RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 KLK9Q9UKQ9 250 aa10.62□□□□□ -0.71
LDB3-202ENST00000361373 OTOGLQ3ZCN5 2332 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 TMEM213A2RRL7 107 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 ADCYAP1P18509 176 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 Q71RC1 249 aaPredicted RBP10.61□□□□□ -0.71
LDB3-202ENST00000361373 ZNF479Q96JC4 524 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 PYGO2Q9BRQ0 406 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 ATXN8Q156A1 80 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 SPRNQ5BIV9 151 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 OVOL2Q9BRP0 275 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 C9orf66Q5T8R8 295 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 RNF152Q8N8N0 203 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 A0A0U1RRA0 63 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 GAGE12JA6NER3 117 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 IGHV4-38-2P0DP08 117 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 GAGE1Q13065 139 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 GAGE4Q13068 117 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 GAGE5Q13069 117 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 GAGE13Q4V321 117 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 PRIMA1Q86XR5 153 aa10.61□□□□□ -0.71
LDB3-202ENST00000361373 GUSBP1Q15486 140 aa10.6□□□□□ -0.71
LDB3-202ENST00000361373 C2orf66Q6UXQ4 117 aa10.6□□□□□ -0.71
LDB3-202ENST00000361373 A0A1B0GV90 55 aa10.6□□□□□ -0.71
LDB3-202ENST00000361373 KNCNA6PVL3 124 aa10.6□□□□□ -0.71
LDB3-202ENST00000361373 SSBP2P81877 361 aaPredicted RBP10.6□□□□□ -0.71
LDB3-202ENST00000361373 RMI2Q96E14 147 aa10.6□□□□□ -0.71
LDB3-202ENST00000361373 TMEM243Q9BU79 118 aa10.6□□□□□ -0.71
LDB3-202ENST00000361373 IGLV11-55A0A075B6I3 123 aa10.6□□□□□ -0.71
LDB3-202ENST00000361373 SDHAF1A6NFY7 115 aa10.6□□□□□ -0.71
LDB3-202ENST00000361373 TSPAN13O95857 204 aa10.6□□□□□ -0.71
LDB3-202ENST00000361373 IGLV1-47P01700 117 aa10.6□□□□□ -0.71
LDB3-202ENST00000361373 INS-IGF2F8WCM5 200 aa10.6□□□□□ -0.71
LDB3-202ENST00000361373 CYYR1Q96J86 154 aa10.6□□□□□ -0.71
LDB3-202ENST00000361373 SMIM27A0A1W2PRY6 76 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 GAGE12BA1L429 117 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 C9JQL5 133 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 GAGE7O76087 117 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 GAGE12FP0CL80 117 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 GAGE12GP0CL81 117 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 GAGE12IP0CL82 117 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 NEGR1Q7Z3B1 354 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 ZMAT4Q9H898 229 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 V9GYV3 84 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 LEPROTO15243 131 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 BCL6BQ8N143 479 aaPredicted RBP10.59□□□□□ -0.71
LDB3-202ENST00000361373 C10orf126Q8N4M7 172 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 C18orf32Q8TCD1 76 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 TP53TG1Q9Y2A0 90 aa10.59□□□□□ -0.71
LDB3-202ENST00000361373 I3L2K1 104 aa10.58□□□□□ -0.72
LDB3-202ENST00000361373 C20orf78Q9BR46 151 aa10.58□□□□□ -0.72
LDB3-202ENST00000361373 LRRC75A-AS1Q8N1F1 130 aa10.58□□□□□ -0.72
LDB3-202ENST00000361373 Q8N9W7 124 aa10.58□□□□□ -0.72
LDB3-202ENST00000361373 TEX48A0A1B0GUV7 120 aa10.58□□□□□ -0.72
LDB3-202ENST00000361373 PMVKQ15126 192 aa10.58□□□□□ -0.72
LDB3-202ENST00000361373 LTAP01374 205 aa10.58□□□□□ -0.72
LDB3-202ENST00000361373 PLCE1Q9P212 2302 aa10.57□□□□□ -0.72
LDB3-202ENST00000361373 TRAV12-2A0A075B6T6 113 aa10.57□□□□□ -0.72
LDB3-202ENST00000361373 K7EIM0 57 aa10.57□□□□□ -0.72
LDB3-202ENST00000361373 C5orf56Q8N8D9 126 aa10.57□□□□□ -0.72
LDB3-202ENST00000361373 MRPL51Q4U2R6 128 aaKnown RBP10.57□□□□□ -0.72
LDB3-202ENST00000361373 ZNRF2Q8NHG8 242 aa10.57□□□□□ -0.72
LDB3-202ENST00000361373 ZC2HC1AQ96GY0 325 aa10.57□□□□□ -0.72
LDB3-202ENST00000361373 HIVEP2P31629 2446 aa10.57□□□□□ -0.72
LDB3-202ENST00000361373 FSTL3O95633 263 aa10.57□□□□□ -0.72
LDB3-202ENST00000361373 K7EMT4 169 aa10.57□□□□□ -0.72
LDB3-202ENST00000361373 ZNF493Q6ZR52 646 aa10.57□□□□□ -0.72
LDB3-202ENST00000361373 DOCK11Q5JSL3 2073 aa10.56□□□□□ -0.72
LDB3-202ENST00000361373 LOXL1Q08397 574 aaPredicted RBP10.56□□□□□ -0.72
LDB3-202ENST00000361373 MRPL52Q86TS9 123 aaKnown RBP10.56□□□□□ -0.72
LDB3-202ENST00000361373 ZNF561-AS1K7EIQ3 104 aa10.56□□□□□ -0.72
LDB3-202ENST00000361373 K7EMI3 77 aa10.56□□□□□ -0.72
LDB3-202ENST00000361373 CRYGCP07315 174 aa10.56□□□□□ -0.72
LDB3-202ENST00000361373 RHOHQ15669 191 aa10.56□□□□□ -0.72
LDB3-202ENST00000361373 SAMD5Q5TGI4 173 aa10.56□□□□□ -0.72
LDB3-202ENST00000361373 AGPAT4-IT1Q9H0P7 198 aa10.56□□□□□ -0.72
LDB3-202ENST00000361373 SMIM2Q9BVW6 85 aa10.56□□□□□ -0.72
LDB3-202ENST00000361373 IGKV1-17P01599 117 aa10.55□□□□□ -0.72
LDB3-202ENST00000361373 BLCAPP62952 87 aa10.55□□□□□ -0.72
LDB3-202ENST00000361373 CHAC1Q9BUX1 264 aa10.55□□□□□ -0.72
LDB3-202ENST00000361373 C11orf68Q9H3H3 251 aaKnown RBP10.55□□□□□ -0.72
LDB3-202ENST00000361373 ESDP10768 282 aa10.55□□□□□ -0.72
LDB3-202ENST00000361373 TRAV25A0A0B4J276 109 aa10.55□□□□□ -0.72
LDB3-202ENST00000361373 C10orf91Q5T1B1 145 aa10.55□□□□□ -0.72
LDB3-202ENST00000361373 AJUBAQ96IF1 538 aa10.55□□□□□ -0.72
LDB3-202ENST00000361373 SIRPDQ9H106 197 aa10.55□□□□□ -0.72
LDB3-202ENST00000361373 PRSS57Q6UWY2 283 aa10.55□□□□□ -0.72
LDB3-202ENST00000361373 TRAV8-2A0A0B4J237 113 aa10.54□□□□□ -0.72
LDB3-202ENST00000361373 IGHV3-16A0A0C4DH30 117 aa10.54□□□□□ -0.72
LDB3-202ENST00000361373 CTSGP08311 255 aa10.54□□□□□ -0.72
LDB3-202ENST00000361373 hDV102S1A0JD36 115 aa10.54□□□□□ -0.72
LDB3-202ENST00000361373 IGHG2P01859 326 aa10.54□□□□□ -0.72
LDB3-202ENST00000361373 CFHR3Q02985 330 aa10.54□□□□□ -0.72
LDB3-202ENST00000361373 Q8N7P7 452 aa10.54□□□□□ -0.72
LDB3-202ENST00000361373 MYCNOSP40205 109 aa10.54□□□□□ -0.72
LDB3-202ENST00000361373 PRR31Q5SQ13 230 aa10.53□□□□□ -0.72
LDB3-202ENST00000361373 LYPD6BQ8NI32 183 aa10.53□□□□□ -0.72
LDB3-202ENST00000361373 ZFP36P26651 326 aaKnown RBP10.53□□□□□ -0.72
LDB3-202ENST00000361373 DYNAPQ8N1N2 210 aa10.53□□□□□ -0.72
LDB3-202ENST00000361373 SFTA2Q6UW10 78 aa10.53□□□□□ -0.72
LDB3-202ENST00000361373 C16orf54Q6UWD8 224 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 328.3 ms