RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 C15orf53Q8NAA6 179 aa13.94□□□□□ -0.18
CLTA-202ENST00000345519 SERTM2A0A1B0GWG4 89 aa13.93□□□□□ -0.18
CLTA-202ENST00000345519 SNURFLB1AK76 121 aa13.93□□□□□ -0.18
CLTA-202ENST00000345519 RNASE4P34096 147 aaKnown RBP13.93□□□□□ -0.18
CLTA-202ENST00000345519 TCL1AP56279 114 aa13.93□□□□□ -0.18
CLTA-202ENST00000345519 KCNRGQ8N5I3 272 aa13.93□□□□□ -0.18
CLTA-202ENST00000345519 OR11H4Q8NGC9 324 aa13.93□□□□□ -0.18
CLTA-202ENST00000345519 ACTR3CQ9C0K3 210 aaPredicted RBP13.93□□□□□ -0.18
CLTA-202ENST00000345519 TMEM167BQ9NRX6 74 aa13.93□□□□□ -0.18
CLTA-202ENST00000345519 CTXND1A0A1B0GTU2 59 aa13.92□□□□□ -0.18
CLTA-202ENST00000345519 SMLR1H3BR10 107 aa13.92□□□□□ -0.18
CLTA-202ENST00000345519 Q6ZQT7 251 aa13.92□□□□□ -0.18
CLTA-202ENST00000345519 POM121L12Q8N7R1 296 aa13.92□□□□□ -0.18
CLTA-202ENST00000345519 C5orf17Q8NAS9 161 aa13.92□□□□□ -0.18
CLTA-202ENST00000345519 CMTM2Q8TAZ6 248 aa13.92□□□□□ -0.18
CLTA-202ENST00000345519 GGTLC3B5MD39 225 aa13.91□□□□□ -0.18
CLTA-202ENST00000345519 HTN3P15516 51 aa13.91□□□□□ -0.18
CLTA-202ENST00000345519 TDRG1Q3Y452 100 aa13.91□□□□□ -0.18
CLTA-202ENST00000345519 HYLS1Q96M11 299 aa13.91□□□□□ -0.18
CLTA-202ENST00000345519 TP53TG3Q9ULZ0 132 aa13.91□□□□□ -0.18
CLTA-202ENST00000345519 IGHV1OR15-1A0A075B7D0 117 aa13.9□□□□□ -0.18
CLTA-202ENST00000345519 A0A1W2PRE2 83 aa13.9□□□□□ -0.18
CLTA-202ENST00000345519 SPINK4O60575 86 aa13.9□□□□□ -0.18
CLTA-202ENST00000345519 RNF212Q495C1 297 aa13.9□□□□□ -0.18
CLTA-202ENST00000345519 GOLT1AQ6ZVE7 132 aa13.9□□□□□ -0.18
CLTA-202ENST00000345519 ARPC5LQ9BPX5 153 aa13.9□□□□□ -0.18
CLTA-202ENST00000345519 TCRAP04437 139 aa13.89□□□□□ -0.19
CLTA-202ENST00000345519 GNG5P63218 68 aa13.89□□□□□ -0.19
CLTA-202ENST00000345519 TVP23CQ96ET8 276 aa13.89□□□□□ -0.19
CLTA-202ENST00000345519 GSN-AS1Q9NRJ2 163 aa13.89□□□□□ -0.19
CLTA-202ENST00000345519 KLF12Q9Y4X4 402 aa13.89□□□□□ -0.19
CLTA-202ENST00000345519 PKD1P98161 4303 aa13.88□□□□□ -0.19
CLTA-202ENST00000345519 H3BNG1 76 aa13.88□□□□□ -0.19
CLTA-202ENST00000345519 RGS13O14921 159 aa13.88□□□□□ -0.19
CLTA-202ENST00000345519 IGLV2-11P01706 119 aa13.88□□□□□ -0.19
CLTA-202ENST00000345519 LGALS9BQ3B8N2 356 aa13.88□□□□□ -0.19
CLTA-202ENST00000345519 Q6ZTI0 123 aa13.88□□□□□ -0.19
CLTA-202ENST00000345519 TRAV8-1A0A0A6YYK1 113 aa13.87□□□□□ -0.19
CLTA-202ENST00000345519 A0A0D9SG52 128 aa13.87□□□□□ -0.19
CLTA-202ENST00000345519 AKR1C8PQ5T2L2 129 aa13.87□□□□□ -0.19
CLTA-202ENST00000345519 GAGE12BA1L429 117 aa13.86□□□□□ -0.19
CLTA-202ENST00000345519 FBLL1A6NHQ2 334 aaKnown RBP13.86□□□□□ -0.19
CLTA-202ENST00000345519 F5H768 121 aa13.86□□□□□ -0.19
CLTA-202ENST00000345519 GAGE7O76087 117 aa13.86□□□□□ -0.19
CLTA-202ENST00000345519 SEC11BP0C7V7 166 aa13.86□□□□□ -0.19
CLTA-202ENST00000345519 GAGE12FP0CL80 117 aa13.86□□□□□ -0.19
CLTA-202ENST00000345519 GAGE12GP0CL81 117 aa13.86□□□□□ -0.19
CLTA-202ENST00000345519 GAGE12IP0CL82 117 aa13.86□□□□□ -0.19
CLTA-202ENST00000345519 HOXA5P20719 270 aa13.86□□□□□ -0.19
CLTA-202ENST00000345519 FAM3BP58499 235 aaPredicted RBP13.86□□□□□ -0.19
CLTA-202ENST00000345519 TMEM75Q8N9X5 138 aa13.86□□□□□ -0.19
CLTA-202ENST00000345519 EPDR1Q9UM22 224 aa13.86□□□□□ -0.19
CLTA-202ENST00000345519 BCL2L11O43521 198 aa13.85□□□□□ -0.19
CLTA-202ENST00000345519 CYB561D1Q8N8Q1 229 aa13.85□□□□□ -0.19
CLTA-202ENST00000345519 ATG101Q9BSB4 218 aa13.85□□□□□ -0.19
CLTA-202ENST00000345519 TMPRSS5Q9H3S3 457 aa13.85□□□□□ -0.19
CLTA-202ENST00000345519 RPH3ALQ9UNE2 315 aa13.85□□□□□ -0.19
CLTA-202ENST00000345519 PKHD1P08F94 4074 aa13.84□□□□□ -0.19
CLTA-202ENST00000345519 SUMO1P63165 101 aaKnown RBP13.84□□□□□ -0.19
CLTA-202ENST00000345519 ZNF415Q09FC8 603 aa13.84□□□□□ -0.19
CLTA-202ENST00000345519 NKX6-2Q9C056 277 aaPredicted RBP13.84□□□□□ -0.19
CLTA-202ENST00000345519 ARL2-SNX15V9GYD0 113 aa13.84□□□□□ -0.19
CLTA-202ENST00000345519 TRAV21A0A0B4J279 112 aa13.83□□□□□ -0.2
CLTA-202ENST00000345519 FAM74A7A6NL05 159 aa13.83□□□□□ -0.2
CLTA-202ENST00000345519 K7EQM0 130 aa13.83□□□□□ -0.2
CLTA-202ENST00000345519 TREM1Q9NP99 234 aa13.83□□□□□ -0.2
CLTA-202ENST00000345519 MAP1LC3B2A6NCE7 125 aa13.82□□□□□ -0.2
CLTA-202ENST00000345519 UMAD1C9J7I0 102 aa13.82□□□□□ -0.2
CLTA-202ENST00000345519 FAM159AQ6UWV7 190 aa13.82□□□□□ -0.2
CLTA-202ENST00000345519 Q6ZNX1 250 aa13.82□□□□□ -0.2
CLTA-202ENST00000345519 Q6ZR54 194 aa13.82□□□□□ -0.2
CLTA-202ENST00000345519 TCTE3Q8IZS6 198 aa13.82□□□□□ -0.2
CLTA-202ENST00000345519 MAP1LC3BQ9GZQ8 125 aa13.82□□□□□ -0.2
CLTA-202ENST00000345519 MDFICQ9P1T7 246 aa13.82□□□□□ -0.2
CLTA-202ENST00000345519 PSG8Q9UQ74 426 aa13.82□□□□□ -0.2
CLTA-202ENST00000345519 TRGV11A0A075B6L2 103 aa13.81□□□□□ -0.2
CLTA-202ENST00000345519 TRGV1A0A0A0MS02 117 aa13.81□□□□□ -0.2
CLTA-202ENST00000345519 FLI1Q01543 452 aaPredicted RBP13.81□□□□□ -0.2
CLTA-202ENST00000345519 MUC21Q5SSG8 566 aa13.81□□□□□ -0.2
CLTA-202ENST00000345519 STOML3Q8TAV4 291 aa13.81□□□□□ -0.2
CLTA-202ENST00000345519 RASL10AQ92737 203 aa13.81□□□□□ -0.2
CLTA-202ENST00000345519 TCEAL7Q9BRU2 100 aa13.81□□□□□ -0.2
CLTA-202ENST00000345519 NDFIP1Q9BT67 221 aa13.81□□□□□ -0.2
CLTA-202ENST00000345519 TRAV26-1A0A087WT03 109 aa13.8□□□□□ -0.2
CLTA-202ENST00000345519 KANTRA0A1W2PQU2 76 aa13.8□□□□□ -0.2
CLTA-202ENST00000345519 F6UZH7 168 aa13.8□□□□□ -0.2
CLTA-202ENST00000345519 FHITP49789 147 aa13.8□□□□□ -0.2
CLTA-202ENST00000345519 FGF8P55075 233 aaPredicted RBP13.8□□□□□ -0.2
CLTA-202ENST00000345519 DPPA3Q6W0C5 159 aa13.8□□□□□ -0.2
CLTA-202ENST00000345519 MBD3L1Q8WWY6 194 aa13.8□□□□□ -0.2
CLTA-202ENST00000345519 HIST1H2BAQ96A08 127 aa13.8□□□□□ -0.2
CLTA-202ENST00000345519 SPXQ9BT56 116 aa13.8□□□□□ -0.2
CLTA-202ENST00000345519 TRGV2A0A075B6R0 118 aa13.79□□□□□ -0.2
CLTA-202ENST00000345519 IGHV3-16A0A0C4DH30 117 aa13.79□□□□□ -0.2
CLTA-202ENST00000345519 ZNF80P51504 273 aaPredicted RBP13.79□□□□□ -0.2
CLTA-202ENST00000345519 COX8CQ7Z4L0 72 aa13.79□□□□□ -0.2
CLTA-202ENST00000345519 VSIG2Q96IQ7 327 aa13.79□□□□□ -0.2
CLTA-202ENST00000345519 C8orf49Q96NF6 230 aa13.79□□□□□ -0.2
CLTA-202ENST00000345519 TYMSP04818 313 aa13.78□□□□□ -0.2
CLTA-202ENST00000345519 PFN1P07737 140 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms