RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 TRBV12-3P01733 135 aa20.14■□□□□ 0.81
CUEDC1-201ENST00000360238 PRSS57Q6UWY2 283 aa20.14■□□□□ 0.81
CUEDC1-201ENST00000360238 UNQ9165/PRO28630Q6UXU0 137 aa20.14■□□□□ 0.81
CUEDC1-201ENST00000360238 LINC01546A6NGU7 62 aa20.13■□□□□ 0.81
CUEDC1-201ENST00000360238 OR8A1Q8NGG7 326 aa20.13■□□□□ 0.81
CUEDC1-201ENST00000360238 PMCHL2Q9BQD1 86 aa20.12■□□□□ 0.81
CUEDC1-201ENST00000360238 LGALS9BQ3B8N2 356 aa20.12■□□□□ 0.81
CUEDC1-201ENST00000360238 LGALS9CQ6DKI2 356 aa20.12■□□□□ 0.81
CUEDC1-201ENST00000360238 SMAD7O15105 426 aaKnown RBP20.11■□□□□ 0.81
CUEDC1-201ENST00000360238 ZNF738Q8NE65 137 aa20.11■□□□□ 0.81
CUEDC1-201ENST00000360238 IGHV7-4-1A0A0J9YVY3 117 aa20.1■□□□□ 0.81
CUEDC1-201ENST00000360238 GPHB5Q86YW7 130 aa20.1■□□□□ 0.81
CUEDC1-201ENST00000360238 DPF1Q92782 380 aa20.1■□□□□ 0.81
CUEDC1-201ENST00000360238 C20orf173Q96LM9 149 aa20.1■□□□□ 0.81
CUEDC1-201ENST00000360238 GOLT1BQ9Y3E0 138 aa20.1■□□□□ 0.81
CUEDC1-201ENST00000360238 TP73-AS1Q9UF72 201 aa20.1■□□□□ 0.81
CUEDC1-201ENST00000360238 SPTAN1Q13813 2472 aaKnown RBP20.09■□□□□ 0.81
CUEDC1-201ENST00000360238 DOPEY1Q5JWR5 2465 aa20.09■□□□□ 0.81
CUEDC1-201ENST00000360238 CFAP46Q8IYW2 2715 aa20.09■□□□□ 0.81
CUEDC1-201ENST00000360238 PIEZO1Q92508 2521 aa20.09■□□□□ 0.81
CUEDC1-201ENST00000360238 B4DSR2 109 aa20.09■□□□□ 0.81
CUEDC1-201ENST00000360238 SOCS3O14543 225 aa20.09■□□□□ 0.81
CUEDC1-201ENST00000360238 FOXE3Q13461 319 aa20.09■□□□□ 0.81
CUEDC1-201ENST00000360238 SPOCK3Q9BQ16 436 aa20.09■□□□□ 0.81
CUEDC1-201ENST00000360238 NXT2Q9NPJ8 142 aaKnown RBP20.09■□□□□ 0.81
CUEDC1-201ENST00000360238 TNFRSF6BO95407 300 aa20.08■□□□□ 0.8
CUEDC1-201ENST00000360238 IGLV1-40P01703 118 aa20.08■□□□□ 0.8
CUEDC1-201ENST00000360238 PF4V1P10720 104 aa20.08■□□□□ 0.8
CUEDC1-201ENST00000360238 LINC00477Q96M19 166 aa20.08■□□□□ 0.8
CUEDC1-201ENST00000360238 IGHV4-4A0A075B6R2 117 aa20.07■□□□□ 0.8
CUEDC1-201ENST00000360238 OVOL1O14753 267 aa20.07■□□□□ 0.8
CUEDC1-201ENST00000360238 SNAI2O43623 268 aa20.07■□□□□ 0.8
CUEDC1-201ENST00000360238 DSCR9P59020 149 aa20.07■□□□□ 0.8
CUEDC1-201ENST00000360238 IFI27L1Q96BM0 104 aa20.07■□□□□ 0.8
CUEDC1-201ENST00000360238 A0A0G2JLM5 398 aa20.07■□□□□ 0.8
CUEDC1-201ENST00000360238 GATA3P23771 443 aa20.07■□□□□ 0.8
CUEDC1-201ENST00000360238 BLCAPP62952 87 aa20.07■□□□□ 0.8
CUEDC1-201ENST00000360238 ZNF124Q15973 351 aa20.07■□□□□ 0.8
CUEDC1-201ENST00000360238 SMIM15Q7Z3B0 74 aa20.07■□□□□ 0.8
CUEDC1-201ENST00000360238 KLK15Q9H2R5 256 aa20.07■□□□□ 0.8
CUEDC1-201ENST00000360238 IGHV3-11P01762 117 aa20.06■□□□□ 0.8
CUEDC1-201ENST00000360238 NPSP0C0P6 89 aa20.06■□□□□ 0.8
CUEDC1-201ENST00000360238 COX8AP10176 69 aa20.06■□□□□ 0.8
CUEDC1-201ENST00000360238 CACNG7P62955 275 aa20.06■□□□□ 0.8
CUEDC1-201ENST00000360238 OR4X2Q8NGF9 303 aa20.06■□□□□ 0.8
CUEDC1-201ENST00000360238 ZFHX3Q15911 3703 aa20.06■□□□□ 0.8
CUEDC1-201ENST00000360238 ORAOV1Q8WV07 137 aa20.05■□□□□ 0.8
CUEDC1-201ENST00000360238 ZNF580Q9UK33 172 aa20.05■□□□□ 0.8
CUEDC1-201ENST00000360238 GAS8-AS1O95177 125 aa20.05■□□□□ 0.8
CUEDC1-201ENST00000360238 FXYD7P58549 80 aa20.05■□□□□ 0.8
CUEDC1-201ENST00000360238 OR10J6PQ8NGY7 276 aa20.05■□□□□ 0.8
CUEDC1-201ENST00000360238 VPS13CQ709C8 3753 aa20.05■□□□□ 0.8
CUEDC1-201ENST00000360238 CFHR3Q02985 330 aa20.04■□□□□ 0.8
CUEDC1-201ENST00000360238 PRR9Q5T870 116 aa20.04■□□□□ 0.8
CUEDC1-201ENST00000360238 MPV17L2Q567V2 206 aa20.04■□□□□ 0.8
CUEDC1-201ENST00000360238 OR1N2Q8NGR9 330 aa20.03■□□□□ 0.8
CUEDC1-201ENST00000360238 EVI2AP22794 236 aa20.02■□□□□ 0.8
CUEDC1-201ENST00000360238 C12orf54Q6X4T0 127 aa20.02■□□□□ 0.8
CUEDC1-201ENST00000360238 Q6ZS46 218 aa20.02■□□□□ 0.8
CUEDC1-201ENST00000360238 COX11Q9Y6N1 276 aa20.02■□□□□ 0.8
CUEDC1-201ENST00000360238 AVPP01185 164 aa20.02■□□□□ 0.8
CUEDC1-201ENST00000360238 FCER1GP30273 86 aa20.02■□□□□ 0.8
CUEDC1-201ENST00000360238 ZFAND2AQ8N6M9 145 aa20.02■□□□□ 0.8
CUEDC1-201ENST00000360238 COL12A1Q99715 3063 aa20.01■□□□□ 0.79
CUEDC1-201ENST00000360238 DEFB125Q8N687 156 aa20.01■□□□□ 0.79
CUEDC1-201ENST00000360238 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.01■□□□□ 0.79
CUEDC1-201ENST00000360238 Q6ZQT7 251 aa20.01■□□□□ 0.79
CUEDC1-201ENST00000360238 Q8N8P6 123 aa20.01■□□□□ 0.79
CUEDC1-201ENST00000360238 PRSS47A8MTI9 375 aa20■□□□□ 0.79
CUEDC1-201ENST00000360238 NUDT3O95989 172 aa20■□□□□ 0.79
CUEDC1-201ENST00000360238 SLC25A16P16260 332 aa20■□□□□ 0.79
CUEDC1-201ENST00000360238 BVES-AS1Q5T3Y7 98 aa20■□□□□ 0.79
CUEDC1-201ENST00000360238 SPANXN1Q5VSR9 72 aa20■□□□□ 0.79
CUEDC1-201ENST00000360238 OR2K2Q8NGT1 345 aa20■□□□□ 0.79
CUEDC1-201ENST00000360238 DAZ1Q9NQZ3 744 aaKnown RBP20■□□□□ 0.79
CUEDC1-201ENST00000360238 CELSR1Q9NYQ6 3014 aa20■□□□□ 0.79
CUEDC1-201ENST00000360238 TRAV21A0A0B4J279 112 aa20■□□□□ 0.79
CUEDC1-201ENST00000360238 LEPP41159 167 aa20■□□□□ 0.79
CUEDC1-201ENST00000360238 IGSF10Q6WRI0 2623 aa19.99■□□□□ 0.79
CUEDC1-201ENST00000360238 H3BVH4 76 aa19.99■□□□□ 0.79
CUEDC1-201ENST00000360238 GATA1P15976 413 aaPredicted RBP19.99■□□□□ 0.79
CUEDC1-201ENST00000360238 FAM19A4Q96LR4 140 aa19.99■□□□□ 0.79
CUEDC1-201ENST00000360238 IGLV2-18A0A075B6J9 118 aa19.98■□□□□ 0.79
CUEDC1-201ENST00000360238 RHPN1-AS1Q9BWJ2 59 aa19.98■□□□□ 0.79
CUEDC1-201ENST00000360238 UFC1Q9Y3C8 167 aa19.98■□□□□ 0.79
CUEDC1-201ENST00000360238 TRBV7-9A0A0J9YWB2 115 aa19.98■□□□□ 0.79
CUEDC1-201ENST00000360238 ANKRD39Q53RE8 183 aa19.98■□□□□ 0.79
CUEDC1-201ENST00000360238 LCNL1Q6ZST4 164 aa19.97■□□□□ 0.79
CUEDC1-201ENST00000360238 NRACQ8N912 160 aa19.97■□□□□ 0.79
CUEDC1-201ENST00000360238 USP9XQ93008 2570 aaPredicted RBP19.97■□□□□ 0.79
CUEDC1-201ENST00000360238 RPL11P62913 178 aaKnown RBP19.97■□□□□ 0.79
CUEDC1-201ENST00000360238 APRG1Q8IVJ8 170 aa19.97■□□□□ 0.79
CUEDC1-201ENST00000360238 FGF6P10767 208 aa19.96■□□□□ 0.79
CUEDC1-201ENST00000360238 C2orf91Q6ZV80 131 aa19.96■□□□□ 0.79
CUEDC1-201ENST00000360238 FLNCQ14315 2725 aa19.96■□□□□ 0.79
CUEDC1-201ENST00000360238 SPG11Q96JI7 2443 aa19.96■□□□□ 0.79
CUEDC1-201ENST00000360238 K7EMT4 169 aa19.95■□□□□ 0.78
CUEDC1-201ENST00000360238 TM4SF20Q53R12 229 aa19.95■□□□□ 0.78
CUEDC1-201ENST00000360238 PEF1Q9UBV8 284 aaKnown RBP19.95■□□□□ 0.78
CUEDC1-201ENST00000360238 LINC01356Q8N9X3 169 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms