RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CECR9P0C854 216 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 MZT1Q08AG7 82 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 ZNF672Q499Z4 452 aaPredicted RBP8.31□□□□□ -1.08
CAPN3-203ENST00000349748 C6orf15Q6UXA7 325 aaPredicted RBP8.31□□□□□ -1.08
CAPN3-203ENST00000349748 MDP1Q86V88 176 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 KLHL30-AS1Q8NEE0 82 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 CFC1BP0CG36 223 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 CFC1P0CG37 223 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 C10orf55Q5SWW7 151 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 RPS19BP1Q86WX3 136 aaKnown RBP8.31□□□□□ -1.08
CAPN3-203ENST00000349748 C17orf77Q96MU5 243 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 ELANEP08246 267 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 LOXL3P58215 753 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 OR13C6PQ8NH95 151 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 RNF185Q96GF1 192 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 ZNRD1Q9P1U0 126 aa8.31□□□□□ -1.08
CAPN3-203ENST00000349748 PLNP26678 52 aa8.3□□□□□ -1.08
CAPN3-203ENST00000349748 MYOZ3Q8TDC0 251 aa8.3□□□□□ -1.08
CAPN3-203ENST00000349748 OTORQ9NRC9 128 aa8.3□□□□□ -1.08
CAPN3-203ENST00000349748 DSPP15924 2871 aaKnown RBP8.3□□□□□ -1.08
CAPN3-203ENST00000349748 ZFHX4Q86UP3 3567 aa8.3□□□□□ -1.08
CAPN3-203ENST00000349748 M0R2P5 195 aa8.3□□□□□ -1.08
CAPN3-203ENST00000349748 SLC25A16P16260 332 aa8.3□□□□□ -1.08
CAPN3-203ENST00000349748 FOLR3P41439 243 aa8.3□□□□□ -1.08
CAPN3-203ENST00000349748 C4orf26Q17RF5 130 aa8.3□□□□□ -1.08
CAPN3-203ENST00000349748 C3orf22Q8N5N4 141 aa8.3□□□□□ -1.08
CAPN3-203ENST00000349748 ZNF71Q9NQZ8 489 aaPredicted RBP8.3□□□□□ -1.08
CAPN3-203ENST00000349748 DNAJC13O75165 2243 aa8.29□□□□□ -1.08
CAPN3-203ENST00000349748 SAA1P0DJI8 122 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-203ENST00000349748 PMVKQ15126 192 aa8.29□□□□□ -1.08
CAPN3-203ENST00000349748 CD177Q8N6Q3 437 aa8.29□□□□□ -1.08
CAPN3-203ENST00000349748 RPUSD1Q9UJJ7 312 aaKnown RBP8.29□□□□□ -1.08
CAPN3-203ENST00000349748 PINLYPA6NC86 204 aa8.29□□□□□ -1.08
CAPN3-203ENST00000349748 K7EM74 188 aa8.29□□□□□ -1.08
CAPN3-203ENST00000349748 IGHV4-39P01824 125 aa8.29□□□□□ -1.08
CAPN3-203ENST00000349748 WT1-ASQ06250 92 aa8.29□□□□□ -1.08
CAPN3-203ENST00000349748 LY6DQ14210 128 aa8.29□□□□□ -1.08
CAPN3-203ENST00000349748 TIMD4Q96H15 378 aa8.29□□□□□ -1.08
CAPN3-203ENST00000349748 MRPL20Q9BYC9 149 aaKnown RBP8.29□□□□□ -1.08
CAPN3-203ENST00000349748 KLK15Q9H2R5 256 aa8.29□□□□□ -1.08
CAPN3-203ENST00000349748 NXT2Q9NPJ8 142 aaKnown RBP8.29□□□□□ -1.08
CAPN3-203ENST00000349748 MAP1BP46821 2468 aaKnown RBP8.29□□□□□ -1.08
CAPN3-203ENST00000349748 TPRP12270 2363 aaKnown RBP8.29□□□□□ -1.08
CAPN3-203ENST00000349748 LAMA5O15230 3695 aa8.28□□□□□ -1.08
CAPN3-203ENST00000349748 M0R3E3 92 aa8.28□□□□□ -1.08
CAPN3-203ENST00000349748 LGALS9O00182 355 aa8.28□□□□□ -1.08
CAPN3-203ENST00000349748 HOXB4P17483 251 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-203ENST00000349748 ERHP84090 104 aaKnown RBP8.28□□□□□ -1.08
CAPN3-203ENST00000349748 HRCT1Q6UXD1 115 aa8.28□□□□□ -1.08
CAPN3-203ENST00000349748 PLXNB1O43157 2135 aa8.28□□□□□ -1.08
CAPN3-203ENST00000349748 DUX3Q96PT4 197 aa8.28□□□□□ -1.08
CAPN3-203ENST00000349748 INS-IGF2F8WCM5 200 aa8.28□□□□□ -1.08
CAPN3-203ENST00000349748 SH2D1AO60880 128 aa8.28□□□□□ -1.08
CAPN3-203ENST00000349748 CD3EP07766 207 aa8.28□□□□□ -1.08
CAPN3-203ENST00000349748 Q0VFX4 171 aa8.28□□□□□ -1.08
CAPN3-203ENST00000349748 POU2AF1Q16633 256 aa8.28□□□□□ -1.08
CAPN3-203ENST00000349748 ATP1A1-AS1Q5TC04 95 aa8.28□□□□□ -1.08
CAPN3-203ENST00000349748 CHD8Q9HCK8 2581 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 LINC01546A6NGU7 62 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 F8VRH5 84 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 APELAP0DMC3 54 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 ZNF22P17026 224 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-203ENST00000349748 ATP5IP56385 69 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-203ENST00000349748 Q6ZS46 218 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 ZCCHC24Q8N2G6 241 aaKnown RBP8.27□□□□□ -1.09
CAPN3-203ENST00000349748 OR4C13Q8NGP0 309 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 SLC25A39Q9BZJ4 359 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-203ENST00000349748 ACACAQ13085 2346 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 SPENQ96T58 3664 aaKnown RBP8.27□□□□□ -1.09
CAPN3-203ENST00000349748 AKAP13Q12802 2813 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 H7C1H1 209 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 POM121L12Q8N7R1 296 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 THAP8Q8NA92 274 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 CITED2Q99967 270 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-203ENST00000349748 NDUFA4L2Q9NRX3 87 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 BEX4Q9NWD9 120 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-203ENST00000349748 PRO1854Q9UHT4 67 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 LOC400499M0QZD8 3231 aa8.27□□□□□ -1.09
CAPN3-203ENST00000349748 ZGRF1Q86YA3 2104 aa8.26□□□□□ -1.09
CAPN3-203ENST00000349748 A0A1B0GX51 115 aa8.26□□□□□ -1.09
CAPN3-203ENST00000349748 H3BMM0 161 aa8.26□□□□□ -1.09
CAPN3-203ENST00000349748 UBE2WQ96B02 151 aa8.26□□□□□ -1.09
CAPN3-203ENST00000349748 LYZP61626 148 aa8.26□□□□□ -1.09
CAPN3-203ENST00000349748 HCP5Q6MZN7 132 aa8.26□□□□□ -1.09
CAPN3-203ENST00000349748 TMEM75Q8N9X5 138 aa8.26□□□□□ -1.09
CAPN3-203ENST00000349748 ZNRF1Q8ND25 227 aa8.26□□□□□ -1.09
CAPN3-203ENST00000349748 KIR2DL5BQ8NHK3 375 aa8.26□□□□□ -1.09
CAPN3-203ENST00000349748 LINC00527Q9UJ94 153 aa8.26□□□□□ -1.09
CAPN3-203ENST00000349748 APC2O95996 2303 aa8.26□□□□□ -1.09
CAPN3-203ENST00000349748 CACNA1GO43497 2377 aa8.26□□□□□ -1.09
CAPN3-203ENST00000349748 IGLV2-18A0A075B6J9 118 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 TRAV26-2A0A0B4J265 109 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 EGR2P11161 476 aaPredicted RBP8.25□□□□□ -1.09
CAPN3-203ENST00000349748 LINC01620Q4KN68 170 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 Q8N8P6 123 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 DMXL2Q8TDJ6 3036 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 IGF2RP11717 2491 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 TRBV7-7A0A0K0K1E9 115 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 PRDX2P32119 198 aa8.25□□□□□ -1.09
CAPN3-203ENST00000349748 RPL13AP40429 203 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms