RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 RIF1Q5UIP0 2472 aaKnown RBP-1.26□□□□□ -2.61
MIR539-201ENST00000365690 MGAM2Q2M2H8 2515 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 TRAV1-2A0A0B4J238 106 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 TRAV5A0A0B4J249 113 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 TRBV10-1A0A0K0K1A3 114 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 TINCRA0A1B0GVN0 87 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 TCRBV3S1A0A5B6 114 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 TMEM189A5PLL7 270 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 C9orf92A6NGG3 77 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 EVPLLA8MZ36 301 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 EEF1E1-BLOC1S5C9J1V9 151 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 CDC42EP2O14613 210 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 BIRC5O15392 142 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 CALUO43852 315 aaPredicted RBP-1.26□□□□□ -2.61
MIR539-201ENST00000365690 CST8O60676 142 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 IFNA4P05014 189 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 OR5G3P0C626 314 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 ANXA8P13928 327 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 DYNLT3P51808 116 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 SNRPD2P62316 118 aaKnown RBP-1.26□□□□□ -2.61
MIR539-201ENST00000365690 ALX1Q15699 326 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 C1orf195Q5TG92 126 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 ANXA8L1Q5VT79 327 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 CST9Q5W186 159 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 CLEC2AQ6UVW9 174 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 FAM9BQ8IZU0 186 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 FAM216BQ8N7L0 139 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 OR51D1Q8NGF3 324 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 MSANTD3Q96H12 275 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 TEX37Q96LM6 180 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 TSGA13Q96PP4 275 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 AMELXQ99217 191 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 PBDC1Q9BVG4 233 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 MAP1LC3BQ9GZQ8 125 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 C19orf12Q9NSK7 152 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 ANKRD50Q9ULJ7 1429 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 ANK1P16157 1881 aa-1.26□□□□□ -2.61
MIR539-201ENST00000365690 hCG_1818297A0A087WSY0 165 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 LOC107986453A0A1B0GWG9 222 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 A8MT66 165 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 J3KT08 172 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 TMEM256-PLSCR3K7ERE1 68 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 TAX1BP3O14907 124 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 GGCTO75223 188 aaKnown RBP-1.27□□□□□ -2.61
MIR539-201ENST00000365690 OR2H2O95918 312 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 SERPINA1P01009 418 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 TRACP01848 142 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 SMIM6P0DI80 62 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 SYT1P21579 422 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 DEFA3P59666 94 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 ERVS71-1P61550 626 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 ITGB3BPQ13352 177 aaPredicted RBP-1.27□□□□□ -2.61
MIR539-201ENST00000365690 ZNHIT3Q15649 155 aaPredicted RBP-1.27□□□□□ -2.61
MIR539-201ENST00000365690 RRN3P1Q2M238 152 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 HIST2H3PS2Q5TEC6 136 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 Q6Q795 121 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 CYP2G1PQ6ZSU1 146 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 IFT20Q8IY31 132 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 COX7B2Q8TF08 81 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 RAB8BQ92930 207 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 KCTD7Q96MP8 289 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 SERPINB11Q96P15 392 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 LXNQ9BS40 222 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 TVP23BQ9NYZ1 205 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 MED11Q9P086 117 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 VPS29Q9UBQ0 182 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 RABL2BQ9UNT1 228 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 NUP155O75694 1391 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 PRKDCP78527 4128 aaKnown RBP-1.27□□□□□ -2.61
MIR539-201ENST00000365690 ROBO3Q96MS0 1386 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 FAM135BQ49AJ0 1406 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 XIRP1Q702N8 1843 aaKnown RBP-1.27□□□□□ -2.61
MIR539-201ENST00000365690 DOCK5Q9H7D0 1870 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 WDR87Q6ZQQ6 2873 aa-1.27□□□□□ -2.61
MIR539-201ENST00000365690 LRRK2Q5S007 2527 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 WNK3Q9BYP7 1800 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 PAPPAQ13219 1627 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 SLIT1O75093 1534 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 FGD6Q6ZV73 1430 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 NSD3Q9BZ95 1437 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 CPSF4LA6NMK7 179 aaKnown RBP-1.28□□□□□ -2.61
MIR539-201ENST00000365690 C5orf58C9J3I9 102 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 FTCDNL1E5RQL4 147 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 CST7O76096 145 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 IFNA5P01569 189 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 TFF1P04155 84 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 STAG3L2P0CL84 134 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 COX8AP10176 69 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 FABP4P15090 132 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 CCL3L1P16619 93 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 POLR2JP52435 117 aaKnown RBP-1.28□□□□□ -2.61
MIR539-201ENST00000365690 TMBIM6P55061 237 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 HADHBP55084 474 aaKnown RBP-1.28□□□□□ -2.61
MIR539-201ENST00000365690 NDUFA6P56556 154 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 PSME3P61289 254 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 HIST1H3AP68431 136 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 POU6F1Q14863 301 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 Q3ZCU0 254 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 CCSMST1Q4G0I0 132 aa-1.28□□□□□ -2.61
MIR539-201ENST00000365690 CLVS2Q5SYC1 327 aa-1.28□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms