RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
RAB5C-201ENST00000346213 C17orf77Q96MU5 243 aa11.79□□□□□ -0.52
RAB5C-201ENST00000346213 METTL26Q96S19 204 aa11.79□□□□□ -0.52
RAB5C-201ENST00000346213 ISLRO14498 428 aa11.78□□□□□ -0.52
RAB5C-201ENST00000346213 GIG44P09565 113 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-201ENST00000346213 KCNIP4Q6PIL6 250 aa11.78□□□□□ -0.52
RAB5C-201ENST00000346213 BAGE2Q86Y30 109 aa11.78□□□□□ -0.52
RAB5C-201ENST00000346213 CMTM2Q8TAZ6 248 aa11.78□□□□□ -0.52
RAB5C-201ENST00000346213 FMC1Q96HJ9 113 aa11.78□□□□□ -0.52
RAB5C-201ENST00000346213 OSTCQ9NRP0 149 aa11.78□□□□□ -0.52
RAB5C-201ENST00000346213 TRAV34A0A0B4J273 112 aa11.78□□□□□ -0.52
RAB5C-201ENST00000346213 DEFB1P60022 68 aa11.78□□□□□ -0.52
RAB5C-201ENST00000346213 UBE2G1P62253 170 aa11.78□□□□□ -0.52
RAB5C-201ENST00000346213 OR8I2Q8N0Y5 310 aa11.78□□□□□ -0.52
RAB5C-201ENST00000346213 EXOC3-AS1Q8N2X6 119 aa11.78□□□□□ -0.52
RAB5C-201ENST00000346213 BUB3O43684 328 aa11.77□□□□□ -0.53
RAB5C-201ENST00000346213 PSG9Q00887 426 aa11.77□□□□□ -0.53
RAB5C-201ENST00000346213 OR5I1Q13606 314 aa11.77□□□□□ -0.53
RAB5C-201ENST00000346213 ZFP82Q8N141 532 aa11.77□□□□□ -0.53
RAB5C-201ENST00000346213 BTF3L4Q96K17 158 aa11.77□□□□□ -0.53
RAB5C-201ENST00000346213 GPR82Q96P67 336 aa11.77□□□□□ -0.53
RAB5C-201ENST00000346213 TRBV6-1A0A0K0K1D8 114 aa11.76□□□□□ -0.53
RAB5C-201ENST00000346213 KNCNA6PVL3 124 aa11.76□□□□□ -0.53
RAB5C-201ENST00000346213 SLC17A3O00476 420 aa11.76□□□□□ -0.53
RAB5C-201ENST00000346213 ZNF253O75346 499 aa11.76□□□□□ -0.53
RAB5C-201ENST00000346213 ZNF688P0C7X2 276 aa11.76□□□□□ -0.53
RAB5C-201ENST00000346213 ERVFC1-1P60608 527 aa11.76□□□□□ -0.53
RAB5C-201ENST00000346213 RPL11P62913 178 aaKnown RBP11.76□□□□□ -0.53
RAB5C-201ENST00000346213 C1orf194Q5T5A4 169 aa11.76□□□□□ -0.53
RAB5C-201ENST00000346213 ARL6IP6Q8N6S5 226 aa11.76□□□□□ -0.53
RAB5C-201ENST00000346213 IL36BQ9NZH7 164 aa11.76□□□□□ -0.53
RAB5C-201ENST00000346213 RPH3ALQ9UNE2 315 aa11.76□□□□□ -0.53
RAB5C-201ENST00000346213 V9GYV3 84 aa11.76□□□□□ -0.53
RAB5C-201ENST00000346213 ALMS1Q8TCU4 4167 aa11.75□□□□□ -0.53
RAB5C-201ENST00000346213 MGST1P10620 155 aaKnown RBP11.75□□□□□ -0.53
RAB5C-201ENST00000346213 FAM231DQ6ZW35 169 aa11.75□□□□□ -0.53
RAB5C-201ENST00000346213 MLST8Q9BVC4 326 aa11.75□□□□□ -0.53
RAB5C-201ENST00000346213 AAMDCQ9H7C9 122 aa11.75□□□□□ -0.53
RAB5C-201ENST00000346213 TRAV9-1A0A075B6T8 112 aa11.75□□□□□ -0.53
RAB5C-201ENST00000346213 A0A087X0K7 114 aa11.75□□□□□ -0.53
RAB5C-201ENST00000346213 A0A1W2PPQ1 181 aa11.75□□□□□ -0.53
RAB5C-201ENST00000346213 TYMSP04818 313 aa11.75□□□□□ -0.53
RAB5C-201ENST00000346213 RNF183Q96D59 192 aa11.75□□□□□ -0.53
RAB5C-201ENST00000346213 TRAV2A0A0B4J234 112 aa11.74□□□□□ -0.53
RAB5C-201ENST00000346213 A0A0J9YWU9 116 aa11.74□□□□□ -0.53
RAB5C-201ENST00000346213 LTAP01374 205 aa11.74□□□□□ -0.53
RAB5C-201ENST00000346213 FAM3BP58499 235 aaPredicted RBP11.74□□□□□ -0.53
RAB5C-201ENST00000346213 IBA57Q5T440 356 aaKnown RBP11.74□□□□□ -0.53
RAB5C-201ENST00000346213 GOLT1AQ6ZVE7 132 aa11.74□□□□□ -0.53
RAB5C-201ENST00000346213 TMEM75Q8N9X5 138 aa11.74□□□□□ -0.53
RAB5C-201ENST00000346213 RNASE7Q9H1E1 156 aaKnown RBP11.74□□□□□ -0.53
RAB5C-201ENST00000346213 KIR2DL5BA0A0G2JN68 375 aa11.73□□□□□ -0.53
RAB5C-201ENST00000346213 KIR2DL5BA0A0G2JPC4 375 aa11.73□□□□□ -0.53
RAB5C-201ENST00000346213 SPRY2O43597 315 aa11.73□□□□□ -0.53
RAB5C-201ENST00000346213 HOXA5P20719 270 aa11.73□□□□□ -0.53
RAB5C-201ENST00000346213 S100A2P29034 98 aa11.73□□□□□ -0.53
RAB5C-201ENST00000346213 Q6ZWC4 215 aa11.73□□□□□ -0.53
RAB5C-201ENST00000346213 KIR2DL5AQ8N109 375 aa11.73□□□□□ -0.53
RAB5C-201ENST00000346213 NHLRC2Q8NBF2 726 aa11.73□□□□□ -0.53
RAB5C-201ENST00000346213 KIR2DL5BQ8NHK3 375 aa11.73□□□□□ -0.53
RAB5C-201ENST00000346213 SERTM2A0A1B0GWG4 89 aa11.72□□□□□ -0.53
RAB5C-201ENST00000346213 A0A1W2PS18 150 aa11.72□□□□□ -0.53
RAB5C-201ENST00000346213 DIRC3C9JPN6 131 aa11.72□□□□□ -0.53
RAB5C-201ENST00000346213 K7EQM0 130 aa11.72□□□□□ -0.53
RAB5C-201ENST00000346213 SOCS3O14543 225 aa11.72□□□□□ -0.53
RAB5C-201ENST00000346213 IGLV2-11P01706 119 aa11.72□□□□□ -0.53
RAB5C-201ENST00000346213 RAB4AP20338 218 aa11.72□□□□□ -0.53
RAB5C-201ENST00000346213 Q86TA4 180 aa11.72□□□□□ -0.53
RAB5C-201ENST00000346213 TRPT1Q86TN4 253 aaKnown RBP11.72□□□□□ -0.53
RAB5C-201ENST00000346213 SGK494Q96LW2 274 aa11.72□□□□□ -0.53
RAB5C-201ENST00000346213 C2orf88Q9BSF0 95 aa11.72□□□□□ -0.53
RAB5C-201ENST00000346213 AGRNO00468 2067 aa11.72□□□□□ -0.53
RAB5C-201ENST00000346213 TRGC2P03986 189 aa11.71□□□□□ -0.53
RAB5C-201ENST00000346213 CSN1S1P47710 185 aa11.71□□□□□ -0.53
RAB5C-201ENST00000346213 APOC4P55056 127 aa11.71□□□□□ -0.53
RAB5C-201ENST00000346213 GDF5OSQ5U4N7 250 aa11.71□□□□□ -0.53
RAB5C-201ENST00000346213 M0R3E3 92 aa11.71□□□□□ -0.54
RAB5C-201ENST00000346213 BMI1P35226 326 aa11.71□□□□□ -0.54
RAB5C-201ENST00000346213 PKIAP61925 76 aa11.71□□□□□ -0.54
RAB5C-201ENST00000346213 PAFAH1B2P68402 229 aa11.71□□□□□ -0.54
RAB5C-201ENST00000346213 PSG3Q16557 428 aa11.71□□□□□ -0.54
RAB5C-201ENST00000346213 PSMG4Q5JS54 123 aa11.71□□□□□ -0.54
RAB5C-201ENST00000346213 TMEM183AQ8IXX5 376 aa11.71□□□□□ -0.54
RAB5C-201ENST00000346213 GRAMD2BQ96HH9 432 aa11.71□□□□□ -0.54
RAB5C-201ENST00000346213 CSTL1Q9H114 145 aa11.71□□□□□ -0.54
RAB5C-201ENST00000346213 ZNF331Q9NQX6 463 aaPredicted RBP11.71□□□□□ -0.54
RAB5C-201ENST00000346213 ZNF492Q9P255 531 aa11.71□□□□□ -0.54
RAB5C-201ENST00000346213 TP53TG1Q9Y2A0 90 aa11.71□□□□□ -0.54
RAB5C-201ENST00000346213 PHOX2AO14813 284 aa11.7□□□□□ -0.54
RAB5C-201ENST00000346213 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.7□□□□□ -0.54
RAB5C-201ENST00000346213 NUDT10Q8NFP7 164 aa11.7□□□□□ -0.54
RAB5C-201ENST00000346213 NUDT11Q96G61 164 aa11.7□□□□□ -0.54
RAB5C-201ENST00000346213 SLC50A1Q9BRV3 221 aa11.7□□□□□ -0.54
RAB5C-201ENST00000346213 PSG8Q9UQ74 426 aa11.7□□□□□ -0.54
RAB5C-201ENST00000346213 ZFP30Q9Y2G7 519 aa11.7□□□□□ -0.54
RAB5C-201ENST00000346213 TRAV8-1A0A0A6YYK1 113 aa11.69□□□□□ -0.54
RAB5C-201ENST00000346213 FBLL1A6NHQ2 334 aaKnown RBP11.69□□□□□ -0.54
RAB5C-201ENST00000346213 ZNF705GA8MUZ8 300 aaPredicted RBP11.69□□□□□ -0.54
RAB5C-201ENST00000346213 TSTD3H0UI37 97 aa11.69□□□□□ -0.54
RAB5C-201ENST00000346213 CA1P00915 261 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms