RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 JKAMPQ9P055 326 aa9.8□□□□□ -0.84
LMX1A-202ENST00000342310 AGRNO00468 2067 aa9.8□□□□□ -0.84
LMX1A-202ENST00000342310 TRAV30A0A087WSZ9 112 aa9.8□□□□□ -0.84
LMX1A-202ENST00000342310 KIR3DS1Q14943 382 aa9.8□□□□□ -0.84
LMX1A-202ENST00000342310 HIST2H2BDQ6DRA6 164 aa9.8□□□□□ -0.84
LMX1A-202ENST00000342310 ZNF562Q6V9R5 426 aa9.8□□□□□ -0.84
LMX1A-202ENST00000342310 METTL26Q96S19 204 aa9.8□□□□□ -0.84
LMX1A-202ENST00000342310 MAP1LC3AQ9H492 121 aa9.8□□□□□ -0.84
LMX1A-202ENST00000342310 IGHV2-70DA0A0C4DH43 119 aa9.79□□□□□ -0.84
LMX1A-202ENST00000342310 C19orf71A6NCJ1 209 aa9.79□□□□□ -0.84
LMX1A-202ENST00000342310 PRTN3P24158 256 aa9.79□□□□□ -0.84
LMX1A-202ENST00000342310 BMI1P35226 326 aa9.79□□□□□ -0.84
LMX1A-202ENST00000342310 ZNF502Q8TBZ5 544 aa9.79□□□□□ -0.84
LMX1A-202ENST00000342310 FABP5P3A8MUU1 101 aa9.79□□□□□ -0.84
LMX1A-202ENST00000342310 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.79□□□□□ -0.84
LMX1A-202ENST00000342310 TNFRSF14Q92956 283 aa9.79□□□□□ -0.84
LMX1A-202ENST00000342310 CHCHD1Q96BP2 118 aaKnown RBP9.79□□□□□ -0.84
LMX1A-202ENST00000342310 A0A1B0GXF2 115 aa9.79□□□□□ -0.84
LMX1A-202ENST00000342310 CTSGP08311 255 aa9.79□□□□□ -0.84
LMX1A-202ENST00000342310 EFNA4P52798 201 aa9.79□□□□□ -0.84
LMX1A-202ENST00000342310 OR1N2Q8NGR9 330 aa9.79□□□□□ -0.84
LMX1A-202ENST00000342310 OR2K2Q8NGT1 345 aa9.79□□□□□ -0.84
LMX1A-202ENST00000342310 A0A0G2JLM5 398 aa9.78□□□□□ -0.84
LMX1A-202ENST00000342310 KLRB1Q12918 225 aa9.78□□□□□ -0.84
LMX1A-202ENST00000342310 KLF12Q9Y4X4 402 aa9.78□□□□□ -0.84
LMX1A-202ENST00000342310 FSTL3O95633 263 aa9.78□□□□□ -0.84
LMX1A-202ENST00000342310 IGLV2-11P01706 119 aa9.78□□□□□ -0.84
LMX1A-202ENST00000342310 HBDP02042 147 aa9.78□□□□□ -0.84
LMX1A-202ENST00000342310 IGF1P05019 195 aa9.78□□□□□ -0.84
LMX1A-202ENST00000342310 RNASE4P34096 147 aaKnown RBP9.78□□□□□ -0.84
LMX1A-202ENST00000342310 MYCNOSP40205 109 aa9.78□□□□□ -0.84
LMX1A-202ENST00000342310 ADORA2A-AS1P86434 159 aa9.78□□□□□ -0.84
LMX1A-202ENST00000342310 RASL11AQ6T310 242 aa9.78□□□□□ -0.84
LMX1A-202ENST00000342310 AMTNQ6UX39 209 aa9.78□□□□□ -0.84
LMX1A-202ENST00000342310 TMEM158Q8WZ71 300 aa9.78□□□□□ -0.84
LMX1A-202ENST00000342310 ZNF747Q9BV97 191 aa9.78□□□□□ -0.84
LMX1A-202ENST00000342310 FABP2P12104 132 aa9.77□□□□□ -0.84
LMX1A-202ENST00000342310 TMEM95Q3KNT9 176 aa9.77□□□□□ -0.84
LMX1A-202ENST00000342310 FAM104BQ5XKR9 115 aa9.77□□□□□ -0.84
LMX1A-202ENST00000342310 C14orf178Q8N769 122 aaPredicted RBP9.77□□□□□ -0.84
LMX1A-202ENST00000342310 PRSS22Q9GZN4 317 aa9.77□□□□□ -0.84
LMX1A-202ENST00000342310 IGHV7-81A0A0B4J1V7 117 aa9.77□□□□□ -0.85
LMX1A-202ENST00000342310 A0A1W2PPR1 153 aa9.77□□□□□ -0.85
LMX1A-202ENST00000342310 H7C2G1 150 aa9.77□□□□□ -0.85
LMX1A-202ENST00000342310 GNLYP22749 145 aa9.77□□□□□ -0.85
LMX1A-202ENST00000342310 PHLDA3Q9Y5J5 127 aa9.77□□□□□ -0.85
LMX1A-202ENST00000342310 C3orf36Q3SXR2 165 aa9.77□□□□□ -0.85
LMX1A-202ENST00000342310 PET117Q6UWS5 81 aa9.77□□□□□ -0.85
LMX1A-202ENST00000342310 LINC00477Q96M19 166 aa9.77□□□□□ -0.85
LMX1A-202ENST00000342310 C7orf69Q9H7B7 122 aa9.77□□□□□ -0.85
LMX1A-202ENST00000342310 LOC107984156A0A0G2JMH3 177 aa9.76□□□□□ -0.85
LMX1A-202ENST00000342310 ATP5G2Q06055 141 aa9.76□□□□□ -0.85
LMX1A-202ENST00000342310 ARL17AQ8IVW1 177 aa9.76□□□□□ -0.85
LMX1A-202ENST00000342310 HAX1O00165 279 aa9.76□□□□□ -0.85
LMX1A-202ENST00000342310 ATP5J2P56134 94 aa9.76□□□□□ -0.85
LMX1A-202ENST00000342310 ZC2HC1BQ5TFG8 222 aa9.76□□□□□ -0.85
LMX1A-202ENST00000342310 CFHR4Q92496 578 aa9.76□□□□□ -0.85
LMX1A-202ENST00000342310 JMJD8Q96S16 334 aa9.76□□□□□ -0.85
LMX1A-202ENST00000342310 ZNF492Q9P255 531 aa9.76□□□□□ -0.85
LMX1A-202ENST00000342310 TRBV12-3P01733 135 aa9.76□□□□□ -0.85
LMX1A-202ENST00000342310 MYOZ3Q8TDC0 251 aa9.76□□□□□ -0.85
LMX1A-202ENST00000342310 CELSR2Q9HCU4 2923 aa9.75□□□□□ -0.85
LMX1A-202ENST00000342310 CSMD2Q7Z408 3487 aa9.75□□□□□ -0.85
LMX1A-202ENST00000342310 KLF5Q13887 457 aaPredicted RBP9.75□□□□□ -0.85
LMX1A-202ENST00000342310 SCGB1D4Q6XE38 83 aa9.75□□□□□ -0.85
LMX1A-202ENST00000342310 HIST1H4GQ99525 98 aa9.75□□□□□ -0.85
LMX1A-202ENST00000342310 H3BUX3 64 aa9.74□□□□□ -0.85
LMX1A-202ENST00000342310 TNFRSF6BO95407 300 aa9.74□□□□□ -0.85
LMX1A-202ENST00000342310 C11orf44Q8N8P7 122 aa9.74□□□□□ -0.85
LMX1A-202ENST00000342310 AGPAT4-IT1Q9H0P7 198 aa9.74□□□□□ -0.85
LMX1A-202ENST00000342310 IGLV11-55A0A075B6I3 123 aa9.74□□□□□ -0.85
LMX1A-202ENST00000342310 CRYGBP07316 175 aa9.74□□□□□ -0.85
LMX1A-202ENST00000342310 DEFB125Q8N687 156 aa9.74□□□□□ -0.85
LMX1A-202ENST00000342310 IGHV3-64A0A075B6Q5 118 aa9.73□□□□□ -0.85
LMX1A-202ENST00000342310 BLCAPP62952 87 aa9.73□□□□□ -0.85
LMX1A-202ENST00000342310 EEF1AKMT3Q96AZ1 226 aa9.73□□□□□ -0.85
LMX1A-202ENST00000342310 A0A087WWL8 130 aa9.73□□□□□ -0.85
LMX1A-202ENST00000342310 CD5LO43866 347 aa9.73□□□□□ -0.85
LMX1A-202ENST00000342310 CDKN1BP46527 198 aa9.73□□□□□ -0.85
LMX1A-202ENST00000342310 DTX2Q86UW9 622 aa9.73□□□□□ -0.85
LMX1A-202ENST00000342310 ZNF418Q8TF45 676 aaPredicted RBP9.73□□□□□ -0.85
LMX1A-202ENST00000342310 ZNF256Q9Y2P7 627 aaPredicted RBP9.73□□□□□ -0.85
LMX1A-202ENST00000342310 NF1P21359 2839 aa9.73□□□□□ -0.85
LMX1A-202ENST00000342310 SMIM17P0DL12 118 aa9.73□□□□□ -0.85
LMX1A-202ENST00000342310 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
LMX1A-202ENST00000342310 TNFRSF13BO14836 293 aaPredicted RBP9.72□□□□□ -0.85
LMX1A-202ENST00000342310 SMIM13P0DJ93 91 aa9.72□□□□□ -0.85
LMX1A-202ENST00000342310 PAX8Q06710 450 aa9.72□□□□□ -0.85
LMX1A-202ENST00000342310 CT83Q5H943 113 aa9.72□□□□□ -0.85
LMX1A-202ENST00000342310 Q8N9W7 124 aa9.72□□□□□ -0.85
LMX1A-202ENST00000342310 TMEM14CQ9P0S9 112 aa9.72□□□□□ -0.85
LMX1A-202ENST00000342310 OVOL3O00110 214 aa9.72□□□□□ -0.85
LMX1A-202ENST00000342310 SRSF9Q13242 221 aaKnown RBP eCLIP9.72□□□□□ -0.85
LMX1A-202ENST00000342310 SAMD5Q5TGI4 173 aa9.72□□□□□ -0.85
LMX1A-202ENST00000342310 PIP4P2Q8N4L2 257 aa9.72□□□□□ -0.85
LMX1A-202ENST00000342310 GFRA4Q9GZZ7 299 aa9.72□□□□□ -0.85
LMX1A-202ENST00000342310 IGHV3-73A0A0B4J1V6 119 aa9.72□□□□□ -0.85
LMX1A-202ENST00000342310 APOMO95445 188 aa9.72□□□□□ -0.85
LMX1A-202ENST00000342310 C8orf86Q6ZUL3 223 aa9.72□□□□□ -0.85
LMX1A-202ENST00000342310 OR10J6PQ8NGY7 276 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms