RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 GLRXP35754 106 aa10.28□□□□□ -0.76
IFT88-202ENST00000351808 U3KQA8 63 aa10.28□□□□□ -0.76
IFT88-202ENST00000351808 IL11RAQ14626 422 aa10.28□□□□□ -0.76
IFT88-202ENST00000351808 LYPD1Q8N2G4 141 aa10.28□□□□□ -0.76
IFT88-202ENST00000351808 SHANK2-AS3Q9BTD1 123 aa10.28□□□□□ -0.76
IFT88-202ENST00000351808 DNAJC30Q96LL9 226 aa10.27□□□□□ -0.77
IFT88-202ENST00000351808 CCL13Q99616 98 aa10.27□□□□□ -0.77
IFT88-202ENST00000351808 PRO1854Q9UHT4 67 aa10.27□□□□□ -0.77
IFT88-202ENST00000351808 TRAV12-1A0A0B4J245 112 aa10.27□□□□□ -0.77
IFT88-202ENST00000351808 H7C2G1 150 aa10.27□□□□□ -0.77
IFT88-202ENST00000351808 TRGV3P03979 118 aa10.27□□□□□ -0.77
IFT88-202ENST00000351808 TDHQ8IZJ6 230 aa10.27□□□□□ -0.77
IFT88-202ENST00000351808 FAM216BQ8N7L0 139 aa10.27□□□□□ -0.77
IFT88-202ENST00000351808 CECR9P0C854 216 aa10.26□□□□□ -0.77
IFT88-202ENST00000351808 COX6B1P14854 86 aa10.26□□□□□ -0.77
IFT88-202ENST00000351808 MRGPRG-AS1Q2M3A8 158 aa10.26□□□□□ -0.77
IFT88-202ENST00000351808 K7ESF4 209 aa10.26□□□□□ -0.77
IFT88-202ENST00000351808 PLGLAQ15195 96 aa10.26□□□□□ -0.77
IFT88-202ENST00000351808 MSMPQ1L6U9 139 aa10.26□□□□□ -0.77
IFT88-202ENST00000351808 Q6ZS46 218 aa10.26□□□□□ -0.77
IFT88-202ENST00000351808 SCGB3A1Q96QR1 104 aa10.26□□□□□ -0.77
IFT88-202ENST00000351808 IGHV3-72A0A0B4J1Y9 119 aa10.25□□□□□ -0.77
IFT88-202ENST00000351808 A0A0J9YY99 117 aa10.25□□□□□ -0.77
IFT88-202ENST00000351808 IGKV1-17P01599 117 aa10.25□□□□□ -0.77
IFT88-202ENST00000351808 MZT1Q08AG7 82 aa10.25□□□□□ -0.77
IFT88-202ENST00000351808 MRPL23Q16540 153 aaKnown RBP10.25□□□□□ -0.77
IFT88-202ENST00000351808 WDFY4Q6ZS81 3184 aa10.25□□□□□ -0.77
IFT88-202ENST00000351808 SMIM9A6NGZ8 99 aa10.25□□□□□ -0.77
IFT88-202ENST00000351808 H3BRN7 92 aa10.25□□□□□ -0.77
IFT88-202ENST00000351808 SPRY3O43610 288 aa10.25□□□□□ -0.77
IFT88-202ENST00000351808 ENSAO43768 121 aaKnown RBP10.25□□□□□ -0.77
IFT88-202ENST00000351808 CEACAM4O75871 244 aa10.25□□□□□ -0.77
IFT88-202ENST00000351808 NRACQ8N912 160 aa10.25□□□□□ -0.77
IFT88-202ENST00000351808 CNFNQ9BYD5 112 aa10.25□□□□□ -0.77
IFT88-202ENST00000351808 TIMM23O14925 209 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 MRPS12O15235 138 aaKnown RBP10.24□□□□□ -0.77
IFT88-202ENST00000351808 DUSP14O95147 198 aaKnown RBP10.24□□□□□ -0.77
IFT88-202ENST00000351808 IGKV3-15P01624 115 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 RPL7P18124 248 aaKnown RBP10.24□□□□□ -0.77
IFT88-202ENST00000351808 RPL27AP46776 148 aaKnown RBP10.24□□□□□ -0.77
IFT88-202ENST00000351808 VMA21Q3ZAQ7 101 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 PVRIGQ6DKI7 326 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 NEXN-AS1Q8NBZ9 246 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 DEFB127Q9H1M4 99 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 B9A039 149 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 LHBP01229 141 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 IGHV3-30P01768 117 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 IGHV3-30-5P0DP03 117 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 CD40P25942 277 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 HLA-DMBP28068 263 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 ZNF56Q15929 161 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 OOSP1A8MZH6 123 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 ELANEP08246 267 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 CCL3L1P16619 93 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 IGFL4Q6B9Z1 124 aa10.24□□□□□ -0.77
IFT88-202ENST00000351808 MUC3AQ02505 3323 aa10.23□□□□□ -0.77
IFT88-202ENST00000351808 IGHV4-39P01824 125 aa10.23□□□□□ -0.77
IFT88-202ENST00000351808 GAFA1Q96PS6 74 aa10.23□□□□□ -0.77
IFT88-202ENST00000351808 LINC00574Q9H8X3 128 aa10.23□□□□□ -0.77
IFT88-202ENST00000351808 LGALS9O00182 355 aa10.22□□□□□ -0.77
IFT88-202ENST00000351808 LINC01620Q4KN68 170 aa10.22□□□□□ -0.77
IFT88-202ENST00000351808 MED13Q9UHV7 2174 aa10.22□□□□□ -0.77
IFT88-202ENST00000351808 DCHS1Q96JQ0 3298 aa10.22□□□□□ -0.77
IFT88-202ENST00000351808 WT1P19544 449 aaPredicted RBP10.22□□□□□ -0.77
IFT88-202ENST00000351808 CNTFRP26992 372 aa10.22□□□□□ -0.77
IFT88-202ENST00000351808 EMP1P54849 157 aa10.22□□□□□ -0.77
IFT88-202ENST00000351808 FAM19A5Q7Z5A7 132 aaPredicted RBP10.22□□□□□ -0.77
IFT88-202ENST00000351808 PSMG3-AS1Q96PY0 264 aa10.22□□□□□ -0.77
IFT88-202ENST00000351808 IGFBP4P22692 258 aa10.21□□□□□ -0.77
IFT88-202ENST00000351808 COX8CQ7Z4L0 72 aa10.21□□□□□ -0.77
IFT88-202ENST00000351808 ZNF491Q8N8L2 437 aa10.21□□□□□ -0.77
IFT88-202ENST00000351808 BAALCQ8WXS3 180 aa10.21□□□□□ -0.77
IFT88-202ENST00000351808 TIMD4Q96H15 378 aa10.21□□□□□ -0.77
IFT88-202ENST00000351808 H3BMM0 161 aa10.21□□□□□ -0.78
IFT88-202ENST00000351808 RPL13AP40429 203 aaKnown RBP10.21□□□□□ -0.78
IFT88-202ENST00000351808 TCF15Q12870 199 aa10.21□□□□□ -0.78
IFT88-202ENST00000351808 C9orf153Q5TBE3 101 aa10.21□□□□□ -0.78
IFT88-202ENST00000351808 UBE2WQ96B02 151 aa10.21□□□□□ -0.78
IFT88-202ENST00000351808 RNF125Q96EQ8 232 aa10.21□□□□□ -0.78
IFT88-202ENST00000351808 BEX4Q9NWD9 120 aaPredicted RBP10.21□□□□□ -0.78
IFT88-202ENST00000351808 KLK5Q9Y337 293 aaPredicted RBP10.21□□□□□ -0.78
IFT88-202ENST00000351808 TRAV25A0A0B4J276 109 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 NPFFO15130 113 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 EIF4EBP3O60516 100 aaPredicted RBP10.2□□□□□ -0.78
IFT88-202ENST00000351808 IGHV3-33P01772 117 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 UBTD1Q9HAC8 227 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 RAI1Q7Z5J4 1906 aaPredicted RBP10.2□□□□□ -0.78
IFT88-202ENST00000351808 DMDP11532 3685 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 TM4SF5O14894 197 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 HES1Q14469 280 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 ADIPOQQ15848 244 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 S4R3C0 116 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 FAM236AA0A1B0GUQ0 79 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 FAM236BA0A1B0GV22 79 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 A4D1N5 150 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 I3L2K1 104 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 CNEP1R1Q8N9A8 125 aa10.2□□□□□ -0.78
IFT88-202ENST00000351808 TMEM190Q8WZ59 177 aa10.19□□□□□ -0.78
IFT88-202ENST00000351808 TOMM6Q96B49 74 aa10.19□□□□□ -0.78
IFT88-202ENST00000351808 DUX3Q96PT4 197 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms