RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 LTBP1Q14766 1721 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 WFDC10AQ9H1F0 79 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 IGF1P05019 195 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 VPREB3Q9UKI3 123 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 LHFPL1Q86WI0 220 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 SIRPDQ9H106 197 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 TEX48A0A1B0GUV7 120 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 Q86TA4 180 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 NDUFA4L2Q9NRX3 87 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 MRPL27Q9P0M9 148 aaKnown RBP5.74□□□□□ -1.49
VPS13A-202ENST00000357409 RPL39P62891 51 aaKnown RBP5.74□□□□□ -1.49
VPS13A-202ENST00000357409 UTF1Q5T230 341 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 SHANK2-AS3Q9BTD1 123 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 C14orf132Q9NPU4 83 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 IGHV7-4-1A0A0J9YVY3 117 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 SIGMAR1Q99720 223 aa5.74□□□□□ -1.49
VPS13A-202ENST00000357409 UBR3Q6ZT12 1888 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 FOCADQ5VW36 1801 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 TIRAPP58753 221 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 MRPL53Q96EL3 112 aaKnown RBP5.73□□□□□ -1.49
VPS13A-202ENST00000357409 TPRP12270 2363 aaKnown RBP5.73□□□□□ -1.49
VPS13A-202ENST00000357409 SYS1-DBNDD2H3BUS1 97 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 PLEKHB2Q96CS7 222 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 HIGD2AQ9BW72 106 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 DOCK3Q8IZD9 2030 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 IGHV1-24A0A0C4DH33 117 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 TMEM14EPQ6UXP3 125 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 DSCR8Q96T75 97 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 FGF23Q9GZV9 251 aaPredicted RBP5.73□□□□□ -1.49
VPS13A-202ENST00000357409 SOCS3O14543 225 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 IGF2-ASQ6U949 168 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 PET117Q6UWS5 81 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 SPART-AS1P0CW21 52 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 UNQ9165/PRO28630Q6UXU0 137 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 C22orf34Q6ZV56 151 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 SMAD5-AS1Q9Y6J3 95 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 ATP5G1P05496 136 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 ZNF664Q8N3J9 261 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 ATP6V0E2Q8NHE4 81 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 AGPAT4-IT1Q9H0P7 198 aa5.73□□□□□ -1.49
VPS13A-202ENST00000357409 CRYBA4P53673 196 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 PROK1P58294 105 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 PRR20EP86478 221 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 PRR20CP86479 221 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 PRR20DP86480 221 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 PRR20BP86481 221 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 PRR20AP86496 221 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 TMEM14BQ9NUH8 114 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 IGLV2-8P01709 118 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 VSIG2Q96IQ7 327 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 TRBV19A0A075B6N1 114 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 A8MWP6 167 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 NDUFA4O00483 81 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 NDUFS6O75380 124 aaKnown RBP5.72□□□□□ -1.49
VPS13A-202ENST00000357409 ATP5IP56385 69 aaPredicted RBP5.72□□□□□ -1.49
VPS13A-202ENST00000357409 Q9H8V8 135 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 ETDCA0A1B0GVM5 59 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 H3BMG7 143 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 IGHV4-30-4P0DP06 118 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 IGHV4-31P0DP07 118 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 ZNF833PQ6ZTB9 187 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 COX7B2Q8TF08 81 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 CHCHD1Q96BP2 118 aaKnown RBP5.72□□□□□ -1.49
VPS13A-202ENST00000357409 IGKV3D-7A0A0C4DH55 119 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 LY6G6DO95868 133 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 TAF1LQ8IZX4 1826 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 SPINK6Q6UWN8 80 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 C9orf47Q6ZRZ4 202 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 Q6ZS46 218 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 ZNF843Q8N446 348 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 IGHG4P01861 327 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 SCXQ7RTU7 201 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 MDFICQ9P1T7 246 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 SMPXQ9UHP9 88 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 ARID1AO14497 2285 aa5.72□□□□□ -1.49
VPS13A-202ENST00000357409 FAM231BA6NCW3 169 aa5.71□□□□□ -1.49
VPS13A-202ENST00000357409 IGHV2-70P01814 119 aa5.71□□□□□ -1.49
VPS13A-202ENST00000357409 NDUFA12Q9UI09 145 aa5.71□□□□□ -1.49
VPS13A-202ENST00000357409 H0Y9J4 135 aa5.71□□□□□ -1.49
VPS13A-202ENST00000357409 PFN1P07737 140 aaKnown RBP5.71□□□□□ -1.49
VPS13A-202ENST00000357409 QRFPP83859 136 aa5.71□□□□□ -1.49
VPS13A-202ENST00000357409 C1orf194Q5T5A4 169 aa5.71□□□□□ -1.49
VPS13A-202ENST00000357409 MTCL1Q9Y4B5 1905 aaKnown RBP5.71□□□□□ -1.49
VPS13A-202ENST00000357409 Q8N9W7 124 aa5.71□□□□□ -1.49
VPS13A-202ENST00000357409 PPBPP02775 128 aa5.71□□□□□ -1.5
VPS13A-202ENST00000357409 LOC105371267A0A1B0GV96 52 aa5.71□□□□□ -1.5
VPS13A-202ENST00000357409 MPDZO75970 2070 aa5.71□□□□□ -1.5
VPS13A-202ENST00000357409 HIST3H2BBQ8N257 126 aa5.71□□□□□ -1.5
VPS13A-202ENST00000357409 INTS1Q8N201 2190 aaKnown RBP5.71□□□□□ -1.5
VPS13A-202ENST00000357409 DCANP1Q8TF63 244 aa5.7□□□□□ -1.5
VPS13A-202ENST00000357409 MED12Q93074 2177 aa5.7□□□□□ -1.5
VPS13A-202ENST00000357409 DOCK4Q8N1I0 1966 aa5.7□□□□□ -1.5
VPS13A-202ENST00000357409 CHD5Q8TDI0 1954 aa5.7□□□□□ -1.5
VPS13A-202ENST00000357409 IGHV7-81A0A0B4J1V7 117 aa5.7□□□□□ -1.5
VPS13A-202ENST00000357409 CACNA1BQ00975 2339 aa5.7□□□□□ -1.5
VPS13A-202ENST00000357409 IGKV1-17P01599 117 aa5.7□□□□□ -1.5
VPS13A-202ENST00000357409 LINC00173Q6ZV60 143 aa5.7□□□□□ -1.5
VPS13A-202ENST00000357409 C11orf45Q8TAV5 145 aa5.7□□□□□ -1.5
VPS13A-202ENST00000357409 YLPM1P49750 1951 aaKnown RBP5.7□□□□□ -1.5
VPS13A-202ENST00000357409 C15orf65H3BRN8 121 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms