RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 RHOHQ15669 191 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 TRBV6-6A0A0A6YYG2 114 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 RNASE13Q5GAN3 156 aaKnown RBP4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 GPR179Q6PRD1 2367 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 CR1LQ2VPA4 569 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 TEX36Q5VZQ5 186 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 F8W1H4 67 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 OR11H6Q8NGC7 330 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 MRPL51Q4U2R6 128 aaKnown RBP4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 BVES-AS1Q5T3Y7 98 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 CRYBA4P53673 196 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 ZNF492Q9P255 531 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 GFI1Q99684 422 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 CCDC168Q8NDH2 2452 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 IGHG2P01859 326 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 SRSF2Q01130 221 aaKnown RBP4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 ORMDL1Q9P0S3 153 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 HLA-DMBP28068 263 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 YPEL3P61236 119 aaPredicted RBP4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 NCOR1P1Q9H4R4 102 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 WFDC9Q8NEX5 89 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 G3V318 75 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 TIRAPP58753 221 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 C5orf24Q7Z6I8 188 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 C14orf132Q9NPU4 83 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 IGLV2-23P01705 113 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 MP68P56378 58 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 TMEM14BQ9NUH8 114 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 LTBP4Q8N2S1 1624 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 A8MWP6 167 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 Q6ZQT7 251 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 SBF1O95248 1867 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 PRB2P02812 416 aaPredicted RBP4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 VWCEQ96DN2 955 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 CYTL1Q9NRR1 136 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 RALGAPA2Q2PPJ7 1873 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 TANC2Q9HCD6 1990 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 CACNA1AO00555 2505 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 CSPG4Q6UVK1 2322 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 PYY3Q5JQD4 70 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 LCTP09848 1927 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 J3QLI3 93 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 LYPD3O95274 346 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 MRPL53Q96EL3 112 aaKnown RBP4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 F8VRH5 84 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 J3QQQ9 107 aa4.63□□□□□ -1.67
SRGAP1-201ENST00000355086 CCL18P55774 89 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 BOD1L2Q8IYS8 172 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 MESP1Q9BRJ9 268 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 PNRC2Q9NPJ4 139 aaKnown RBP4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 FLVCR1-AS1Q8TAF5 88 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 TRBV19A0A075B6N1 114 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 BAALC-AS2P0C853 105 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 CFPP27918 469 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 SVIPQ8NHG7 77 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 Q6ZS92 163 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 POLR3KQ9Y2Y1 108 aaPredicted RBP4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 MRPL35Q9NZE8 188 aaKnown RBP4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 TTC28Q96AY4 2481 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 IGLL5B9A064 214 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 CCL24O00175 119 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 Q0VG73 95 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 J3QKU1 62 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 LGALS9BQ3B8N2 356 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 LGALS9CQ6DKI2 356 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 UBE2AP49459 152 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 U3KQE9 123 aa4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 HELZP42694 1942 aaKnown RBP4.62□□□□□ -1.67
SRGAP1-201ENST00000355086 A0A1B0GUS0 222 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 CAMK2N2Q96S95 79 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 ARID2Q68CP9 1835 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 SLC25A29Q8N8R3 303 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 C15orf53Q8NAA6 179 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 C18orf32Q8TCD1 76 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 SIGLEC8Q9NYZ4 499 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 K7ENP7 123 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 ETDBQ3ZM63 59 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 A0A1B0GX51 115 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 F6UB75 175 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 K7ERJ3 54 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 COX8AP10176 69 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 MRPL36Q9P0J6 103 aaKnown RBP4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 IGKV2-29A2NJV5 120 aaPredicted RBP4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 NDUFA4L2Q9NRX3 87 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 LOC285556D6RIA3 1793 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 HIVEP2P31629 2446 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 COX7B2Q8TF08 81 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 Q9H8V8 135 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 ICOSQ9Y6W8 199 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 H3BMG7 143 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 SPANXCQ9NY87 97 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 H3BQ85 93 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 HERV-K104P63124 156 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 BDP1A6H8Y1 2624 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 ELANEP08246 267 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 Q6ZS49 121 aa4.61□□□□□ -1.67
SRGAP1-201ENST00000355086 C5orf63A6NC05 138 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 ZNF833PQ6ZTB9 187 aa4.6□□□□□ -1.67
SRGAP1-201ENST00000355086 SEM1Q6ZVN7 128 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms