RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 KLK9Q9UKQ9 250 aa4.15□□□□□ -1.75
CD47-201ENST00000355354 IGHV3-64A0A075B6Q5 118 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 TMEM155Q4W5P6 130 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 UFSP1Q6NVU6 142 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 RNASEKQ6P5S7 137 aaKnown RBP4.14□□□□□ -1.75
CD47-201ENST00000355354 Q6ZN92 141 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 Q8N2B8 174 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 CORO2AQ92828 525 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 C20orf144Q9BQM9 153 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 RABAC1Q9UI14 185 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 IGHV2-26A0A0B4J1V2 119 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 OR4C46A6NHA9 309 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 NDUFS8O00217 210 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 TCEAL7Q9BRU2 100 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 BPESC1Q9GZL8 116 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 IL4P05112 153 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 GLRXP35754 106 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 PSMB3P49720 205 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 ETDBQ3ZM63 59 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 TMEM30CPA0ZSE6 113 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 KNCNA6PVL3 124 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 PET100P0DJ07 73 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 FAM71F2Q6NXP2 309 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 Q8N9W7 124 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 AMELXQ99217 191 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 Q9H3A6 140 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 RNF7Q9UBF6 113 aa4.14□□□□□ -1.75
CD47-201ENST00000355354 IGHV1-3A0A0C4DH29 117 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 SYS1-DBNDD2H3BUS1 97 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 TNFSF4P23510 183 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 RNF151Q2KHN1 245 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 ZNF833PQ6ZTB9 187 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 HTD2P86397 168 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 EIF5AL1Q6IS14 154 aaKnown RBP4.13□□□□□ -1.75
CD47-201ENST00000355354 TMEM108Q6UXF1 575 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 GTSCR1Q86UQ5 136 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 RASL10AQ92737 203 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 PERPQ96FX8 193 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 MIEN1Q9BRT3 115 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 ZFAND3Q9H8U3 227 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 UBTD1Q9HAC8 227 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 MRPL27Q9P0M9 148 aaKnown RBP4.13□□□□□ -1.75
CD47-201ENST00000355354 PEX7O00628 323 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 UBE2NP61088 152 aaKnown RBP4.13□□□□□ -1.75
CD47-201ENST00000355354 MRPL51Q4U2R6 128 aaKnown RBP4.13□□□□□ -1.75
CD47-201ENST00000355354 PPP1R27Q86WC6 154 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 BAGE3Q86Y29 109 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 SLC35E1Q96K37 410 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 PRO0461Q9UI25 63 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 IGHV2-70DA0A0C4DH43 119 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 OOEPA6NGQ2 149 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 SLC25A16P16260 332 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 DSCR9P59020 149 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 PDLIM3Q53GG5 364 aaPredicted RBP4.13□□□□□ -1.75
CD47-201ENST00000355354 TCTEX1D4Q5JR98 221 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 TECTBQ96PL2 329 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 CITED1Q99966 193 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 SLC25A10Q9UBX3 287 aaPredicted RBP4.13□□□□□ -1.75
CD47-201ENST00000355354 EPDR1Q9UM22 224 aa4.13□□□□□ -1.75
CD47-201ENST00000355354 RBMY1BA6NDE4 496 aaKnown RBP4.12□□□□□ -1.75
CD47-201ENST00000355354 RBMY1EA6NEQ0 496 aaKnown RBP4.12□□□□□ -1.75
CD47-201ENST00000355354 RBMY1DP0C7P1 496 aaKnown RBP4.12□□□□□ -1.75
CD47-201ENST00000355354 ECI1P42126 302 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 HILS1P60008 231 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 C16orf54Q6UWD8 224 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 NRACQ8N912 160 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 BEND2Q8NDZ0 799 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 ARPC1AQ92747 370 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 COX11Q9Y6N1 276 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 OR1L4Q8NGR5 311 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 ZNRF2Q8NHG8 242 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 KLF12Q9Y4X4 402 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 A0A1W2PPV4 95 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 RNASE3P12724 160 aaKnown RBP4.12□□□□□ -1.75
CD47-201ENST00000355354 S100A2P29034 98 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 MRPL35Q9NZE8 188 aaKnown RBP4.12□□□□□ -1.75
CD47-201ENST00000355354 TRAV8-3A0A0A6YYJ7 113 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 IGHV3-73A0A0B4J1V6 119 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 M0R2Z0 102 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 GPR183P32249 361 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 LYZP61626 148 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 SCGB1C1Q8TD33 95 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 LINC00574Q9H8X3 128 aa4.12□□□□□ -1.75
CD47-201ENST00000355354 ATP6V0E1O15342 81 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 CLEC3BP05452 202 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 LGALS7P47929 136 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 ADAMTSL4-AS1Q5T5F5 129 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 CARD19Q96LW7 228 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 TRGV10A0A0A0MS01 117 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 TRAV40A0A0B4J280 105 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 B4DSR2 109 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 PAFAH1B2P68402 229 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 POM121L12Q8N7R1 296 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 OR1N2Q8NGR9 330 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 DPF1Q92782 380 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 RAB1CQ92928 201 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 C10orf35Q96D05 121 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 TM2D2Q9BX73 214 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 GTSF1LQ9H1H1 148 aa4.11□□□□□ -1.75
CD47-201ENST00000355354 CST9LQ9H4G1 147 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms