RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 GCGP01275 180 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 LTAP01374 205 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 S100PP25815 95 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 RANP62826 216 aaKnown RBP5.22□□□□□ -1.57
VPS13A-201ENST00000355766 C9orf66Q5T8R8 295 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 KCNIP4Q6PIL6 250 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 C16orf54Q6UWD8 224 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 C18orf65Q6ZTR6 163 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 CBLN2Q8IUK8 224 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 GLMPQ8WWB7 406 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 SFRP2Q96HF1 295 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 YPEL4Q96NS1 127 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 OR5B12Q96R08 314 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 ZNF331Q9NQX6 463 aaPredicted RBP5.22□□□□□ -1.57
VPS13A-201ENST00000355766 PPP1R14DQ9NXH3 145 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 ZNF256Q9Y2P7 627 aaPredicted RBP5.22□□□□□ -1.57
VPS13A-201ENST00000355766 HECTD4Q9Y4D8 3996 aa5.22□□□□□ -1.57
VPS13A-201ENST00000355766 TRAV2A0A0B4J234 112 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 IGHV7-4-1A0A0J9YVY3 117 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 FAM231BA6NCW3 169 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 PGPA6NDG6 321 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 SCO1O75880 301 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 IGHV3-23P01764 117 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 TYMSP04818 313 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 RPEL1Q2QD12 228 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 COX19Q49B96 90 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 SAPCD1Q5SSQ6 148 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 LEMD1Q68G75 181 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 TMEM88Q6PEY1 159 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 Q86TA4 180 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 TMEM183AQ8IXX5 376 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 KLHL30-AS1Q8NEE0 82 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 BLNKQ8WV28 456 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 PYGO2Q9BRQ0 406 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 DERL1Q9BUN8 251 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 SAV1Q9H4B6 383 aaPredicted RBP5.21□□□□□ -1.58
VPS13A-201ENST00000355766 ZNF492Q9P255 531 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 LINC00527Q9UJ94 153 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 LENEPQ9Y5L5 61 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 S4R3C0 116 aa5.21□□□□□ -1.58
VPS13A-201ENST00000355766 COLCA2A8K830 154 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 ZNF785A8K8V0 405 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 PPP5D1E7EU14 171 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 FRMD6-AS1P0C7T7 363 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 FAM3BP58499 235 aaPredicted RBP5.2□□□□□ -1.58
VPS13A-201ENST00000355766 ELOBQ15370 118 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 PSG3Q16557 428 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 RASL11AQ6T310 242 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 BAGE2Q86Y30 109 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 OR4B1Q8NGF8 309 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 OR10G8Q8NGN5 311 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 OCC1Q8TAD7 63 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 DUX3Q96PT4 197 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 TM2D3Q9BRN9 247 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 C20orf24Q9BUV8 137 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 GFRA4Q9GZZ7 299 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 NRN1Q9NPD7 142 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 MLXQ9UH92 298 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 SMPXQ9UHP9 88 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 KIAA1109Q2LD37 5005 aa5.2□□□□□ -1.58
VPS13A-201ENST00000355766 TMEM213A2RRL7 107 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 K7EN84 100 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 CCL24O00175 119 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 SLC17A3O00476 420 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 SOCS3O14543 225 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 IGLV2-11P01706 119 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 IGLV2-8P01709 118 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 TRBV12-3P01733 135 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 IGHV3-11P01762 117 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 PFN1P07737 140 aaKnown RBP5.19□□□□□ -1.58
VPS13A-201ENST00000355766 RAB5AP20339 215 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 FLI1Q01543 452 aaPredicted RBP5.19□□□□□ -1.58
VPS13A-201ENST00000355766 FHL3Q13643 280 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 KLF5Q13887 457 aaPredicted RBP5.19□□□□□ -1.58
VPS13A-201ENST00000355766 Q6AWC8 147 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 UNQ9165/PRO28630Q6UXU0 137 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 NDFIP1Q9BT67 221 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 SIGLEC8Q9NYZ4 499 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 PEMTQ9UBM1 199 aa5.19□□□□□ -1.58
VPS13A-201ENST00000355766 F5H697 171 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 LINC01619G3V211 115 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 OVOL1O14753 267 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 CHEK1O14757 476 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 MT-ND6P03923 174 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 CT45A10P0DMU9 189 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 ID1P41134 155 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 ERVFC1-1P60608 527 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 IBA57Q5T440 356 aaKnown RBP5.18□□□□□ -1.58
VPS13A-201ENST00000355766 GOLT1AQ6ZVE7 132 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 C17orf77Q96MU5 243 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 ODF3Q96PU9 254 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 RHPN1-AS1Q9BWJ2 59 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 IL36BQ9NZH7 164 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 V9GYV3 84 aa5.18□□□□□ -1.58
VPS13A-201ENST00000355766 SMIM27A0A1W2PRY6 76 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 ZNF320A2RRD8 509 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 XKRY2A2RUG3 117 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 C19orf71A6NCJ1 209 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 RAB5BP61020 215 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms