RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 H3BVH4 76 aa7.79□□□□□ -1.16
RBFOX1-202ENST00000340209 FAM106AQ4KMX7 169 aa7.79□□□□□ -1.16
RBFOX1-202ENST00000340209 ZNF48Q96MX3 618 aaPredicted RBP7.79□□□□□ -1.16
RBFOX1-202ENST00000340209 GPX1P07203 203 aa7.79□□□□□ -1.16
RBFOX1-202ENST00000340209 SAPCD1Q5SSQ6 148 aa7.79□□□□□ -1.16
RBFOX1-202ENST00000340209 NIT1Q86X76 327 aa7.79□□□□□ -1.16
RBFOX1-202ENST00000340209 LYPD1Q8N2G4 141 aa7.79□□□□□ -1.16
RBFOX1-202ENST00000340209 ZNF664Q8N3J9 261 aa7.79□□□□□ -1.16
RBFOX1-202ENST00000340209 C20orf173Q96LM9 149 aa7.79□□□□□ -1.16
RBFOX1-202ENST00000340209 PRDM13Q9H4Q3 707 aa7.79□□□□□ -1.16
RBFOX1-202ENST00000340209 PEF1Q9UBV8 284 aaKnown RBP7.79□□□□□ -1.16
RBFOX1-202ENST00000340209 D6R8Y8 96 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 ZNF324O75467 553 aaPredicted RBP7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 PSMG4Q5JS54 123 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 OR10J6PQ8NGY7 276 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 PRSS22Q9GZN4 317 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 SPANXN1Q5VSR9 72 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 LINC00173Q6ZV60 143 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 FA2HQ7L5A8 372 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 VAMP8Q9BV40 100 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 SETXQ7Z333 2677 aaKnown RBP7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 J3QKU1 62 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 DPF1Q92782 380 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 ALKBH7Q9BT30 221 aaPredicted RBP7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 ZNF492Q9P255 531 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 RAB4AP20338 218 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 CKS2P33552 79 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 CYB5R2Q6BCY4 276 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 OR8A1Q8NGG7 326 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 VPREB3Q9UKI3 123 aa7.78□□□□□ -1.16
RBFOX1-202ENST00000340209 TRAV12-2A0A075B6T6 113 aa7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 FABP5P3A8MUU1 101 aa7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 NDUFS6O75380 124 aaKnown RBP7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 IGHG4P01861 327 aa7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 SLC50A1Q9BRV3 221 aa7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 TRAV26-2A0A0B4J265 109 aa7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 DDTP30046 118 aa7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 BMI1P35226 326 aa7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 SLURP1P55000 103 aa7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 SMR3AQ99954 134 aa7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 DAZ1Q9NQZ3 744 aaKnown RBP7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 TRAV8-2A0A0B4J237 113 aa7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 MGPP08493 103 aa7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 GATA1P15976 413 aaPredicted RBP7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 GATA3P23771 443 aa7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 C18orf15Q96N68 181 aa7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 POLR3KQ9Y2Y1 108 aaPredicted RBP7.77□□□□□ -1.17
RBFOX1-202ENST00000340209 BTF3P20290 206 aaKnown RBP7.76□□□□□ -1.17
RBFOX1-202ENST00000340209 COX19Q49B96 90 aa7.76□□□□□ -1.17
RBFOX1-202ENST00000340209 IGHV4OR15-8A0A075B7B6 117 aa7.76□□□□□ -1.17
RBFOX1-202ENST00000340209 A0A087WW49 117 aa7.76□□□□□ -1.17
RBFOX1-202ENST00000340209 C3orf79P0CE67 100 aa7.76□□□□□ -1.17
RBFOX1-202ENST00000340209 COA6Q5JTJ3 125 aaKnown RBP7.76□□□□□ -1.17
RBFOX1-202ENST00000340209 OR10AG1Q8NH19 301 aa7.76□□□□□ -1.17
RBFOX1-202ENST00000340209 USMG5Q96IX5 58 aa7.76□□□□□ -1.17
RBFOX1-202ENST00000340209 LOC102724200A0A096LPH7 203 aaPredicted RBP7.76□□□□□ -1.17
RBFOX1-202ENST00000340209 A8MWP6 167 aa7.76□□□□□ -1.17
RBFOX1-202ENST00000340209 PAFAH1B2P68402 229 aa7.76□□□□□ -1.17
RBFOX1-202ENST00000340209 NDUFA4O00483 81 aa7.75□□□□□ -1.17
RBFOX1-202ENST00000340209 PKIAP61925 76 aa7.75□□□□□ -1.17
RBFOX1-202ENST00000340209 PRELID3AQ96N28 172 aa7.75□□□□□ -1.17
RBFOX1-202ENST00000340209 IFI27P40305 119 aaPredicted RBP7.75□□□□□ -1.17
RBFOX1-202ENST00000340209 PRR9Q5T870 116 aa7.75□□□□□ -1.17
RBFOX1-202ENST00000340209 TMEM190Q8WZ59 177 aa7.75□□□□□ -1.17
RBFOX1-202ENST00000340209 C14orf144Q96I85 54 aa7.75□□□□□ -1.17
RBFOX1-202ENST00000340209 TP73-AS1Q9UF72 201 aa7.75□□□□□ -1.17
RBFOX1-202ENST00000340209 ATRQ13535 2644 aa7.75□□□□□ -1.17
RBFOX1-202ENST00000340209 TRAV12-3A0A0B4J271 114 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 GAS8-AS1O95177 125 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 LEPROTL1O95214 131 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 C16orf54Q6UWD8 224 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 KLHDC1Q8N7A1 406 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 KLHL30-AS1Q8NEE0 82 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 C11orf21Q9P2W6 132 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 IGHV7-4-1A0A0J9YVY3 117 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 LOXL1Q08397 574 aaPredicted RBP7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 Q0VG73 95 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 OR10J3Q5JRS4 329 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 PRSS57Q6UWY2 283 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 ATP5L2Q7Z4Y8 100 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 CR1P17927 2039 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 A0A1B0GXF2 115 aa7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 HOXD3P31249 432 aaPredicted RBP7.74□□□□□ -1.17
RBFOX1-202ENST00000340209 FAM74A4Q5TZK3 123 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 SNAI2O43623 268 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 SPATA45Q537H7 98 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 C9orf139Q6ZV77 190 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 SMIM15Q7Z3B0 74 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 OR11H1Q8NG94 326 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 LINC00614P0C842 121 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 AP5S1Q9NUS5 200 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 KLK9Q9UKQ9 250 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 IGHV3OR16-12A0A075B7B8 117 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 GNRH2O43555 120 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 PLA2G2AP14555 144 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 CT83Q5H943 113 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 SMIM12Q96EX1 92 aa7.73□□□□□ -1.17
RBFOX1-202ENST00000340209 F5H697 171 aa7.72□□□□□ -1.17
RBFOX1-202ENST00000340209 SPINK13Q1W4C9 94 aa7.72□□□□□ -1.17
RBFOX1-202ENST00000340209 DYNLRB2Q8TF09 96 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms