9.28□□□□□ -0.92
CAPN9-203ENST00000366666 PSG3Q16557 428 aa9.28□□□□□ -0.92
CAPN9-203ENST00000366666 METTL26Q96S19 204 aa9.28□□□□□ -0.92
CAPN9-203ENST00000366666 SMPXQ9UHP9 88 aa9.28□□□□□ -0.92
CAPN9-203ENST00000366666 SMAD5-AS1Q9Y6J3 95 aa9.28□□□□□ -0.92
CAPN9-203ENST00000366666 U3KQE9 123 aa9.28□□□□□ -0.92
CAPN9-203ENST00000366666 GAGE12BA1L429 117 aa9.27□□□□□ -0.92
CAPN9-203ENST00000366666 MYCNOSP40205 109 aa9.27□□□□□ -0.92
CAPN9-203ENST00000366666 UBE2G1P62253 170 aa9.27□□□□□ -0.92
CAPN9-203ENST00000366666 FAM106AQ4KMX7 169 aa9.27□□□□□ -0.92
CAPN9-203ENST00000366666 GDF5OSQ5U4N7 250 aa9.27□□□□□ -0.92
CAPN9-203ENST00000366666 NHLRC2Q8NBF2 726 aa9.27□□□□□ -0.92
CAPN9-203ENST00000366666 LINC00479Q96M42 142 aa9.27□□□□□ -0.92
CAPN9-203ENST00000366666 A0A1B0GXF2 115 aa9.27□□□□□ -0.93
CAPN9-203ENST00000366666 G3V4G9 280 aa9.27□□□□□ -0.93
CAPN9-203ENST00000366666 CCL24O00175 119 aa9.27□□□□□ -0.93
CAPN9-203ENST00000366666 ADAMTSL5Q6ZMM2 481 aa9.27□□□□□ -0.93
CAPN9-203ENST00000366666 BLNKQ8WV28 456 aa9.27□□□□□ -0.93
CAPN9-203ENST00000366666 DPF1Q92782 380 aa9.27□□□□□ -0.93
CAPN9-203ENST00000366666 ST20Q9HBF5 79 aa9.27□□□□□ -0.93
CAPN9-203ENST00000366666 DAZ1Q9NQZ3 744 aaKnown RBP9.27□□□□□ -0.93
CAPN9-203ENST00000366666 KLF12Q9Y4X4 402 aa9.27□□□□□ -0.93
CAPN9-203ENST00000366666 TRRAPQ9Y4A5 3859 aa9.27□□□□□ -0.93
CAPN9-203ENST00000366666 C2orf70A6NJV1 201 aa9.26□□□□□ -0.93
CAPN9-203ENST00000366666 FHL3Q13643 280 aa9.26□□□□□ -0.93
CAPN9-203ENST00000366666 CT83Q5H943 113 aa9.26□□□□□ -0.93
CAPN9-203ENST00000366666 EBLN2Q6P2I7 272 aa9.26□□□□□ -0.93
CAPN9-203ENST00000366666 C12orf54Q6X4T0 127 aa9.26□□□□□ -0.93
CAPN9-203ENST00000366666 EPDR1Q9UM22 224 aa9.26□□□□□ -0.93
CAPN9-203ENST00000366666 HIGD1CA8MV81 97 aa9.26□□□□□ -0.93
CAPN9-203ENST00000366666 LCN12Q6JVE5 192 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms