RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 IGHV7-81A0A0B4J1V7 117 aa9.6□□□□□ -0.87
SMAD9-201ENST00000350148 ZNF491Q8N8L2 437 aa9.6□□□□□ -0.87
SMAD9-201ENST00000350148 LMO4P61968 165 aa9.6□□□□□ -0.87
SMAD9-201ENST00000350148 FXYD5Q96DB9 178 aa9.6□□□□□ -0.87
SMAD9-201ENST00000350148 STPG4Q8N801 248 aa9.59□□□□□ -0.87
SMAD9-201ENST00000350148 Q8N9W7 124 aa9.59□□□□□ -0.87
SMAD9-201ENST00000350148 ZFP36P26651 326 aaKnown RBP9.59□□□□□ -0.87
SMAD9-201ENST00000350148 LINC01587Q99440 93 aa9.59□□□□□ -0.87
SMAD9-201ENST00000350148 MRPL27Q9P0M9 148 aaKnown RBP9.59□□□□□ -0.87
SMAD9-201ENST00000350148 M0R381 172 aa9.59□□□□□ -0.87
SMAD9-201ENST00000350148 LGALS1P09382 135 aaKnown RBP9.59□□□□□ -0.87
SMAD9-201ENST00000350148 ASPHD1Q5U4P2 390 aa9.59□□□□□ -0.87
SMAD9-201ENST00000350148 PRSS57Q6UWY2 283 aa9.59□□□□□ -0.87
SMAD9-201ENST00000350148 TNRC6AQ8NDV7 1962 aaKnown RBP9.59□□□□□ -0.87
SMAD9-201ENST00000350148 SH2D1AO60880 128 aa9.59□□□□□ -0.87
SMAD9-201ENST00000350148 IGLC2P0DOY2 106 aa9.59□□□□□ -0.87
SMAD9-201ENST00000350148 IGLC3P0DOY3 106 aa9.59□□□□□ -0.87
SMAD9-201ENST00000350148 FOXE3Q13461 319 aa9.59□□□□□ -0.87
SMAD9-201ENST00000350148 KLHL30-AS1Q8NEE0 82 aa9.59□□□□□ -0.87
SMAD9-201ENST00000350148 CACNA1GO43497 2377 aa9.59□□□□□ -0.87
SMAD9-201ENST00000350148 OVOL3O00110 214 aa9.58□□□□□ -0.88
SMAD9-201ENST00000350148 PRB4P10163 310 aaPredicted RBP9.58□□□□□ -0.88
SMAD9-201ENST00000350148 DEFB112Q30KQ8 113 aa9.58□□□□□ -0.88
SMAD9-201ENST00000350148 TMEM86BQ8N661 226 aa9.58□□□□□ -0.88
SMAD9-201ENST00000350148 SCGB3A1Q96QR1 104 aa9.58□□□□□ -0.88
SMAD9-201ENST00000350148 MALRD1Q5VYJ5 2156 aa9.58□□□□□ -0.88
SMAD9-201ENST00000350148 IGKV3-20P01619 116 aa9.58□□□□□ -0.88
SMAD9-201ENST00000350148 A0A1W2PRX2 142 aa9.58□□□□□ -0.88
SMAD9-201ENST00000350148 IGKCP01834 107 aa9.58□□□□□ -0.88
SMAD9-201ENST00000350148 PRB1P04280 392 aa9.58□□□□□ -0.88
SMAD9-201ENST00000350148 TEX22C9J3V5 150 aa9.58□□□□□ -0.88
SMAD9-201ENST00000350148 NUPR1O60356 82 aa9.58□□□□□ -0.88
SMAD9-201ENST00000350148 HBDP02042 147 aa9.58□□□□□ -0.88
SMAD9-201ENST00000350148 C5orf56Q8N8D9 126 aa9.58□□□□□ -0.88
SMAD9-201ENST00000350148 CHD3Q12873 2000 aaKnown RBP9.58□□□□□ -0.88
SMAD9-201ENST00000350148 CD7P09564 240 aa9.57□□□□□ -0.88
SMAD9-201ENST00000350148 C16orf54Q6UWD8 224 aa9.57□□□□□ -0.88
SMAD9-201ENST00000350148 GGTLC3B5MD39 225 aa9.57□□□□□ -0.88
SMAD9-201ENST00000350148 K7EIM0 57 aa9.57□□□□□ -0.88
SMAD9-201ENST00000350148 DYSFO75923 2080 aa9.57□□□□□ -0.88
SMAD9-201ENST00000350148 SHANK1Q9Y566 2161 aa9.57□□□□□ -0.88
SMAD9-201ENST00000350148 RBAKDNA6NC62 111 aa9.57□□□□□ -0.88
SMAD9-201ENST00000350148 TNFRSF18Q9Y5U5 241 aa9.57□□□□□ -0.88
SMAD9-201ENST00000350148 ZNF815PA8K554 130 aa9.57□□□□□ -0.88
SMAD9-201ENST00000350148 C9JAW5 83 aa9.57□□□□□ -0.88
SMAD9-201ENST00000350148 PFN1P07737 140 aaKnown RBP9.57□□□□□ -0.88
SMAD9-201ENST00000350148 LCNL1Q6ZST4 164 aa9.57□□□□□ -0.88
SMAD9-201ENST00000350148 Q6ZWC4 215 aa9.57□□□□□ -0.88
SMAD9-201ENST00000350148 LENEPQ9Y5L5 61 aa9.57□□□□□ -0.88
SMAD9-201ENST00000350148 IGHV3OR16-12A0A075B7B8 117 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 IGHV7-4-1A0A0J9YVY3 117 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 TNFRSF13BO14836 293 aaPredicted RBP9.56□□□□□ -0.88
SMAD9-201ENST00000350148 UBE2L6O14933 153 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 ZNF688P0C7X2 276 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 MRPL23Q16540 153 aaKnown RBP9.56□□□□□ -0.88
SMAD9-201ENST00000350148 MRPL55Q7Z7F7 128 aaKnown RBP9.56□□□□□ -0.88
SMAD9-201ENST00000350148 GTSCR1Q86UQ5 136 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 NUP35Q8NFH5 326 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 PCNX1Q96RV3 2341 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 KMT2EQ8IZD2 1858 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 C19orf84I3L1E1 186 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 PROP1O75360 226 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 EBI3Q14213 229 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 ARHGAP21Q5T5U3 1957 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 TRBV7-9A0A0J9YWB2 115 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 ORMDL2Q53FV1 153 aa9.56□□□□□ -0.88
SMAD9-201ENST00000350148 MCRIP2Q9BUT9 160 aaKnown RBP9.56□□□□□ -0.88
SMAD9-201ENST00000350148 USF3Q68DE3 2245 aa9.55□□□□□ -0.88
SMAD9-201ENST00000350148 NDPQ00604 133 aa9.55□□□□□ -0.88
SMAD9-201ENST00000350148 RBM3P98179 157 aaKnown RBP9.55□□□□□ -0.88
SMAD9-201ENST00000350148 A0A1W2PPM0 123 aa9.55□□□□□ -0.88
SMAD9-201ENST00000350148 IGHV4-38-2P0DP08 117 aa9.55□□□□□ -0.88
SMAD9-201ENST00000350148 BRWD1-AS2P59051 145 aa9.55□□□□□ -0.88
SMAD9-201ENST00000350148 FAM74A4Q5TZK3 123 aa9.55□□□□□ -0.88
SMAD9-201ENST00000350148 IFI27L1Q96BM0 104 aa9.55□□□□□ -0.88
SMAD9-201ENST00000350148 LY6LH3BQJ8 138 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 SRSF1Q07955 248 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMAD9-201ENST00000350148 C8orf86Q6ZUL3 223 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 ZNF843Q8N446 348 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 ANKRD29Q8N6D5 301 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 H3BMM0 161 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 SYS1-DBNDD2H3BUS1 97 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 SAP30O75446 220 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 IGHG2P01859 326 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 SYNJ2BPP57105 145 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 UBE2WQ96B02 151 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 DOCK11Q5JSL3 2073 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 RITA1Q96K30 269 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 WI2-2373I1.2A0A1W2PRP0 233 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 LYZL1Q6UWQ5 148 aa9.54□□□□□ -0.88
SMAD9-201ENST00000350148 A6NDX4 124 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 SMPXQ9UHP9 88 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 IGHV4-59P01825 116 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 IL17RELQ6ZVW7 336 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.53□□□□□ -0.88
SMAD9-201ENST00000350148 M0R2P5 195 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 INSP01308 110 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 NSUN5P1Q3KNT7 163 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 PTPRQQ9UMZ3 2332 aa9.53□□□□□ -0.88
SMAD9-201ENST00000350148 IGKV1-17P01599 117 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms