RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 LINC00311Q8N616 119 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 VOPP1Q96AW1 172 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 FXYD5Q96DB9 178 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 H3BT86 120 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 FOXI1Q12951 378 aa10.23□□□□□ -0.77
SMC4-202ENST00000357388 Q0VFX4 171 aa10.22□□□□□ -0.77
SMC4-202ENST00000357388 SH2D6Q7Z4S9 175 aa10.22□□□□□ -0.77
SMC4-202ENST00000357388 DOCK5Q9H7D0 1870 aa10.22□□□□□ -0.77
SMC4-202ENST00000357388 G3V4G9 280 aa10.22□□□□□ -0.77
SMC4-202ENST00000357388 SPINK13Q1W4C9 94 aa10.22□□□□□ -0.77
SMC4-202ENST00000357388 Q8TCH9 128 aa10.22□□□□□ -0.77
SMC4-202ENST00000357388 WIPF3A6NGB9 483 aa10.21□□□□□ -0.77
SMC4-202ENST00000357388 CACNA1IQ9P0X4 2223 aa10.21□□□□□ -0.77
SMC4-202ENST00000357388 MTCL1Q9Y4B5 1905 aaKnown RBP10.21□□□□□ -0.77
SMC4-202ENST00000357388 CLPSP04118 112 aa10.21□□□□□ -0.77
SMC4-202ENST00000357388 LYPD2Q6UXB3 125 aa10.21□□□□□ -0.77
SMC4-202ENST00000357388 CACNA1EQ15878 2313 aa10.21□□□□□ -0.77
SMC4-202ENST00000357388 SPTBN1Q01082 2364 aaKnown RBP10.21□□□□□ -0.77
SMC4-202ENST00000357388 MRPL55Q7Z7F7 128 aaKnown RBP10.21□□□□□ -0.78
SMC4-202ENST00000357388 ABCA7Q8IZY2 2146 aa10.21□□□□□ -0.78
SMC4-202ENST00000357388 RNF144BQ7Z419 303 aa10.2□□□□□ -0.78
SMC4-202ENST00000357388 PCP2Q8IVA1 136 aa10.2□□□□□ -0.78
SMC4-202ENST00000357388 DYNAPQ8N1N2 210 aa10.2□□□□□ -0.78
SMC4-202ENST00000357388 NDUFB1O75438 58 aa10.2□□□□□ -0.78
SMC4-202ENST00000357388 KLK9Q9UKQ9 250 aa10.2□□□□□ -0.78
SMC4-202ENST00000357388 TRBV10-2A0A0K0K1G8 114 aa10.2□□□□□ -0.78
SMC4-202ENST00000357388 ATP6V0E1O15342 81 aa10.2□□□□□ -0.78
SMC4-202ENST00000357388 RUSC1-AS1Q66K80 236 aa10.2□□□□□ -0.78
SMC4-202ENST00000357388 Q9H8V8 135 aa10.2□□□□□ -0.78
SMC4-202ENST00000357388 RALGAPA1Q6GYQ0 2036 aa10.2□□□□□ -0.78
SMC4-202ENST00000357388 C5orf63A6NC05 138 aa10.2□□□□□ -0.78
SMC4-202ENST00000357388 RNASE8Q8TDE3 154 aaKnown RBP10.2□□□□□ -0.78
SMC4-202ENST00000357388 TAX1BP3O14907 124 aa10.2□□□□□ -0.78
SMC4-202ENST00000357388 C22orf46C9J442 243 aa10.19□□□□□ -0.78
SMC4-202ENST00000357388 PRR20EP86478 221 aa10.19□□□□□ -0.78
SMC4-202ENST00000357388 PRR20CP86479 221 aa10.19□□□□□ -0.78
SMC4-202ENST00000357388 PRR20DP86480 221 aa10.19□□□□□ -0.78
SMC4-202ENST00000357388 PRR20BP86481 221 aa10.19□□□□□ -0.78
SMC4-202ENST00000357388 PRR20AP86496 221 aa10.19□□□□□ -0.78
SMC4-202ENST00000357388 DUX4L9Q6RFH8 374 aaPredicted RBP10.19□□□□□ -0.78
SMC4-202ENST00000357388 SVIPQ8NHG7 77 aa10.19□□□□□ -0.78
SMC4-202ENST00000357388 K7EN84 100 aa10.19□□□□□ -0.78
SMC4-202ENST00000357388 ZFP2Q6ZN57 461 aa10.19□□□□□ -0.78
SMC4-202ENST00000357388 IGHV3-16A0A0C4DH30 117 aa10.19□□□□□ -0.78
SMC4-202ENST00000357388 C5orf24Q7Z6I8 188 aa10.19□□□□□ -0.78
SMC4-202ENST00000357388 ZNF581Q9P0T4 197 aa10.19□□□□□ -0.78
SMC4-202ENST00000357388 PIKFYVEQ9Y2I7 2098 aa10.19□□□□□ -0.78
SMC4-202ENST00000357388 ADAMTS7Q9UKP4 1686 aa10.18□□□□□ -0.78
SMC4-202ENST00000357388 RS1O15537 224 aa10.18□□□□□ -0.78
SMC4-202ENST00000357388 ELANEP08246 267 aa10.18□□□□□ -0.78
SMC4-202ENST00000357388 RBBP6Q7Z6E9 1792 aaKnown RBP10.18□□□□□ -0.78
SMC4-202ENST00000357388 LINC00205P59089 165 aa10.18□□□□□ -0.78
SMC4-202ENST00000357388 LY6HO94772 140 aa10.18□□□□□ -0.78
SMC4-202ENST00000357388 PDE6GP18545 87 aa10.18□□□□□ -0.78
SMC4-202ENST00000357388 IGKV1-39P01597 117 aa10.18□□□□□ -0.78
SMC4-202ENST00000357388 IGKV1D-39P04432 117 aa10.18□□□□□ -0.78
SMC4-202ENST00000357388 MUSTN1Q8IVN3 82 aa10.18□□□□□ -0.78
SMC4-202ENST00000357388 VSIG2Q96IQ7 327 aa10.18□□□□□ -0.78
SMC4-202ENST00000357388 OPRPNQ99935 248 aaPredicted RBP10.18□□□□□ -0.78
SMC4-202ENST00000357388 SPTBN2O15020 2390 aa10.18□□□□□ -0.78
SMC4-202ENST00000357388 CNOT1A5YKK6 2376 aaKnown RBP10.17□□□□□ -0.78
SMC4-202ENST00000357388 NREPQ16612 68 aa10.17□□□□□ -0.78
SMC4-202ENST00000357388 IGFL3Q6UXB1 125 aa10.17□□□□□ -0.78
SMC4-202ENST00000357388 BRK1Q8WUW1 75 aa10.17□□□□□ -0.78
SMC4-202ENST00000357388 DOCK4Q8N1I0 1966 aa10.17□□□□□ -0.78
SMC4-202ENST00000357388 MRPL23Q16540 153 aaKnown RBP10.17□□□□□ -0.78
SMC4-202ENST00000357388 H3BUA1 57 aa10.17□□□□□ -0.78
SMC4-202ENST00000357388 B3GALT5-AS1P59052 145 aa10.17□□□□□ -0.78
SMC4-202ENST00000357388 ABCA1O95477 2261 aa10.16□□□□□ -0.78
SMC4-202ENST00000357388 TRAV26-1A0A087WT03 109 aa10.16□□□□□ -0.78
SMC4-202ENST00000357388 IGHV3-38A0A0C4DH36 116 aa10.16□□□□□ -0.78
SMC4-202ENST00000357388 IGKV3D-7A0A0C4DH55 119 aa10.16□□□□□ -0.78
SMC4-202ENST00000357388 CFHR3Q02985 330 aa10.16□□□□□ -0.78
SMC4-202ENST00000357388 LINC00643Q86TS7 51 aa10.16□□□□□ -0.78
SMC4-202ENST00000357388 COL11A2P13942 1736 aaPredicted RBP10.16□□□□□ -0.78
SMC4-202ENST00000357388 FAM120AOSQ5T036 256 aa10.16□□□□□ -0.78
SMC4-202ENST00000357388 CLPSL1A2RUU4 121 aa10.16□□□□□ -0.78
SMC4-202ENST00000357388 PARP14Q460N5 1801 aa10.15□□□□□ -0.78
SMC4-202ENST00000357388 TAF1LQ8IZX4 1826 aa10.15□□□□□ -0.78
SMC4-202ENST00000357388 UBE2BP63146 152 aa10.15□□□□□ -0.78
SMC4-202ENST00000357388 C1orf147Q96MC9 270 aaPredicted RBP10.15□□□□□ -0.78
SMC4-202ENST00000357388 BAALCQ8WXS3 180 aa10.15□□□□□ -0.78
SMC4-202ENST00000357388 PSME4Q14997 1843 aa10.15□□□□□ -0.78
SMC4-202ENST00000357388 A4D1N5 150 aa10.15□□□□□ -0.78
SMC4-202ENST00000357388 PATJQ8NI35 1801 aa10.15□□□□□ -0.79
SMC4-202ENST00000357388 WFDC2Q14508 124 aa10.14□□□□□ -0.79
SMC4-202ENST00000357388 TEX36Q5VZQ5 186 aa10.14□□□□□ -0.79
SMC4-202ENST00000357388 PIFOQ8TCI5 191 aa10.14□□□□□ -0.79
SMC4-202ENST00000357388 COL5A3P25940 1745 aaPredicted RBP10.14□□□□□ -0.79
SMC4-202ENST00000357388 SCN2AQ99250 2005 aa10.14□□□□□ -0.79
SMC4-202ENST00000357388 IGHV7-4-1A0A0J9YVY3 117 aa10.14□□□□□ -0.79
SMC4-202ENST00000357388 CRYGBP07316 175 aa10.14□□□□□ -0.79
SMC4-202ENST00000357388 RNF152Q8N8N0 203 aa10.14□□□□□ -0.79
SMC4-202ENST00000357388 SND1-IT1Q9HBX3 110 aa10.14□□□□□ -0.79
SMC4-202ENST00000357388 FHL1Q13642 323 aa10.14□□□□□ -0.79
SMC4-202ENST00000357388 ETDCA0A1B0GVM5 59 aa10.14□□□□□ -0.79
SMC4-202ENST00000357388 ANGP03950 147 aaKnown RBP10.14□□□□□ -0.79
SMC4-202ENST00000357388 CDPF1Q6NVV7 123 aa10.14□□□□□ -0.79
SMC4-202ENST00000357388 ARHGEF17Q96PE2 2063 aaPredicted RBP10.14□□□□□ -0.79
SMC4-202ENST00000357388 PROP1O75360 226 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms