RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 ZFAND6Q6FIF0 208 aa14.99□□□□□ -0.01
SMARCB1-202ENST00000344921 ZFAND2AQ8N6M9 145 aa14.99□□□□□ -0.01
SMARCB1-202ENST00000344921 LENEPQ9Y5L5 61 aa14.99□□□□□ -0.01
SMARCB1-202ENST00000344921 C3orf84H3BNL1 204 aa14.98□□□□□ -0.01
SMARCB1-202ENST00000344921 PPT1P50897 306 aa14.98□□□□□ -0.01
SMARCB1-202ENST00000344921 PMS2P11Q13670 270 aa14.98□□□□□ -0.01
SMARCB1-202ENST00000344921 NDFIP1Q9BT67 221 aa14.97□□□□□ -0.01
SMARCB1-202ENST00000344921 ARL2-SNX15V9GYD0 113 aa14.97□□□□□ -0.01
SMARCB1-202ENST00000344921 CXorf65A6NEN9 183 aa14.97□□□□□ -0.01
SMARCB1-202ENST00000344921 HIST1H2BAQ96A08 127 aa14.97□□□□□ -0.01
SMARCB1-202ENST00000344921 TREM1Q9NP99 234 aa14.97□□□□□ -0.01
SMARCB1-202ENST00000344921 TRAV1-1A0A0B4J248 108 aa14.96□□□□□ -0.01
SMARCB1-202ENST00000344921 F6UZH7 168 aa14.96□□□□□ -0.01
SMARCB1-202ENST00000344921 PEX7O00628 323 aa14.96□□□□□ -0.01
SMARCB1-202ENST00000344921 ATP5G3P48201 142 aa14.96□□□□□ -0.01
SMARCB1-202ENST00000344921 NANOS2P60321 138 aaKnown RBP14.96□□□□□ -0.01
SMARCB1-202ENST00000344921 FLI1Q01543 452 aaPredicted RBP14.96□□□□□ -0.01
SMARCB1-202ENST00000344921 PRR9Q5T870 116 aa14.96□□□□□ -0.01
SMARCB1-202ENST00000344921 GNG13Q9P2W3 67 aa14.96□□□□□ -0.01
SMARCB1-202ENST00000344921 PSG8Q9UQ74 426 aa14.96□□□□□ -0.01
SMARCB1-202ENST00000344921 AZU1P20160 251 aa14.95□□□□□ -0.02
SMARCB1-202ENST00000344921 CCL20P78556 96 aa14.95□□□□□ -0.02
SMARCB1-202ENST00000344921 PRNTQ86SH4 94 aa14.95□□□□□ -0.02
SMARCB1-202ENST00000344921 TMEM75Q8N9X5 138 aa14.95□□□□□ -0.02
SMARCB1-202ENST00000344921 PYGO2Q9BRQ0 406 aa14.95□□□□□ -0.02
SMARCB1-202ENST00000344921 TRAV34A0A0B4J273 112 aa14.95□□□□□ -0.02
SMARCB1-202ENST00000344921 ZNF324O75467 553 aaPredicted RBP14.95□□□□□ -0.02
SMARCB1-202ENST00000344921 LINC00479Q96M42 142 aa14.95□□□□□ -0.02
SMARCB1-202ENST00000344921 MANBALQ9NQG1 85 aa14.95□□□□□ -0.02
SMARCB1-202ENST00000344921 FBLL1A6NHQ2 334 aaKnown RBP14.94□□□□□ -0.02
SMARCB1-202ENST00000344921 C16orf74Q96GX8 76 aa14.94□□□□□ -0.02
SMARCB1-202ENST00000344921 CELA1Q9UNI1 258 aa14.94□□□□□ -0.02
SMARCB1-202ENST00000344921 DNAH7Q8WXX0 4024 aa14.94□□□□□ -0.02
SMARCB1-202ENST00000344921 SPART-AS1P0CW21 52 aa14.93□□□□□ -0.02
SMARCB1-202ENST00000344921 CASC10Q5T4H9 136 aa14.93□□□□□ -0.02
SMARCB1-202ENST00000344921 TVP23CQ96ET8 276 aa14.93□□□□□ -0.02
SMARCB1-202ENST00000344921 TCEAL7Q9BRU2 100 aa14.93□□□□□ -0.02
SMARCB1-202ENST00000344921 C11orf94C9JXX5 98 aa14.92□□□□□ -0.02
SMARCB1-202ENST00000344921 IGLV2-11P01706 119 aa14.92□□□□□ -0.02
SMARCB1-202ENST00000344921 UBE2G1P62253 170 aa14.92□□□□□ -0.02
SMARCB1-202ENST00000344921 BLOC1S1P78537 153 aa14.92□□□□□ -0.02
SMARCB1-202ENST00000344921 FAM222AQ5U5X8 452 aa14.92□□□□□ -0.02
SMARCB1-202ENST00000344921 ZNF493Q6ZR52 646 aa14.92□□□□□ -0.02
SMARCB1-202ENST00000344921 TMEM263Q8WUH6 116 aaKnown RBP14.92□□□□□ -0.02
SMARCB1-202ENST00000344921 CBY3A6NI87 242 aa14.92□□□□□ -0.02
SMARCB1-202ENST00000344921 SCO1O75880 301 aa14.92□□□□□ -0.02
SMARCB1-202ENST00000344921 Q6ZQT7 251 aa14.92□□□□□ -0.02
SMARCB1-202ENST00000344921 IFNA1P01562 189 aa14.91□□□□□ -0.02
SMARCB1-202ENST00000344921 SAPCD1Q5SSQ6 148 aa14.91□□□□□ -0.02
SMARCB1-202ENST00000344921 C8orf49Q96NF6 230 aa14.91□□□□□ -0.02
SMARCB1-202ENST00000344921 DKK2Q9UBU2 259 aa14.91□□□□□ -0.02
SMARCB1-202ENST00000344921 TEX48A0A1B0GUV7 120 aa14.9□□□□□ -0.02
SMARCB1-202ENST00000344921 AKR1C3P42330 323 aa14.9□□□□□ -0.02
SMARCB1-202ENST00000344921 Q6AWC8 147 aa14.9□□□□□ -0.02
SMARCB1-202ENST00000344921 RNASE8Q8TDE3 154 aaKnown RBP14.9□□□□□ -0.02
SMARCB1-202ENST00000344921 IGHV1OR15-1A0A075B7D0 117 aa14.89□□□□□ -0.03
SMARCB1-202ENST00000344921 MUC21Q5SSG8 566 aa14.89□□□□□ -0.03
SMARCB1-202ENST00000344921 PHLDA1Q8WV24 401 aaPredicted RBP14.89□□□□□ -0.03
SMARCB1-202ENST00000344921 FMC1Q96HJ9 113 aa14.89□□□□□ -0.03
SMARCB1-202ENST00000344921 NAGKQ9UJ70 344 aa14.89□□□□□ -0.03
SMARCB1-202ENST00000344921 TRAV21A0A0B4J279 112 aa14.89□□□□□ -0.03
SMARCB1-202ENST00000344921 SNURFLB1AK76 121 aa14.89□□□□□ -0.03
SMARCB1-202ENST00000344921 FAM159AQ6UWV7 190 aa14.89□□□□□ -0.03
SMARCB1-202ENST00000344921 TIMM8BQ9Y5J9 83 aaPredicted RBP14.89□□□□□ -0.03
SMARCB1-202ENST00000344921 SCO2A0A1W2PP80 73 aa14.88□□□□□ -0.03
SMARCB1-202ENST00000344921 GCGP01275 180 aa14.88□□□□□ -0.03
SMARCB1-202ENST00000344921 C12orf74Q32Q52 190 aa14.88□□□□□ -0.03
SMARCB1-202ENST00000344921 Q6ZTC4 211 aa14.88□□□□□ -0.03
SMARCB1-202ENST00000344921 PLAC8L1A1L4L8 177 aa14.87□□□□□ -0.03
SMARCB1-202ENST00000344921 NUPR2A6NF83 97 aa14.87□□□□□ -0.03
SMARCB1-202ENST00000344921 Q86TA4 180 aa14.87□□□□□ -0.03
SMARCB1-202ENST00000344921 PCNPQ8WW12 178 aaKnown RBP14.87□□□□□ -0.03
SMARCB1-202ENST00000344921 LINC00467Q9BRT7 94 aa14.87□□□□□ -0.03
SMARCB1-202ENST00000344921 NOP10Q9NPE3 64 aaKnown RBP14.87□□□□□ -0.03
SMARCB1-202ENST00000344921 LYRM9A8MSI8 78 aa14.86□□□□□ -0.03
SMARCB1-202ENST00000344921 DAD1P61803 113 aa14.86□□□□□ -0.03
SMARCB1-202ENST00000344921 ANXA2RQ3ZCQ2 193 aa14.86□□□□□ -0.03
SMARCB1-202ENST00000344921 TXNDC17Q9BRA2 123 aa14.86□□□□□ -0.03
SMARCB1-202ENST00000344921 TP53TG3Q9ULZ0 132 aa14.86□□□□□ -0.03
SMARCB1-202ENST00000344921 DEFB130BP0DP73 79 aa14.86□□□□□ -0.03
SMARCB1-202ENST00000344921 DEFB130AP0DP74 79 aa14.86□□□□□ -0.03
SMARCB1-202ENST00000344921 ZFP30Q9Y2G7 519 aa14.86□□□□□ -0.03
SMARCB1-202ENST00000344921 KLF12Q9Y4X4 402 aa14.86□□□□□ -0.03
SMARCB1-202ENST00000344921 CSMD3Q7Z407 3707 aa14.85□□□□□ -0.03
SMARCB1-202ENST00000344921 BCL2P10415 239 aa14.85□□□□□ -0.03
SMARCB1-202ENST00000344921 MEF2BQ02080 365 aaPredicted RBP14.85□□□□□ -0.03
SMARCB1-202ENST00000344921 TMEM183BQ1AE95 376 aa14.85□□□□□ -0.03
SMARCB1-202ENST00000344921 CEMP1Q6PRD7 247 aaPredicted RBP14.85□□□□□ -0.03
SMARCB1-202ENST00000344921 GSN-AS1Q9NRJ2 163 aa14.85□□□□□ -0.03
SMARCB1-202ENST00000344921 S100A9P06702 114 aaKnown RBP14.84□□□□□ -0.03
SMARCB1-202ENST00000344921 ZNF80P51504 273 aaPredicted RBP14.84□□□□□ -0.03
SMARCB1-202ENST00000344921 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.84□□□□□ -0.03
SMARCB1-202ENST00000344921 C2CD4CQ8TF44 421 aa14.84□□□□□ -0.03
SMARCB1-202ENST00000344921 KLK5Q9Y337 293 aaPredicted RBP14.84□□□□□ -0.03
SMARCB1-202ENST00000344921 TRAV10A0A0B4J240 114 aa14.83□□□□□ -0.03
SMARCB1-202ENST00000344921 PFN1P07737 140 aaKnown RBP14.83□□□□□ -0.03
SMARCB1-202ENST00000344921 TAGLN2P37802 199 aaKnown RBP14.83□□□□□ -0.03
SMARCB1-202ENST00000344921 UQCC3Q6UW78 93 aa14.83□□□□□ -0.03
SMARCB1-202ENST00000344921 VAX2Q9UIW0 290 aa14.83□□□□□ -0.03
SMARCB1-202ENST00000344921 TMEM183AQ8IXX5 376 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms