RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 SH2D1AO60880 128 aa10.14□□□□□ -0.79
CCDC197-201ENST00000359253 DUSP14O95147 198 aaKnown RBP10.14□□□□□ -0.79
CCDC197-201ENST00000359253 S100A8P05109 93 aa10.14□□□□□ -0.79
CCDC197-201ENST00000359253 EBLN2Q6P2I7 272 aa10.14□□□□□ -0.79
CCDC197-201ENST00000359253 ADAMTSL5Q6ZMM2 481 aa10.14□□□□□ -0.79
CCDC197-201ENST00000359253 CITED1Q99966 193 aa10.14□□□□□ -0.79
CCDC197-201ENST00000359253 TRAPPC1Q9Y5R8 145 aa10.14□□□□□ -0.79
CCDC197-201ENST00000359253 IGKV3-7A0A075B6H7 116 aa10.13□□□□□ -0.79
CCDC197-201ENST00000359253 PHOX2AO14813 284 aa10.13□□□□□ -0.79
CCDC197-201ENST00000359253 CA1P00915 261 aaPredicted RBP10.13□□□□□ -0.79
CCDC197-201ENST00000359253 HLA-DQA1P01909 254 aa10.13□□□□□ -0.79
CCDC197-201ENST00000359253 CRISP2P16562 243 aa10.13□□□□□ -0.79
CCDC197-201ENST00000359253 EDN2P20800 178 aa10.13□□□□□ -0.79
CCDC197-201ENST00000359253 CMC4P56277 68 aaPredicted RBP10.13□□□□□ -0.79
CCDC197-201ENST00000359253 DEFB114Q30KQ6 69 aa10.13□□□□□ -0.79
CCDC197-201ENST00000359253 LINC01559Q495D7 138 aa10.13□□□□□ -0.79
CCDC197-201ENST00000359253 APRG1Q8IVJ8 170 aa10.13□□□□□ -0.79
CCDC197-201ENST00000359253 OR2K2Q8NGT1 345 aa10.13□□□□□ -0.79
CCDC197-201ENST00000359253 Q8TAT8 98 aa10.13□□□□□ -0.79
CCDC197-201ENST00000359253 BORCS7Q96B45 105 aa10.13□□□□□ -0.79
CCDC197-201ENST00000359253 FAM19A4Q96LR4 140 aa10.13□□□□□ -0.79
CCDC197-201ENST00000359253 SPAG8Q99932 426 aaPredicted RBP10.13□□□□□ -0.79
CCDC197-201ENST00000359253 OR4C46A6NHA9 309 aa10.12□□□□□ -0.79
CCDC197-201ENST00000359253 TCL1AP56279 114 aa10.12□□□□□ -0.79
CCDC197-201ENST00000359253 FOXI2Q6ZQN5 318 aa10.12□□□□□ -0.79
CCDC197-201ENST00000359253 WFDC3Q8IUB2 231 aa10.12□□□□□ -0.79
CCDC197-201ENST00000359253 GPR61Q9BZJ8 451 aa10.12□□□□□ -0.79
CCDC197-201ENST00000359253 STAB1Q9NY15 2570 aa10.11□□□□□ -0.79
CCDC197-201ENST00000359253 TRAV21A0A0B4J279 112 aa10.11□□□□□ -0.79
CCDC197-201ENST00000359253 LOC105371267A0A1B0GV96 52 aa10.11□□□□□ -0.79
CCDC197-201ENST00000359253 FABP9Q0Z7S8 132 aa10.11□□□□□ -0.79
CCDC197-201ENST00000359253 RIGQ13278 110 aa10.11□□□□□ -0.79
CCDC197-201ENST00000359253 ZFP82Q8N141 532 aa10.11□□□□□ -0.79
CCDC197-201ENST00000359253 C11orf44Q8N8P7 122 aa10.11□□□□□ -0.79
CCDC197-201ENST00000359253 GTSF1Q8WW33 167 aa10.11□□□□□ -0.79
CCDC197-201ENST00000359253 FRZBQ92765 325 aa10.11□□□□□ -0.79
CCDC197-201ENST00000359253 A0A0J9YX75 114 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 A0A1B0GUT8 65 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 A0A1B0GXF2 115 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 A0A1W2PRX2 142 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 ADARB2-AS1A8MUL3 147 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 SNURFLB1AK76 121 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 F2Z2F3 143 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 HIST1H2BKO60814 126 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 HIST1H2BJP06899 126 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 TRGC1P0CF51 173 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 HIST1H2BOP23527 126 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 TSPOP30536 169 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 HIST1H2BBP33778 126 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 LEPP41159 167 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 ZNF80P51504 273 aaPredicted RBP10.1□□□□□ -0.79
CCDC197-201ENST00000359253 HIST1H2BDP58876 126 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 HIST1H2BCP62807 126 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 HBBP68871 147 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 HIST2H2BEQ16778 126 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 PSMG4Q5JS54 123 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.1□□□□□ -0.79
CCDC197-201ENST00000359253 TMEM136Q6ZRR5 245 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 HIST1H2BHQ93079 126 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 DUX3Q96PT4 197 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 HIST1H2BNQ99877 126 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 HIST1H2BMQ99879 126 aa10.1□□□□□ -0.79
CCDC197-201ENST00000359253 C5orf52A6NGY3 159 aa10.09□□□□□ -0.79
CCDC197-201ENST00000359253 ORM1P02763 201 aa10.09□□□□□ -0.79
CCDC197-201ENST00000359253 GPX1P07203 203 aa10.09□□□□□ -0.79
CCDC197-201ENST00000359253 ZNF688P0C7X2 276 aa10.09□□□□□ -0.79
CCDC197-201ENST00000359253 TFPI2P48307 235 aa10.09□□□□□ -0.79
CCDC197-201ENST00000359253 MRPL54Q6P161 138 aaKnown RBP10.09□□□□□ -0.79
CCDC197-201ENST00000359253 ZFAND2AQ8N6M9 145 aa10.09□□□□□ -0.79
CCDC197-201ENST00000359253 MRPL18Q9H0U6 180 aaKnown RBP10.09□□□□□ -0.79
CCDC197-201ENST00000359253 KLLNB2CW77 178 aa10.08□□□□□ -0.8
CCDC197-201ENST00000359253 KRTAP10-3P60369 221 aa10.08□□□□□ -0.8
CCDC197-201ENST00000359253 TMEM61Q8N0U2 210 aa10.08□□□□□ -0.8
CCDC197-201ENST00000359253 GATD1Q8NB37 220 aa10.08□□□□□ -0.8
CCDC197-201ENST00000359253 PGLYRP4Q96LB8 373 aa10.08□□□□□ -0.8
CCDC197-201ENST00000359253 CLUHP3Q96NS8 147 aa10.08□□□□□ -0.8
CCDC197-201ENST00000359253 TENM1Q9UKZ4 2725 aa10.08□□□□□ -0.8
CCDC197-201ENST00000359253 A8MTW9 85 aa10.07□□□□□ -0.8
CCDC197-201ENST00000359253 APCSP02743 223 aa10.07□□□□□ -0.8
CCDC197-201ENST00000359253 IGLC6P0CF74 106 aa10.07□□□□□ -0.8
CCDC197-201ENST00000359253 CTRLP40313 264 aa10.07□□□□□ -0.8
CCDC197-201ENST00000359253 RAB4BP61018 213 aa10.07□□□□□ -0.8
CCDC197-201ENST00000359253 CD300EQ496F6 205 aaPredicted RBP10.07□□□□□ -0.8
CCDC197-201ENST00000359253 COA6Q5JTJ3 125 aaKnown RBP10.07□□□□□ -0.8
CCDC197-201ENST00000359253 FER1L6-AS1Q8NA97 138 aa10.07□□□□□ -0.8
CCDC197-201ENST00000359253 FAM110AQ9BQ89 295 aa10.07□□□□□ -0.8
CCDC197-201ENST00000359253 UBE2CO00762 179 aa10.06□□□□□ -0.8
CCDC197-201ENST00000359253 SPINK4O60575 86 aa10.06□□□□□ -0.8
CCDC197-201ENST00000359253 ZNF705DP0CH99 300 aaPredicted RBP10.06□□□□□ -0.8
CCDC197-201ENST00000359253 ZNF705BP0CI00 300 aaPredicted RBP10.06□□□□□ -0.8
CCDC197-201ENST00000359253 HOXA5P20719 270 aa10.06□□□□□ -0.8
CCDC197-201ENST00000359253 NDUFA6P56556 154 aa10.06□□□□□ -0.8
CCDC197-201ENST00000359253 NSUN5P1Q3KNT7 163 aa10.06□□□□□ -0.8
CCDC197-201ENST00000359253 DNLZQ5SXM8 178 aa10.06□□□□□ -0.8
CCDC197-201ENST00000359253 KCNS1Q96KK3 526 aa10.06□□□□□ -0.8
CCDC197-201ENST00000359253 CNFNQ9BYD5 112 aa10.06□□□□□ -0.8
CCDC197-201ENST00000359253 DNHD1Q96M86 4753 aa10.06□□□□□ -0.8
CCDC197-201ENST00000359253 IGKV3D-20A0A0C4DH25 116 aa10.05□□□□□ -0.8
CCDC197-201ENST00000359253 F6UB75 175 aa10.05□□□□□ -0.8
CCDC197-201ENST00000359253 PF4P02776 101 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms